Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Scyl1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SCY1-like 1 (S. cerevisiae)
Also known as 2810011O19Rik|Ntkl|mdf|mfd|p105
Coordinate chr19:5808450-5821461
Strand -
Gene summary Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within cellular protein localization; inflammatory response; and neuron differentiation. Located in cytoplasm. Part of COPI vesicle coat. Is expressed in hindbrain; jaw; otic capsule; and skeleton. Used to study hereditary ataxia. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 21. Orthologous to human SCYL1 (SCY1 like pseudokinase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scyl1

Retroname Coord Strand Genomic Region ENSG
Scyl1P1 chr11:97119857-97120473 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001361921.1
gactggctccgccctcgccccgccccgccccggctCGGGCGGCCGGAGGACCCGGAGTGGAGGCTCCCGAGCCCGTGGCGGCGGCGACGATGTGGTTCTTTGCCCGGGACCCGGTCCGGGACTTCCCGTTCGAGCTGAGCCCTGAGCCCCCCGAAGGCGGGCCGCCCGGGCCCTGGATCCTGCACCGAGGCCGCAAAAAGGCCACAGGCAGCGCAGTGTCCATCTTCGTGTATGATGTGAAACCGGGAGCTGAAGAGCAGACCCAGGTGGCCAAAGCTGCCTTCAAACGCCTCAAAACTCTCCGACACCCCAACATCCTGGCCTATATCGATGGGTTGGAGACAGAAAAGTGCCTCCACATCGTGACAGAGGCTGTGACCCCCCTGGGAACATACCTCAAGGCACGAGCAGAAGCAGGTGGCCTGAAGGAGCAGGAGCTGTCATGGGGGTTACACCAGATCGTGAAAGCCCTCAGCTTCCTGGTCAACGACTGCAACctcatccacaataatgtctgcatGGCCGCTGTGTTTGTGGACAGGGCTGGCGAGTGGAAACTTGGGGGTCTGGACTACATGTACTCGGCACAGGGCAACGGCGGGGGACCACCCAGCAAGGGGATCCCGGAGCTCGAGCAGTATGATCCCCCGGAGCTGGCTGACAGCAGTAGCAGAGCAGTCAGAGAGAAGTGGTCAGCAGACATGTGGCGCTTGGGCTGCCTCATCTGGGAAGTTTTCAATGGGTCTCTACCTCGGGCAGCTGCCCTGCGCAACCCTGGGAAGATCCCCAAATCCCTGGTGACCCATTACTGTGAACTGGTGGGAGCTAACCCAAAAGTACGTCCCAACCCGGCCCGCTTCCTGCAGAACTGCCGGGCACCCGGTGGCTTCATGAGCAACCGCTTTGTTGAGACCAACCTCTTCCTGGAGGAGATTCAGATCAAAGAGCCAGCTGAGAAGCAGAAGTTCTTCCAAGAGCTGAGCAAGAGTCTAGACTCATTTCCCGAAGATTTCTGTCGACACAAGGTGCTGCCCCAGCTACTGACTGCCTTTGAGTTTGGCAATGCTGGGGCCGTGGTCCTCACACCTCTCTTCAAGGTGGGAAAATCCCTCCGTGCTGAAGAGTACCAGGAGAAGATCATCCCCGTGGTAGTTAAGATGTTCTCATCCACCGACCGGGCCATGCGCATCCGCCTCCTCCAGCAGATGGAGCAGTTCATCCAATACCTTGATGAGCCAACAGTCAACACGCAGATTTTCCCCCACGTCACACATGGCTTCCTGGACACCAACCCCGCCATCCGCGAGCAGACGGTCAAGTCCATGCTGCTCTTGGCCCCAAAGCTGAATGAGGCCAATCTCAATGTGGAACTGATGAAGCACTTTGCAAGGCTACAAGCCAAGGACGACCAGGGTCCTATCCGCTGCAACACCACGGTCTGCTTGGGCAAAATCGGCTCCTATCTCAGTGCTAGTACTAGACACAGGGTCCTCACCTCCGCCTTCAGCAGAGCCACTAAGGACCCATTTGCACCATCCCGGGTTGCGGGTGTCCTGGGCTTTGCTGCCACACACAATCTCTATTCGATGGACGACTGTGCCCATAAGATCCTGCCTGTGCTCTGTGGCCTTACTGTGGACCCTGAGAAATCTGTGCGGGACCAGGCCTTTAAGACCATTCGAAGCTTCCTGTCCAAATTAGAGTCTGTGTCAGAGGATCCCACCCAGCTGGCAGAAGTAGAGAAGGATGTCCATGCAGCGTCCAGTCCTGGAACAGGAGGAGCTGCAGCCAGCTGGGCAGGCTGGGCTGTGACTGGGGTATCCTCTCTCACCTCCAAGCTGATCCGAGCACACCCCACGCCTGTGCCGTCTGATACCACTGTGCCCCAGAGACCAGTGCCAGAGGGGCACTGGGAGACACAGGAAGACAAGGACACTGCAGAAGACAGCGCCACTGCTGACAGATGGGACGATGAGGACTGGGGCAGCTTGGAGCAGGAAGCTGAATCCGTGTTGGCACAGCAGGATGACTGGAGTGCCAAGGGCCAAGGAAGCCGAGCTGGACAGATCAACCACCCAGACCACAAATCTCTGGAATCACATTGGAGCAGCTGGGAAGTTGAGGGCTCCTGGGACCAGGGCTGGCAGGAACCCAGCTCTGTGGAGCCACCTCCAGAAGGCACTCGGCTAGCTAGCGAATATAACTGGGGTGGTGCAGAGCCCAGTGACAAGGGCGACCCCTTTGCTGCCCTGTCTGTTCGTCCCAGCGCTCAGCCCAGGCCAGACCCAGACTCCTGGGGTGAAGACAACTGGGAAGGCTTGGAGGCTGAGAGCAGACAGGTAAAGGCAGAGCTGGCCCGGAAAAAgcgagaggaaaggagaagagaaatggAAGCCAAACGGGCAgagaaaaagaccaccaagggGCCCATGAAGCTGGGAGCCCGGAAGCTGGACTgacaaccccacccccaagccacTGGGCTTCCAACCACTGGAGAGCAGGCCCGGCGGATGTATTTATTGTACAAACCATGTGAGCCTGGTCAGCAGGTCAGGCACATCTAGTGTACATAATCAGAGCCACAATAAATTCTATTTCACA