Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hnrnpd
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name heterogeneous nuclear ribonucleoprotein D
Also known as Auf1|Hnrpd
Coordinate chr14:11256268-11274583
Strand +
Gene summary Enables chromatin binding activity; histone deacetylase binding activity; and nucleic acid binding activity. Involved in several processes, including cellular response to estradiol stimulus; cellular response to organonitrogen compound; and regulation of mRNA stability. Located in cytosol and nucleus. Used to study uremia. Biomarker of hepatocellular carcinoma. Orthologous to human HNRNPD (heterogeneous nuclear ribonucleoprotein D). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hnrnpd

Retroname Coord Strand Genomic Region ENSG
HnrnpdP1 chr5:53096661-53097146 - Intergenic
N/A UCSC
HnrnpdP2 chrX:33579928-33581077 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001082540.1
GCGGCGGCGCCATTAAAGCGAGGAGGAGGCGAGAGTGGCCGCCGCTGCTACTTATTCTTTTTTAGTGCAGCCGGGGAGAGTGAGAGTGCGCGCTGCGCGAGAGTGGGAGGCGAGGGGGGCAGGCCGGGGAGAGGCGCAGGAGCCTTTGCAGCCACGCGCGCGCCTTGTCTTGTGTGCCTCGCGAGGTAGAGCGGGCGCGCGGCGGCGGCGGGGATTACTTTGCTGCTAGTTTCGGTTCgcggcggcggcgggtgtcgtctcggcggcggcggaggcagtagcactatgtcggaggagcagttcggaggggacggggcggcggcggcggcaacggcggcggtaggcggctcggcgggcgagcaggagggagccatggtggcggcggcgcagggggcagcggcggcggcgggaagcgggagcggcggcggcTCTGCGCCCGGAGGCACCGAAGGAGGCAGCACCGAGGCAGAGGGAGCGAAGATCGACGCCAGTAAGAATGAGGAGGATGAAGGCCATTCAAACTCCTCCCCACGACACACTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAGCTGGGACACCACAAAGAAAGACCTGAAGGACTACTTTTCCAAATTTGGGGACGTTGTAGACTGCACTCTGAAGTTAGATCCTATCACAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAAGAACATAAATTGAATGGGAAAGTCATTGATCCTAAAAGGGCCAAAGCCATGAAAACAAAAGAGCCCGTCAAAAAAATTTTTGTTGGTGGCCTTTCTCCAGACACACCTGAAGAAAAAATAAGAGAGTACTTTGGTGGTTTTGGTGAGGTTGAATCCATAGAGCTGCCTATGGACAACAAGACCAATAAGAGGCGTGGGTTCTGTTTCATTACCTTTAAGGAAGAGGAACCAGTGAAGAAGATAATGGAGAAGAAATACCACAATGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCCATGTCGAaggagcagtatcagcagcagcagcagTGGGGATCTAGAGGAGGGTTTGCAGGAAGAGCTCGCGGAAGAGGCGGTGATCAGCAGAGTGGTTATGGGAAAGTATCCAGACGAGGTGGTCATCAAAATAGCTACAAACCATACTAAATTATTCCATTTGCAACTTATCCCCAACAGGTGGTGAAGCAGTATTTTCCAATTTGAAGATTCATTTGAAGGTGGCTCCTGCCACCTGCTAATAGCAGTTCAAACTAAATTTTTTCTATCAAGTTCCCGAATGGAAGTATGACGTTGGGTCCCTCTGAAGTTTAATTCTGAGTTCTCATTAAAAGAATTTGCTTTCATTGTTTTATTTCTTAATTGCTATGCTTCAGTATCAATTTGTGTTTTATGCCCCCCTCCCCCCCAGTATTGTAGAGCAAGTCTTGTGTTACAAGCCCAGTGTGACAGTGTCATGATGTAGTAGTGTCTTACTGGTTTTTTAATAAATCCTTTTGTATAAAAA
>NM_024404.2
GCGGCGGCGCCATTAAAGCGAGGAGGAGGCGAGAGTGGCCGCCGCTGCTACTTATTCTTTTTTAGTGCAGCCGGGGAGAGTGAGAGTGCGCGCTGCGCGAGAGTGGGAGGCGAGGGGGGCAGGCCGGGGAGAGGCGCAGGAGCCTTTGCAGCCACGCGCGCGCCTTGTCTTGTGTGCCTCGCGAGGTAGAGCGGGCGCGCGGCGGCGGCGGGGATTACTTTGCTGCTAGTTTCGGTTCgcggcggcggcgggtgtcgtctcggcggcggcggaggcagtagcactatgtcggaggagcagttcggaggggacggggcggcggcggcggcaacggcggcggtaggcggctcggcgggcgagcaggagggagccatggtggcggcggcgcagggggcagcggcggcggcgggaagcgggagcggcggcggcTCTGCGCCCGGAGGCACCGAAGGAGGCAGCACCGAGGCAGAGGGAGCGAAGATCGACGCCAGTAAGAATGAGGAGGATGAAGGCCATTCAAACTCCTCCCCACGACACACTGAAGCAGCGACGGCACAGCGGGAAGAATGGAAAATGTTTATAGGAGGCCTTAGCTGGGACACCACAAAGAAAGACCTGAAGGACTACTTTTCCAAATTTGGGGACGTTGTAGACTGCACTCTGAAGTTAGATCCTATCACAGGGCGATCAAGGGGTTTTGGCTTTGTGCTATTTAAAGAGTCGGAGAGTGTAGATAAGGTCATGGATCAGAAAGAACATAAATTGAATGGGAAAGTCATTGATCCTAAAAGGGCCAAAGCCATGAAAACAAAAGAGCCCGTCAAAAAAATTTTTGTTGGTGGCCTTTCTCCAGACACACCTGAAGAAAAAATAAGAGAGTACTTTGGTGGTTTTGGTGAGGTTGAATCCATAGAGCTGCCTATGGACAACAAGACCAATAAGAGGCGTGGGTTCTGTTTCATTACCTTTAAGGAAGAGGAACCAGTGAAGAAGATAATGGAGAAGAAATACCACAATGTTGGTCTTAGTAAATGTGAAATAAAAGTAGCCATGTCGAaggagcagtatcagcagcagcagcagTGGGGATCTAGAGGAGGGTTTGCAGGAAGAGCTCGCGGAAGAGGCGGTGGCCCCAGTCAAAACTGGAACCAGGGATATAGTAACTATTGGAACCAAGGCTATGGCAGCTATGGATATAACAGCCAAGGGTACGGTGGTTATGGAGGATATGACTACACTGGTTACAACAGCTACTATGGATATGGTGACTATAGCAATCAGCAGAGTGGTTATGGGAAAGTATCCAGACGAGGTGGTCATCAAAATAGCTACAAACCATACTAAATTATTCCATTTGCAACTTATCCCCAACAGGTGGTGAAGCAGTATTTTCCAATTTGAAGATTCATTTGAAGGTGGCTCCTGCCACCTGCTAATAGCAGTTCAAACTAAATTTTTTCTATCAAGTTCCCGAATGGAAGTATGACGTTGGGTCCCTCTGAAGTTTAATTCTGAGTTCTCATTAAAAGAATTTGCTTTCATTGTTTTATTTCTTAATTGCTATGCTTCAGTATCAATTTGTGTTTTATGCCCCCCTCCCCCCCAGTATTGTAGAGCAAGTCTTGTGTTACAAGCCCAGTGTGACAGTGTCATGATGTAGTAGTGTCTTACTGGTTTTTTAATAAATCCTTTTGTATAAAAA