Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name NKAP
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name NFKB activating protein
Also known as MRXSHD
Coordinate chrX:119920672-119943751
Strand -
Gene summary This gene encodes a protein that is involved in the activation of the ubiquitous transcription factor NF-kappaB. This protein is associated with the the histone deacetylase HDAC3 and with the Notch corepressor complex, and it thereby acts as a transcriptional repressor of Notch target genes. It is also required for alphabeta T cell development. A related pseudogene has been identified on chromosome X, while a related and intronless retrocopy, which has an intact CDS and may be functional, is located on chromosome 6. [provided by RefSeq, May 2010]

Retrocopy(s) from NKAP

Retroname Coord Strand Genomic Region ENSG
NKAPP1 chr6:28260228-28260576 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_024528.4
GCAGAAGTACCCAGAACTGTGTCCAAGGTTTCCTCAGATTTGGGCTGTTCCGCAGCGGCAGGTCCCGGGAACCAAGGCAACAGACATCTTCCTAGGCTCGCGAGAGCGCCCCCTTGTCCCACGGCTGCTGGGGCCCCCCAGTAGCCATGGCTCCGGTGTCCGGCTCACGCAGCCCGGATAGGGAGGCCTCGGGCTCGGGGGGAAGACGTCGCAGTTCGTCGAAGAGTCCGAAGCCCAGCAAATCTGCCCGCTCCCCGCGGGGCCGCCGCTCTCGCTCGCACTCTTGCTCTCGGTCCGGGGACCGGAATGGACTCACCCATCAGCTGGGTGGCCTCAGCCAAGGCTCCCGAAACCAGTCCTACCGCTCACGCTCGCGGTCGCGTTCTAGAGAGCGGCCCTCTGCGCCCCGGGGCATCCCCTTCGCTTCTGCCTCCTCGTCAGTCTATTACGGCAGCTACTCGCGCCCCTACGGGAGCGACAAGCCTTGGCCTAGCCTCCTCGACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGAGAGAGAGAATTGGAGAATTGGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCTGAACCAGATTCTGATGAACATACACCAGTGGAGGATGAAGAGCCAAAGAAAAGCACTACTTCAGCTTCTACTTCAGAAGAAGAAAAAAAGAAGAAGTCTAGCCGTTCAAAAGAAAGGTCCAAGAAAAGGAGAAAGAAAAAATCATCGAAAAGAAAACATAAGAAGTATTCTGAAGATAGCGACAGTGACTCTGATTCTGAAACAGACTCCAGTGATGAAGATAACAAAAGGAGAGCAAAGAAAGCCAAGAAAAAGGAAAAGAAGAAGAAACACAGATCGAAGAAATATAAGAAAAAGAGGTCTAAGAAGAGCAGAAAAGAGTCCAGTGATTCAAGCTCTAAAGAATCCCAAGAAGAGTTTCTGGAAAATCCCTGGAAGGATCGAACAAAGGCTGAAGAACCATCAGATTTAATTGGCCCAGAGGCTCCAAAAACACTTACCTCTCAAGATGATAAACCTTTGAACTATGGCCATGCTCTGTTACCTGGTGAAGGTGCAGCTATGGCTGAATATGTAAAAGCTGGAAAACGTATCCCACGAAGAGGTGAAATTGGCTTGACAAGTGAAGAAATTGCATCATTTGAATGCTCAGGTTATGTAATGAGTGGTAGCAGGCATCGCCGAATGGAGGCTGTGCGACTGCGAAAAGAGAACCAGATCTACAGTGCTGATGAGAAGAGAGCCCTTGCATCCTTTAACCAAGAAGAGAGACGAAAGAGAGAGAACAAGATTCTGGCCAGTTTTCGAGAAATGGTTTACAGAAAGACCAAAGGGAAGGATGACAAATAAAGATTTTCTGATTGTCCAGAAGACATTTTTAACAACAAAAAAGAAAGTCTGGGTTCCACACATACATAGAAAAAGATTATTATGTTCTGAGAAAGCTTTACAGTGCTACTGTGCCTTCTATTTAATTCTTTCAGTCCTTCAATAAAAAGCTGCTTATTGATATAACTTTAGCAAGTTCTTTGGGTTATTTTGGATTGACCATAGTAACTTTCTGGTTTAAAAATCCAAATTATGggctgggcacggttgctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacttgaggccaggagttcgagaccagcctggccaacatggtgaaaccctgtccctactgaaaatacaaaatcagccaggagtggtggcgcacacctgtagtcccagctactcgagaggaagaggcaggagaattgcttgaacctaggaggtggaggttgcagtgagccgagattgtgccactgcactccagcctgggcgacaaagcaagactgtgtctcagaaaaaaataaaaggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagtcgagaccagcctggccaacatggtgaaaccctgtctctaccaaaaaatacaaaaattagccgggcgtggtggtgggcgcctgtaatcccaactactcgggaggctgaggcaggagaattgcttgaatccaggaggcggaggttgcagtgagccgagattgtgacattgcactccagcctgggcaagaagagtgaaactctgtctcaaaaaaaaaaaaTCCAAATTATGAATAAAATGCTACTGTATTGGAGGAGGTGGCTTGAACAAAAAGTGTTAGTGAGATGAGAAACTTCAATCTCACACCATGAGACAGTGCTACTATTAGCTCTATGTGATGCCTGCCCCACCCCGACCTCTACCCCAGCTGAACTTTTGGGAAATTATCACTCCTCTGTGTTGAATGTGTTATAAATGGACTTGATAGGAACATATAGGAGGCCACTTTTGTTAACAAAATGAAGGCATTGCTGCGAAAAGCAAATCTGGAATTTGAAAACTGACTTGTGTACTATAATATATGATCTACCCTGGAAATAATGGGTTTTGATTTAAGTCCCTACCTCCACTCTAaaaccaacaaacaaaccaaaaagcaaactaacCCACAGATTTGTTGAATTGAAAATGTGAACATTAGATATTTTAAAttgttttttttgagatggaatctcgctcttgttgcccaggctggagtacaatggggtgatctcggctcaccacaacctccacctcctaagttcaagcagttctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgcctggctaattttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcccaaccccaggtgatccgcccgccttggcctcccaaagtgctgggattacaggcatgagccactgcgtccagccTAAATTCTTAATAAGTTACTTAAAAATAGTTATTTGAAATATAAAGTCTTAAGAAGTCTACTCTTATCCCCATGTAAATACTTTATTTCAATCTGAGCTGATATGAGCTTGAGGATAGGATAACATCCAAAAGAATAGGAGTCAACTATGGTCAAGAGTTTTGATAAGGAAAAATATAATGAGTCAGTATTTTAGCTTAATTGTTTCATAAGAGAAACTAAAATGATATTAAATATTTTTAACTGTCTTTCATATACTAAGTAGATTTCATTTTAAACACTTAAACCTTTCTGTTTGTTTTTAAGTTGGGGAGAAATGGAAAATTGTGGGACTATGATATCGTGGTCTTGTTCCTTTGTTTATTTCGTTCAATTTTAATTAGGTCAGAAGAGTGAATGGGGGAGGGAACCCAGGAAGTTTTGGCTGTTTTCATTAAGGTTGGttttctgttttttgttttttgagatagagtctcactctgtcactcaggctggagcccagtggtgtgatctcggctcactgtaacctctgcctcctgggttcaagtgatcctcccacctcagcctcccaagtagctgggattacaggcactcaccaccacaactggctaatttttgtattttcaatagagatggggtttcgccatcttggccaggctggtctcgaactcctgacctcaagtgatctgcccgcctcagcctcctgaaatgctgggattacaggtgtgagcaaccgtgcctggccGTTTTTGTTAAGGTTATTTGATCTGCATTATTATTACATGCCTATGATAAATTTAAATTACCTGAGTGATAAGGACATTCTGATTATACTATTGTAAAATGCCCGCTTGCCTTATATTTTTAAGTGGTTGTTTTTCAAAAGTGTTTAAATAAGGCAGTCATATTTCAAAGTATAGAGCAAAAGtttttttattattatttttgagacagggtctccctctgtcacccaggctagagttcagtggtgcaatctcggctcactgcaacctccacctcctgggctcaagcaatcctccacctcagcctcccgagcagctgggactaccagtgtgcaccaccatgcccagctaatttttgtatagttagtagagacaaggtttcaccttattgcccaggctggtctcaaactccagacctcaaacaatccgcccgcctcggcctcccaaagtgctaggattataggcgtgagccaccacacccggccCAAAGTTTTATAATTAAACAGTATTAACAGTCTTAAATACTATTAAATATATGTTCCAGGAAATGTCTACTTTTAACCCGCAACTACTGAAAATAAGAGTCAGCATGTAGCAGCATTAATGACCCCTGAATTTGAAATGATTTCTGTTTATTTATACCTAATTGTAGTTGCTGCCTAGCCTAATAAATCTGTAGTTTTCAAAAGTTAAAAGAAACTAGTTCCCAAAGTTTTGAGTCTCAATCCATCTACTTCCCTGAATAATAAAACCTGAATTTTGTAATACCCACTTAAAAATTTTATTCTCAgctgggcgtggtggctcacacctataatcccagcactttgggaggccgaggtgggcggaccatgaggtcaggagatcaagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaatgtagccgggcatggtggcacgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcaagccactgcactccggcctgggagacagaatgagactccgtctctaaataaacaaacaaataaaaaTGTATTCTCTAAGGACATTTTTTTTTTGGTTACTGGTTCCTAGAGATGAAATGATTATCTTATTTTCAGTAGGCAAGGTAGTTTAAATGCAGAAATTCTGCGATATATGAATATTGTGACATCAAGAACAGCTTCATTGGCATATTCTTTGGGAAAGAGGCAAGAAGAATAAAAGGGCTAAAAGTATTTTATTTTCAGCTTATGAGTGTTGTTACTGCTTCAAATTGTGTTTAGTCACCTGAGCCATAAATCAGTTGTAGTAGGGCTATTGTATTTTAAATATATTTTTTGTTCTCCAAGGAGACTTATCTAGTTTGCCACCTCCTTGCCTATTGCTCTGATGTGGTTTTCCCTCCTTTTTTATTTATTGCACAAATATCTAACAGTTAAAAAAGAAAAATTTCAGTACCATATCAATTGTCTTTCATATTTTGTGTTCCTCCTTTCCAGTGCTTTTCTATGTAAGTAAATATTCTGATGTACTTGTAAGTAATCACTCAGAGCATAATGTAATTTTGTCTTTGGTGTCTTAAAATTTTGCAGCCAGGCAAGAGAGGTTCACAGGGAAGGTAGGAACAAGTGATTATTCAGTGTGAGGATGGGAAGAAGATCAAAGATAAGTAAGGGCAATGATTGTATCCTTCCCGTGTCATTGCCCCTAGTCCCCAAGCCACCCTCCTGCAATCATGAGTATAGTGGTGTATTGTGGAAGGCAGCATGCCCAGTTTTCCAGTTTCAAAATATATTATTTAGCAGTGAGGCTTAACTCCCAGTAAATGAAGGGGTCTGTGAGTAGGGGAACCCTTCAGACTGGTTATATTATGAGCTGTAGAACTGTTGCCATTTTGTTGTTCCCAGTTGTGCCCATAAAGAGATGTGTCTGAGCTGGAGACTTAGGCTCAGATGGGGAACAAACAGCCAAGTACCAACCTTAGTTTGGTCCAATAGGTGAATTTTAGCAACTCTCTAAACTCAGCTCTATACCTGTAAGACTCAGAAGTGATACATATAGTGATAGAAAAAAATACTTTAGAAAATAGAAAACAACTTACTGGTTACTCTGCTAATGTGATGGAGGTTGCAGAATGGAAAATGAATGAATGCAAAAAAATACAGCTGGATTGTGTGCCACAAGTTTATTACTCAATAAATATTCTGTGGTTTGA