Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name LRRC2
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name leucine rich repeat containing 2
Also known as -
Coordinate chr3:46515385-46580099
Strand -
Gene summary This gene encodes a member of the leucine-rich repeat-containing family of proteins, which function in diverse biological pathways. This family member may possibly be a nuclear protein. Similarity to the RAS suppressor protein, as well as expression down-regulation observed in tumor cells, suggests that it may function as a tumor suppressor. The gene is located in the chromosome 3 common eliminated region 1 (C3CER1), a 1.4 Mb region that is commonly deleted in diverse tumors. A related pseudogene has been identified on chromosome 2. [provided by RefSeq, Sep 2011]

Retrocopy(s) from LRRC2

Retroname Coord Strand Genomic Region ENSG
LRRC2P1 chr2:174299146-174300976 - Intergenic
ENSG00000227180 UCSC

Expression

Transcript Sequences

>NM_024512.5
AGGCTTCTTCCGGCTCGGCCGTGCTGCTCAGCGGGTGTAAACAGCCTCTGCGGTGTAAACAGCCTCTGCGGTGTAAACAGCCGCGGCGGGCAGGCCAGGACTGTCAGTGCCCGCCCCTCGGGGCAGGTAATTTCATGCTCCCAAAATGGGACATAAAGTGGTTGTCTTCGACATTTCTGTCATCAGAGCCTTGTGGGAAACTCGTGTCAAGAAGCACAAAGCTTGGCAGAAGAAGGAGGTGGAAAGGCTTGAGAAGAGCGCCTTGGAGAAGATAAAGGAGGAGTGGAACTTTGTGGCCGAATGCAGGAGGAAGGGCATCCCCCAGGCTGTATACTGCAAGAATGGCTTCATAGACACCAGCGTGCGGCTTCTGGACAAGATTGAAAGGAACACTCTCACAAGGCAGAGTTCACTTCCCAAGGACAGAGGCAAACGGAGCAGTGCGTTTGTGTTTGAACTTTCTGGGGAGCACTGGACGGAGCTCCCAGATTCATTGAAGGAGCAGACACACCTGAGAGAATGGTACATAAGCAATACCTTGATTCAAATCATTCCTACATATATTCAGTTATTTCAAGCGATGAGAATTCTGGATCTGCCAAAAAACCAAATCTCACATCTTCCAGCAGAAATCGGTTGTTTGAAGAACCTGAAAGAACTCAATGTGGGTTTCAACTATCTGAAGAGCATTCCTCCAGAATTGGGAGATTGTGAAAATCTAGAGAGACTGGATTGTTCTGGAAATCTAGAATTAATGGAGCTGCCCTTTGAATTAAGTAATTTGAAGCAAGTTACATTTGTAGATATCTCAGCAAACAAGTTTTCCAGTGTCCCAATCTGTGTCCTGCGGATGTCGAATTTGCAGTGGTTGGATATCAGCAGCAATAACCTGACCGACCTGCCGCAAGATATAGACAGGCTAGAGGAGCTGCAGAGCTTTCTCTTGTATAAAAACAAGTTGACCTACCTTCCCTATTCCATGCTGAACCTGAAGAAGCTCACTCTGTTAGTCGTCAGTGGGGACCATTTGGTGGAGCTCCCAACTGCCCTTTGTGACTCATCCACACCTTTAAAATTTGTAAGCCTTATGGACAATCCTATTGATAATGCCCAATGTGAAGATGGCAATGAAATAATGGAAAGTGAACGGGATCGCCAACATTTTGATAAAGAAGTTATGAAAGCCTATATTGAAGACCTTAAAGAAAGAGAATCTGTTCCCAGCTATACCACCAAAGTGTCTTTTAGCCTTCAACTTTGATATCCATCAGAAGACTGCAAATCTCACTATTCTCTGGAGCTATATATAAATCTTTGTTATGATCATGTCATATAGGAAGAATGGCTTGTGCTTAAGGACAAAGTCTAGAAACCACTATCATAGTTGCTAAAAAAAATGGTTTTCAAATGTCAAATACATGAGTATCTCCCTCCATGGACTGGAGAATTGAAAAATTGGTTTGTATATTGATATTTCCAGGTTCATTTGCATATACTTTTTTCCAAATAATGCACATTTAATATGTTTTAAAATGTCTTATTTTTAAGAATTATAACTAAAAGACCAAATACTGAAGTTAAGTGCATTGTTTTCAGGAATCAAAAGATAAAGGggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaagtgggtggatcacctgaggtccggagttcgaggctggtttggccagcatggcgaaaccccatctctactaaaaatacaaaaaattagctgggcatggtggcagttgcctgtaatcctagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggagttgcagtgagccgagatcatgcgactgcactccagcctgggtgacagagccagactctgtctcaaaaaaaaaaaaaaagaaaagaaaaaGATAAAGGGATTGTGAAAAGAGCATTTATATTGGACTAATCAGATGAGAGTGTTTTGTTATTTTGAAAGAGTTTCTTTTACTGAGAATAATCTTCCTTGAGTTTATATAAACTGCTATTTCCATATGTTTTAAGTTATATTTTGGCAAGTGTAGACTCCCAGGAGAGACTTGTAGGTACAATCTAGGCCTTGAAGAAACAAAGGCTGGAATATCTGCCCATGCTTTGGGCATGAGATGCTCAGATGGTGCGTGGGTAGATCTAGTTGAGGAAGTGTGGGCCTGGCTGTTCATGGGAAGTCTTCAGTGGCCTTCATGGATGGCCATCCAGTCCTGAGTGGTCACCCTGGGGGTCCTGGGACACACCTCAGTAAAGAGCAAAGGCAACGCCCTCAGGGTCCCTTCCTCCAAGATGGCCATGTAGGGTAATGGAGATGACCAGTCCACACTGATAAGGAGTTCCTAGCAAGGCTTCCTTGTGGGTACCACAGGACAACTCTGCCCATAGCAAAGATGCTTCAGTCCAGAGGGAGCCCATGGGCTGTTTGAATTTGGGAGAGGTGGGATTCATTACAAGACTTTGGGCTCTTATGTCACATCACATGATTTGGAGAAATTAGACACAATCTCTTATTTTTATACCACTGTCTTGGGCTAAAATAAACAGGTTGTGGCTGATGGTGTTGAAGATAAATAAGCTTAAACAAATAACTTTggccgggcacggtggctcacacctataatcccagcactatgggaggctgaggcaagcaggttgtttgagcccaggaatttgagaacaggattttgagaacagcttggacatcatgacgaaaccccatctccacaaaaaaattcaaaaaattagccaggtgtggtggcatgtgcctgtggtcccagctactcaggaggctgaggtgggaaaatcacttgagcccaggaggtcgaggctgcagtgtgctgtgattgtgacactgccctccagcctgggtgacagagtgagaccctgtctcaaaagcaaaacaaaCAGCAATAACAATATTATTATTGTTATAACTaaaaaaaaaaaaacaaaaacaaGCAGCTTTTGTGACTAAGAAGGAAAATATGCATATAGTGGCATATTTTTATATGAATCATCTCCTCTGTGGTCTTGCCcagtaccatccagtggagctttctgcagtgacggaaatgttctgtatttgcgttgtccaacgtggtaaaccagacacatgtgattcttgagcacttgaacaatgactgatgtgattgaagaacccatctttcaattcaattaaatttaaatagccacatttaactCCAGCCTTGGGTTTGACCTGATggaaaattcccatgagagagtgctccaaaccgttccaaggtggggccagttgcgattctaaaggaagaagcactaaatggcagggtgatcagtccaaagcatttatgaggggagcttacatacagcatgggctgcagcgtccttgtgatgggcagtgagacaagggatgttctacctgggcatgtccccagcgagggggttgggggatggagttcacatgaagatgtaaggaatttgggtgggggctgggctggcttctacatgtttagcaacacggctgatctttcagtgtttccagcaacaacctaagcaccgttatcagtgcctaggaatgttcaaggcccaggctggggttcagacctgcagaggaaaacatcagctggctgggtcaaggcaccatgtgttacttggtcaggacagagacaaaaatgaggaaaactaggggaccccacaCACATGTGGCTACCATACTCCTGAACAGGTCTAGCTAGTTATTTGTTTTTTTGGAAGTTAATCTGGGGTAGAAATGTATGGTGATTTTTATTTTCTCTGTCTGAAGAACCAGCCATTTTTAAAAAGGTTATTATTGACATCCCAATATTTTGTCTTGGTGGGCTTACTCATAAGTCCAAACATTTTATTCTCAACAGGTGTAAAACAGGCAGAGCATTCTAAAACCACATGGTAGTGCTTTGGTGGAGGACTGCTTCCACTTAGAAACAAACTCTGAGAAGTAGGCTaagagaagacaagagggccgggcgcggtgactcacgcctataatcccagcactttgggaggccgagatgggtgaatcatgaggtcaggagttcgagaccagcctaaacaacatagtgaaaccctgtctctattaaaaatgcaaaaaattagccgggcgtggtgggcacccgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaagcagaggttgcagtaagctgagatcccaccattgcactccagcctgggcaacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaagagagagagatgaaaagagtaggaaaatgagaaATCACCTTCGTTGAATCTTAAATAGTTACATTTTTTTCTTTTTAACACTAAAAATACAATTCAAATTTATTAGCTCTACTACTTGAATGATTTTGGAATTTTATGTCATGCTAAGGTATGTGTTACATATGGCCAAGTGGAAAATATATCTGAAGAGGGGCTTTCATACAAATAGACTGTTCATAATTTATGTAAATTTTATTTTAATAAAATCAGTTTTTTGTTTAAAAACCTTGTTTCACTGTCACATATGAAAAAAATACTGCATTGATATATAATTATTTCATGTTACATAATAACCCAAAACAAATAATTACTTGAATATGTTTGTAGAGATACTATTTAATTTATTCATATAAATGTGCAGAAAGATTCCAAAGGAGAATATATATCTTGTGAAAATATGGAGATTTGAAAATTTGACATGATGCAAATAGACTGATACATAATTTGGAAAGGTTATTTACATGGCAGAATACATGTATGAATATTAAAGTAATATGAATGAAAGAATAAAATATTCTTAGAAGAAAAA