Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Pym1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PYM homolog 1, exon junction complex associated factor
Also known as A030010B05Rik|Pym|Wibg
Coordinate chr10:128579989-128602437
Strand +
Gene summary Predicted to enable RNA binding activity and ribosome binding activity. Predicted to be involved in exon-exon junction complex disassembly; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; and positive regulation of translation. Predicted to act upstream of or within regulation of translation. Predicted to be located in cell junction; cytosol; and nuclear lumen. Predicted to be part of exon-exon junction complex. Predicted to be active in cytoplasm. Orthologous to human PYM1 (PYM homolog 1, exon junction complex associated factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pym1

Retroname Coord Strand Genomic Region ENSG
Pym1P2 chr4:91044930-91045920 + Intergenic
 ENSMUSG00000081876 UCSC
Pym1P3 chr5:32342958-32343498 + Intergenic
 ENSMUSG00000107220 UCSC
Pym1P1 chr3:121043259-121044418 - Intragenic
 ENSMUSG00000106619 UCSC

Expression

Transcript Sequences

>NM_001170869.2
GGATGAGGACTCCACTTCCGGCGGGGAGGGGGGCGGGACCCCAGCCCGCTCACGCCGGAAGTGGTTCGGGTTCTCAAGATGGCGACTCCCTATGTAACTGACGAGACCGGCGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCTATGAAAACAAGTATGTGAAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAAcaggagaaagaagcagaggcCTTGAGCAGGACTCTTGATAAGGTGTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGCCACCACAGAGAAAGCCAAGAAGATCAAGAACCTGAGGAAGAAGCTTCGGCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACGGAGGGTtctggaggaggagctggaggacttGGAGTTGGGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGGTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCACCTCCTGTGGCCCGACTCCGTCCTCCAGAGCCTAGGCTCTCTTTCATCCCTTCCACTTCTTCTCAGCTCCTGTTTTTGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTTGTTGAAAAGGAAACCGGGGGGGTGGGAGTCTGTTAGCGATCTGAGGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGACCATCCcgatttccccccaccccaccccccacgccccttaattttttttttttttttttttaaagaaaagaataaattgaaGTAGATGACATGTG
>NM_001253704.1
GGATGAGGACTCCACTTCCGGCGGGGAGGGGGGCGGGACCCCAGCCCGCTCACGCCGGAAGTGGTTCGGGTTCTCAAGATGGCGACTCCCTATGTAACTGACGAGACCGGCGCTACACCTCAGGATTACTACAACCTGGACTTCATCTGTGACACATTTCCTTTCAGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCTATGAAAACAAGTATGTGAAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAAcaggagaaagaagcagaggcCTTGAGCAGGACTCTTGATAAGGTGTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGCCACCACAGAGAAAGCCAAGAAGATCAAGAACCTGAGGAAGAAGCTTCGGCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACGGAGGGTtctggaggaggagctggaggacttGGAGTTGGGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGGTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCACCTCCTGTGGCCCGACTCCGTCCTCCAGAGCCTAGGCTCTCTTTCATCCCTTCCACTTCTTCTCAGCTCCTGTTTTTGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTTGTTGAAAAGGAAACCGGGGGGGTGGGAGTCTGTTAGCGATCTGAGGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGACCATCCcgatttccccccaccccaccccccacgccccttaattttttttttttttttttttaaagaaaagaataaattgaaGTAGATGACATGTG
>NM_030100.4
gagaggatccagtactgagCAGCAGGCCAAGAAGTTACCTCGCCGGCCGCTGAATCCCCAGGGCTGCCCGCCCCAGTTCAGTCATGGAAACCGCCAGCACCCCCGAGGCCACGGGGACAGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCTATGAAAACAAGTATGTGAAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAAcaggagaaagaagcagaggcCTTGAGCAGGACTCTTGATAAGGTGTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGCCACCACAGAGAAAGCCAAGAAGATCAAGAACCTGAGGAAGAAGCTTCGGCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACGGAGGGTtctggaggaggagctggaggacttGGAGTTGGGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGGTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCACCTCCTGTGGCCCGACTCCGTCCTCCAGAGCCTAGGCTCTCTTTCATCCCTTCCACTTCTTCTCAGCTCCTGTTTTTGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTTGTTGAAAAGGAAACCGGGGGGGTGGGAGTCTGTTAGCGATCTGAGGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGACCATCCcgatttccccccaccccaccccccacgccccttaattttttttttttttttttttaaagaaaagaataaattgaaGTAGATGACATGTG