Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Gpbp1l1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name GC-rich promoter binding protein 1-like 1
Also known as 5330440M15Rik
Coordinate chr4:116414357-116451099
Strand +
Gene summary Predicted to enable DNA binding activity and RNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human GPBP1L1 (GC-rich promoter binding protein 1 like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gpbp1l1

Retroname Coord Strand Genomic Region ENSG
Gpbp1l1P2 chr12:66316555-66317288 + Intergenic
 ENSMUSG00000113531 UCSC
Gpbp1l1P1 chr1:163557822-163558276 + Intergenic
 ENSMUSG00000089700 UCSC
Gpbp1l1P3 chr13:113897256-113898668 - Intergenic
 ENSMUSG00000114962 UCSC
Gpbp1l1P4 chr15:41893786-41897244 - Intergenic
 ENSMUSG00000116215 UCSC

Expression

Transcript Sequences

>NM_001368177.1
AACTTCAGTTCCCGGTCGGAAACGCTCACCTGCGGCTCCGGCTCCTCTCCAGGAGTTCCGGCTTGATAGTGagatTGGCAGACTCAAGTGGCCTTTTTAATGTTTGAGTAATGATGGAGATGGACCCAAATTAGAAAGTGATTTCTTCAATAAAGCAATAGAAGATTCTTCCTATCTTCTGGAAGCTCAGTCCAGTTTTGGGGAAGGAGGAGAACAAGTGAAATACAGAAAATTGATAAGAAGCAAACCTCATTTTggaattctcttttcttcctgaccCTTATCTTTTCTACTTATAATTTTGCTTTGAATGTATAAATAGTAAAGACCAAAGAAATAGGGATATATATTTAGGAGCTTTATACCAAGAAATTTGCCTTGAAAGCTGCTATTCTGTGGCAGGAAAACTATATCAAGTTTCTATTGGATtcctttttcaaaaaacaaaacaagacttctTATATCTTTAGATTTTGAAGGTTAAAACTATAAAAGCACATCTCTCTGCACAATGCTTTAAGCAGTTGTGTGAGATAGTGAGATTTATGTTAAAAGCTTCTGTTGTGGATAGTTTGCCACTGGAATTGATTGTGCAGAAGCTCTCTTACAGTGCTTTACTATTACATTTGACCTGTCACCTTGATGACATTTCTTGCCCACATCTGAGACCATTTGTCCTTGTAGCCATGACCTTGTTATGAACAGTGCTTGCACTCACTGTGCAGATGTCCATGTTTTGCCTATTTGAGCAACATTACAGTGCCATTACTCAAGGCAGTTGAATGAGGTGAACATAGACATAgcttcccccctttccccccttttttaaatGTAACAAATAACCTTTTATGTTCCCcttcccccccttcccctccccctcccccctttggaAAAGTGTTGGGAAGGAGGTATTGAGGATGAGCCGTTGAGAGGATTAAGAGGGTGGGCCACACAGAGCTGGGCTTTTTTGTGCTTCATCACAAGGCGTGCTGCTGGCCAGGCTATTTTAGCACCCTTCTTACAAGAACACCTCGTGGAAGATACAGGCGGCAACTTTGGATACAGGACCACAGAGGTGACACTCTGAGGATCCTGGCCATGAGGTTGGATGCCTCATCTTGCTAAAAAGACACTGGACCTAAATGGCGCAGCATGACTTTGTTCCTGCTTGGCTAAATTTCTCAACGCCACAGTCATCTAAGTCATCTACAGCCACCTTTGACAAACACGGAGAGCACCTATCCCGTGGAGAAGGTAGATTTGGAATAAGCCGTCGTCGACATAATTCCTCTGATGGCTTTTTTAACAATGGACCTCTACGGACTACGGGAGATTCTTGGCACCAACCCTCCCTATTCCGCCATGATTCTGTTGACTCTGGTGTCTCTAAGGGAGCATATGCTGGAACCACAGGTTGGCATGGCTCTTCCCGAGGTCATGATGGTATGAGCCAACGTAGTGGAGGTAGTAGTACAGGAAACCACCGACACTGGAATGGCAGCTTCCATTCCCGGAAAGGCTGCGCCTTTCAAGAAAAAACACCAACTGAGattagggaagaaaagaaagaggataaAGTAGAAAAGTTGCAGTTTGAAGAGGAAGACTTCCCTTCTTTGAATCCAGAAGCTGGCAAACAGAATCAGCCCTGCAGACCTGTTGGGACCCCTTCTGGAGTGTGGGAAAATCCACCTAGTGCCAAGCAACCCTCAAAGATGCTAGTCATCAAAAAAATTTCCAAAGAGGATCCTGCTGCTGCCTTTTCTGCTGCATTCACCTCCTCAGGATCCCACCATGCAAATGGGAACAAAGTGTCAACAATGGTCCCAAGTGTCTATAAGAACTTGGTGCCTAAGCCTGCACCACCTCCCTCTAAGCCCAACGCCTGGAAAGCTAACAGAACGGAACACAAACCTGGATCACTTTGCTCTAGCCGGGAGTCTGCTTTCACCAATCCAATTTCTGTTACTAAACCAGTGGGACTGGCTGCTGGTGCAGGTCTCCACTCTCCCAAAGAGAGTCCCTCCAGTACTACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAATTGACCCGACGAACCACAGACAGGAAGAGTGAGTTCCTGAAGACTCTGAAGGATGAACGAAATGGAGACTGCTCAGAAAGTAGAGACTGTGACAAGCTGGAGGGGCTAAGATTGGAGGGCAGCCACACACCCGAACCAAAGGAAAATGGAGAACAAGGTTGTCTTCAGAACGGTCTTTCTCTACCCATGGTAGAGGAAGGGGAGGTTCTGTCACACTCTCTGGAAGCAGAGCACAGGTTATTAAAAGCAATGGGGTGGCAGGAGTACCCTGAAAATGATGAGAGCTGCCTTCCACTCACAGAGGACGAGCTCAAGGAGTTCCACCTGAGAACAGAGCAGCTACGAAGAAATGGGTTTGGAAAGAATGGCCTCTTACAAAGCCGTAGTTGCAGCCTGTCCTCCCCGTGGAGAAGCACTTGCATTGCAGAGTGTGAGGACTCAGACTCGGAAACGAGCAGCAGCCAGACGTCAGACGACGATGCCTGGAAGTAGAGATAAAATGCTCACAGTGACCTGCCCCGCTGAGCTCAGCCTTGTGTTTAGAGAATATAaagtgttcttttccttttcttatgtTGTTGAATACTTCATGCACAAGGGAAATAATCATATCCCAAAGAGAGAGCAATTGTCTTGCTTAGCCTTTGTTTTCTTCCCTGTTACCTGCTTAATAGGCATTTGTGTGGTGGGATTtttttaagcacacacacagtacctGTGGGGCTGTGCACAAGTGGGAGCTGTCAGGGCAGAGATGCAGGGAGGAGATGCTGCTCTGCTCAACAGCTTCTACTACCAGCCCTTGGGGACTCACCCCTGTGCTCAAGCAATCATTGTCAATGACAAAGTGACTATTGAAGTTATAATTGTATTAAATTAATGCTaataatttggatattttattttatttttggctgcTGGGTAACTTAGCCCTTAACCAAGCAtatgtggttgtttttgttttttttttttttttgttttgttttgttttttattttctctttttttttttttttcttttgggtacAGCTGTAAAATATTTGGATATAGGAAATGