Summary

Gene Name	Calcoco2
Specie	Mus musculus
Full Name	calcium binding and coiled-coil domain 2
Also known as	2410154J16Rik|Ndp52|Ndp52l1
Coordinate	chr11:95989742-96015362
Strand	-
Gene summary	Predicted to enable protein homodimerization activity. Predicted to be involved in positive regulation of autophagosome maturation; response to interferon-gamma; and xenophagy. Predicted to act upstream of or within autophagy. Predicted to be located in cytosol; intracellular membrane-bounded organelle; and perinuclear region of cytoplasm. Predicted to be active in PML body and autophagosome. Orthologous to human CALCOCO2 (calcium binding and coiled-coil domain 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Calcoco2

Retroname	Coord	Strand	Genomic Region	ENSG
Calcoco2P2	chr13:62065330-62065962	+	Intergenic	ENSMUSG00000113887	UCSC
Calcoco2P3	chr13:62818115-62818747	-	Intergenic	ENSMUSG00000113473	UCSC
Calcoco2P4	chr16:20898410-20899344	+	Intergenic	ENSMUSG00000086936	UCSC
Calcoco2P1	chr2:144206635-144207601	-	Intergenic	ENSMUSG00000082313	UCSC

Expression

Transcript Sequences

>NM_001271018.1

GCTAGTGCTGCTGGCTGCTGTTCCTGGACTTCACCATGGACCAGTGCCCCATACCTACCTTGCTGGAACATGGCAACTTCTCTCAGGTCCTGTTTAACAATGTGGAGAAGTTCTATGCTCCTAGAGGAGATATCATGTGCTATTACACCCTCACTGAAAAGTTCATCCCTCGACGCAAGGACTGGATTGGCATCTTTAAAGTAGGGTGGAAGACCACTCAGGAGTATTATACCTTCATGTGGGCTCCCTTGCCAAAAGACCAAAACAAGGATTCAGCCACACAGCAGGAAATCCAATTCAAAGCTTATTACCTTCCCAAGGATGTGGAGCGCTACCAGTTCTGCTATGTGGATGAAGATGGTTTAGTCCGGGGAACAAGTGTCCCTTTCCAGTTTTGTCCAGACCCTGACGAGGACATAATGGTTGTTATCAATAAGGAAAAGGTAGAAGAGATGGAACAGCTCAGTGAGGAGCTTtaccaacaaaaccaggagctgaaaGACAAGTACGCTGACCTCCATGAGCAGCTACAGAGGAAGCAGGTGGCACTGGAAGCAACACAGAGGGTCAATAAGACCTTAGAACACAAAGTGGAAGAGAAGGCCtcctgggagaaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggaggaagagaaggcctcctgggagaaagagaaggcctcctgggaggaagagaaggcctcctgggagaaagagaaggccCCCTGGGAGGTAGAGAAGGCCCCCTGGAAGGAAGTGAAGGCCTATTGGTGGAATGATCTGCACCGGTGAGTGGGGGAAGGGCCACTCACTGTTAGCACTGCCTGTTCTGGTTTGGTATGATTGCACATCCCAGACTGAGGACcagaagtttaaggccatccttagctacacagtgaatctgaggccagcgtAGGCTACATGATGgcctgtcccaaaacaaaacaaagaaacccctgtctcaaaaggactCAGCCAAGTGgtcgtgcacacctttaatctcagcactagggaagctGGGACAGAAGGATTGCCCCAGTTCGGGATAAATAGTAGCTGGCCAGacagctatatagcaagaccctatttcagaaaccaaagaaaggagaaaaaattgATTGTTAAATGTGGTTGTATGATTTTAAACCCACTAGAAGATGTactttgatatgtgtgtgtatcctggGTACCCTCTGAGCTCAGAGAGGGTATCAggtctctgaaactggagttacagagttaTGAGCTAGGTACCAAAcctgagtcctgtgcaagagcatcaagtgctcttcacttttgagccatccctccaaccaTAAATTAACTTTACATTCATACATTTTGTGCTGTGTTGATTTTATAAAgtcatatttgtattttatgtatgtgagtacactatcactgtTGCTgtccaaacacaccagaagaggacatccggATCcctttagatggttgtgagccaccatgtggctgctgggaattgaactcaggacctctggaagagcagccagtgctcttaaccactgagccatctctccagtccaaagtcatatttttaaaaaaggggcgGGGGGTCGGGGGGAGGCTCACAGTGGGAGCTTCACCTGCAGAGGAAGTTCATCTCAGGAACTTGGATAAATGTTACTTCTCCCAGTACTGAGTTGAGGTGTCCGTGTATCTTGGACTGGTGACAGCAACAACCACCATTTGGCCAGGAGCATGAGTGGTCTCTGTTGGGGAATTTCTATTCTGTGGAGATGGATGTAGCCAATAAAAAGGAGTTACAACCC