Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Trappc6b
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name trafficking protein particle complex 6B
Also known as 5830498C14Rik
Coordinate chr12:59089878-59108258
Strand -
Gene summary Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to act upstream of or within nervous system development. Predicted to be located in Golgi apparatus and endoplasmic reticulum. Predicted to be part of TRAPP complex. Predicted to be active in cis-Golgi network and trans-Golgi network. Is expressed in ganglia; trigeminal nerve; and ventral grey horn. Orthologous to human TRAPPC6B (trafficking protein particle complex subunit 6B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Trappc6b

Retroname Coord Strand Genomic Region ENSG
Trappc6bP2 chr2:152299734-152299998 + Intergenic
 ENSMUSG00000083230 UCSC
Trappc6bP3 chr18:66550393-66550871 + Intergenic
 ENSMUSG00000117665 UCSC
Trappc6bP1 chr2:103648839-103649897 - Intergenic
 ENSMUSG00000081010 UCSC

Expression

Transcript Sequences

>NM_001306217.1
GGAAGTGGCTCAGGCTCCACGCCCAGCGCTATAGTCTTGGCAGAGTGTGGGGCTGTCACAGGGTCTCTAGGGCCCAGTGGCGGCGGCCCCGGGGAGGGGCGCGGTCCACGGCGGCCTTCCGCGGCCTTAGGACCCGGGTAGGCCGCTGAGCACGGCGTGCGGTGGGCGCGGGGTAACGGGAACCTCGAGTCCCGCACTGATCGGAGCCGACTCGGCGCTGGAGGGATCGGCGGGAAATGGCGGACGAGGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTCCGGAGTGTACAAGTCCGCCGAGCAGGGGGAAGTGGAAAATGGAAGGTGTGTTACTAAGCTGGAGAGCATGGGGTTCCGAGTGGGGCAAGGACTGATAGAAAGGTTTACGAAAGATACTGCAAGGTTCAAGGATGAATTAGACATCATGAAGTTCATCTGTAAAGATTTTTGGACTACAGTATTCAAGAAACAGATTGACAATCTGAGGACAAATCATCAGggcatATATGTACTTCAGGACAACAAATTTCGACTACTCATTCAGCTGTCTGCAGGAAAACAGTATTTAGAACATGCGTCCAAGGCAAATTTCAGGTGATGATACAGAAGCTGTAGAGCGAGCTGGCGACTCCTGGGCAGAGCGTTGCACATCCTGATTTCACCTCATCGTTGGTTATCTGCGTTGGAGCAAATCGTTATCTCACCAGAGTCACATAGACCAAATCAAAGTAGACACAGGTCCTTTGACCATGACAGAAACTGACTGACCTATTCAGTGATTTCAGAGAACTAGACACCAAGATGCAAGGCTCTTCATTTTAAACATCTTTATTTCCATAGGTGATTAGCATTTAACCATCAATAGGAAGTGAAACTCAGGGTGTGTTGAATTgctgtattaaaaaaaatgcaccaATCAGAATAGTTTGTGTTCAAATGACCAAAATTTGTTGAACTATAAATCTGTTTTAGttatttaaaaaagcaaaccacTATGTTAAATTAAgcttaatttttattgtattgcTTATAATTTATTTCTGTCGAGAGAATTCATATGCTTATGTAAGGATATCATTTAtacattgtgtatatatgtgtatatataaatacatgcattACTGTCTAAATtacttgaaagtttattttaatagACTTGAGTCCTTGA
>NM_030057.3
GGAAGTGGCTCAGGCTCCACGCCCAGCGCTATAGTCTTGGCAGAGTGTGGGGCTGTCACAGGGTCTCTAGGGCCCAGTGGCGGCGGCCCCGGGGAGGGGCGCGGTCCACGGCGGCCTTCCGCGGCCTTAGGACCCGGGTAGGCCGCTGAGCACGGCGTGCGGTGGGCGCGGGGTAACGGGAACCTCGAGTCCCGCACTGATCGGAGCCGACTCGGCGCTGGAGGGATCGGCGGGAAATGGCGGACGAGGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTCCGGAGTGTACAAGTCCGCCGAGCAGGGGGAAGTGGAAAATGGAAGGTGTGTTACTAAGCTGGAGAGCATGGGGTTCCGAGTGGGGCAAGGACTGATAGAAAGGTTTACGAAAGATACTGCAAGGTTCAAGGATGAATTAGACATCATGAAGTTCATCTGTAAAGATTTTTGGACTACAGTATTCAAGAAACAGATTGACAATCTGAGGACAAATCATCAGggcatATATGTACTTCAGGACAACAAATTTCGACTACTCATTCAGCTGTCTGCAGGAAAACAGTATTTAGAACATGCGTCCAAGtATCTAGCATTCACATGTGGCTTAATCAGAGGTGGTTTGTCGAACTTGGGAATAAAAAGTATTGTAACAGCTGAAGTCTCTTCAATGCCTGCCTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAGCGAGCTGGCGACTCCTGGGCAGAGCGTTGCACATCCTGATTTCACCTCATCGTTGGTTATCTGCGTTGGAGCAAATCGTTATCTCACCAGAGTCACATAGACCAAATCAAAGTAGACACAGGTCCTTTGACCATGACAGAAACTGACTGACCTATTCAGTGATTTCAGAGAACTAGACACCAAGATGCAAGGCTCTTCATTTTAAACATCTTTATTTCCATAGGTGATTAGCATTTAACCATCAATAGGAAGTGAAACTCAGGGTGTGTTGAATTgctgtattaaaaaaaatgcaccaATCAGAATAGTTTGTGTTCAAATGACCAAAATTTGTTGAACTATAAATCTGTTTTAGttatttaaaaaagcaaaccacTATGTTAAATTAAgcttaatttttattgtattgcTTATAATTTATTTCTGTCGAGAGAATTCATATGCTTATGTAAGGATATCATTTAtacattgtgtatatatgtgtatatataaatacatgcattACTGTCTAAATtacttgaaagtttattttaatagACTTGAGTCCTTGA