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGTAAAATATGAATTTTTGTGAGATTTCAAAGATTAAGATTATTTTGATAACATTATTTACAGATTTAAAAGATGTGGTTACCACAAGTCTGTTGAGGGGAAAAACTACTGCATAAAATAACTAACGTCGAATAAATATTTTGCATCAGTTTGGATTGTCTTGtgtaagaaatatattttctttaaaattagagagtggattctttttttaagggaaatatttttagaaaactaGGGGAAAACTGAATTCAGCCCCACCTGTTTCTCTTTTCAGCAAAAATTCTTAATGTGGAAAAAACCTGTGCAATAAATTATTCATaataaactacattttttttactGAAGGAA
>NM_029868.3
GTCGCTCCTCCTCCACCCGCTCTGCCCCCTCCTGGGCCTTGTGGGCCGGGCAGCCATTTTGGGAAGAGCTTTGTTATGGTTGTGGGCTAGTCACCTCTGCTGGTCGGAGAAGCTGAGGACGCGTCCTCAGACGCCGCGAGTCGTCCTTGACCGTAGCCCCGCCGCTGCCGGagatTGGCAGACTCAAGTGGCCTTTTTAATGTTTGAGTAATGATGGAGATGGACCCAAATTAGAAAGTGATTTCTTCAATAAAGCAATAGAAGATTCTTCCTATCTTCTGGAAGCTCAGTCCAGTTTTGGGGAAGGAGGAGAACAAGTGAAATACAGAAAATTGATAAGAAGCAAACCTCATTTTggaattctcttttcttcctgaccCTTATCTTTTCTACTTATAATTTTGCTTTGAATGTATAAATAGTAAAGACCAAAGAAATAGGGATATATATTTAGGAGCTTTATACCAAGAAATTTGCCTTGAAAGCTGCTATTCTGTGGCAGGAAAACTATATCAAGTTTCTATTGGATtcctttttcaaaaaacaaaacaagacttctTATATCTTTAGATTTTGAAGGTTAAAACTATAAAAGCACATCTCTCTGCACAATGCTTTAAGCAGTTGTGTGAGATAGTGAGATTTATGTTAAAAGCTTCTGTTGTGGATAGTTTGCCACTGGAATTGATTGTGCAGAAGCTCTCTTACAGTGCTTTACTATTACATTTGACCTGTCACCTTGATGACATTTCTTGCCCACATCTGAGACCATTTGTCCTTGTAGCCATGACCTTGTTATGAACAGTGCTTGCACTCACTGTGCAGATGTCCATGTTTTGCCTATTTGAGCAACATTACAGTGCCATTACTCAAGGCAGTTGAATGAGGTGAACATAGACATAgcttcccccctttccccccttttttaaatGTAACAAATAACCTTTTATGTTCCCcttcccccccttcccctccccctcccccctttggaAAAGTGTTGGGAAGGAGGTATTGAGGATGAGCCGTTGAGAGGATTAAGAGGGTGGGCCACACAGAGCTGGGCTTTTTTGTGCTTCATCACAAGGCGTGCTGCTGGCCAGGCTATTTTAGCACCCTTCTTACAAGAACACCTCGTGGAAGATACAGGCGGCAACTTTGGATACAGGACCACAGAGGTGACACTCTGAGGATCCTGGCCATGAGGTTGGATGCCTCATCTTGCTAAAAAGACACTGGACCTAAATGGCGCAGCATGACTTTGTTCCTGCTTGGCTAAATTTCTCAACGCCACAGTCATCTAAGTCATCTACAGCCACCTTTGACAAACACGGAGAGCACCTATCCCGTGGAGAAGGTAGATTTGGAATAAGCCGTCGTCGACATAATTCCTCTGATGGCTTTTTTAACAATGGACCTCTACGGACTACGGGAGATTCTTGGCACCAACCCTCCCTATTCCGCCATGATTCTGTTGACTCTGGTGTCTCTAAGGGAGCATATGCTGGAACCACAGGTTGGCATGGCTCTTCCCGAGGTCATGATGGTATGAGCCAACGTAGTGGAGGTAGTAGTACAGGAAACCACCGACACTGGAATGGCAGCTTCCATTCCCGGAAAGGCTGCGCCTTTCAAGAAAAAACACCAACTGAGattagggaagaaaagaaagaggataaAGTAGAAAAGTTGCAGTTTGAAGAGGAAGACTTCCCTTCTTTGAATCCAGAAGCTGGCAAACAGAATCAGCCCTGCAGACCTGTTGGGACCCCTTCTGGAGTGTGGGAAAATCCACCTAGTGCCAAGCAACCCTCAAAGATGCTAGTCATCAAAAAAATTTCCAAAGAGGATCCTGCTGCTGCCTTTTCTGCTGCATTCACCTCCTCAGGATCCCACCATGCAAATGGGAACAAAGTGTCAACAATGGTCCCAAGTGTCTATAAGAACTTGGTGCCTAAGCCTGCACCACCTCCCTCTAAGCCCAACGCCTGGAAAGCTAACAGAACGGAACACAAACCTGGATCACTTTGCTCTAGCCGGGAGTCTGCTTTCACCAATCCAATTTCTGTTACTAAACCAGTGGGACTGGCTGCTGGTGCAGGTCTCCACTCTCCCAAAGAGAGTCCCTCCAGTACTACCCCTCCAATTGAGATCAGCTCCTCTCGTCTGACCAAATTGACCCGACGAACCACAGACAGGAAGAGTGAGTTCCTGAAGACTCTGAAGGATGAACGAAATGGAGACTGCTCAGAAAGTAGAGACTGTGACAAGCTGGAGGGGCTAAGATTGGAGGGCAGCCACACACCCGAACCAAAGGAAAATGGAGAACAAGGTTGTCTTCAGAACGGTCTTTCTCTACCCATGGTAGAGGAAGGGGAGGTTCTGTCACACTCTCTGGAAGCAGAGCACAGGTTATTAAAAGCAATGGGGTGGCAGGAGTACCCTGAAAATGATGAGAGCTGCCTTCCACTCACAGAGGACGAGCTCAAGGAGTTCCACCTGAGAACAGAGCAGCTACGAAGAAATGGGTTTGGAAAGAATGGCCTCTTACAAAGCCGTAGTTGCAGCCTGTCCTCCCCGTGGAGAAGCACTTGCATTGCAGAGTGTGAGGACTCAGACTCGGAAACGAGCAGCAGCCAGACGTCAGACGACGATGCCTGGAAGTAGAGATAAAATGCTCACAGTGACCTGCCCCGCTGAGCTCAGCCTTGTGTTTAGAGAATATAaagtgttcttttccttttcttatgtTGTTGAATACTTCATGCACAAGGGAAATAATCATATCCCAAAGAGAGAGCAATTGTCTTGCTTAGCCTTTGTTTTCTTCCCTGTTACCTGCTTAATAGGCATTTGTGTGGTGGGATTtttttaagcacacacacagtacctGTGGGGCTGTGCACAAGTGGGAGCTGTCAGGGCAGAGATGCAGGGAGGAGATGCTGCTCTGCTCAACAGCTTCTACTACCAGCCCTTGGGGACTCACCCCTGTGCTCAAGCAATCATTGTCAATGACAAAGTGACTATTGAAGTTATAATTGTATTAAATTAATGCTaataatttggatattttattttatttttggctgcTGGGTAACTTAGCCCTTAACCAAGCAtatgtggttgtttttgttttttttttttttttgttttgttttgttttttattttctctttttttttttttttcttttgggtacAGCTGTAAAATATTTGGATATAGGAAATGTTATTCTTGCAGCCTTGATATTCAGGGTGGATTGTAAAATATGAATTTTTGTGAGATTTCAAAGATTAAGATTATTTTGATAACATTATTTACAGATTTAAAAGATGTGGTTACCACAAGTCTGTTGAGGGGAAAAACTACTGCATAAAATAACTAACGTCGAATAAATATTTTGCATCAGTTTGGATTGTCTTGtgtaagaaatatattttctttaaaattagagagtggattctttttttaagggaaatatttttagaaaactaGGGGAAAACTGAATTCAGCCCCACCTGTTTCTCTTTTCAGCAAAAATTCTTAATGTGGAAAAAACCTGTGCAATAAATTATTCATaataaactacattttttttactGAAGGAA