Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name NANOG
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name Nanog homeobox
Also known as -
Coordinate chr12:7789402-7799146
Strand +
Gene summary The protein encoded by this gene is a DNA binding homeobox transcription factor involved in embryonic stem (ES) cell proliferation, renewal, and pluripotency. The encoded protein can block ES cell differentiation and can also autorepress its own expression in differentiating cells. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2015]

Retrocopy(s) from NANOG

Retroname Coord Strand Genomic Region ENSG
NANOGP7 chr14:91604184-91605462 - Intragenic
ENSG00000258774 UCSC
NANOGP11 chr15:35083222-35085308 - Intergenic
N/A UCSC
NANOGP2 chr2:222452182-222453477 - Intragenic
ENSG00000228670 UCSC
NANOGP3 chr6:53418562-53418738 - Intergenic
ENSG00000271373 UCSC
NANOGP4 chr7:29212120-29213887 + Intragenic
Intragenic
ENSG00000237065 UCSC
NANOGP5 chr9:100174998-100176167 + Intragenic
ENSG00000231697 UCSC
NANOGP10 chrX:43407041-43408746 - Intergenic
ENSG00000231750 UCSC
NANOGP9 chrX:65771762-65773816 - Intergenic
ENSG00000231809 UCSC

Expression

Transcript Sequences

>NM_024865.4
ATAAATCTAGAGACTCCAGGATTTTAACGTTCTGCTGGACTGAGCTGGTTGCCTCATGTTATTATGCAGGCAACTCACTTTATCCCAATTTCTTGATACTTTTCCTTCTGGAGGTCCTATTTCTCTAACATCTTCCAGAAAAGTCTTAAAGCTGCCTTAACCTTTTTTCCAGTCCACCTCTTAAATTTTTTCCTCCTCTTCCTCTATACTAACATGAGTGTGGATCCAGCTTGTCCCCAAAGCTTGCCTTGCTTTGAAGCATCCGACTGTAAAGAATCTTCACCTATGCCTGTGATTTGTGGGCCTGAAGAAAACTATCCATCCTTGCAAATGTCTTCTGCTGAGATGCCTCACACGGAGACTGTCTCTCCTCTTCCTTCCTCCATGGATCTGCTTATTCAGGACAGCCCTGATTCTTCCACCAGTCCCAAAGGCAAACAACCCACTTCTGCAGAGAAGAGTGTCGCAAAAAAGGAAGACAAGGTCCCGGTCAAGAAACAGAAGACCAGAACTGTGTTCTCTTCCACCCAGCTGTGTGTACTCAATGATAGATTTCAGAGACAGAAATACCTCAGCCTCCAGCAGATGCAAGAACTCTCCAACATCCTGAACCTCAGCTACAAACAGGTGAAGACCTGGTTCCAGAACCAGAGAATGAAATCTAAGAGGTGGCAGAAAAACAACTGGCCGAAGAATAGCAATGGTGTGACGCAGAAGGCCTCAGCACCTACCTACCCCAGCCTTTACTCTTCCTACCACCAGGGATGCCTGGTGAACCCGACTGGGAACCTTCCAATGTGGAGCAACCAGACCTGGAACAATTCAACCTGGAGCAACCAGACCCAGAACATCCAGTCCTGGAGCAACCACTCCTGGAACACTCAGACCTGGTGCACCCAATCCTGGAACAATCAGGCCTGGAACAGTCCCTTCTATAACTGTGGAGAGGAATCTCTGCAGTCCTGCATGCAGTTCCAGCCAAATTCTCCTGCCAGTGACTTGGAGGCTGCCTTGGAAGCTGCTGGGGAAGGCCTTAATGTAATACAGCAGACCACTAGGTATTTTAGTACTCCACAAACCATGGATTTATTCCTAAACTACTCCATGAACATGCAACCTGAAGACGTGTGAAGATGAGTGAAACTGATATTACTCAATTTCAGTCTGGACACTGGCTGAATCCTTCCTCTCCCCTCCTCCCATCCCTCATAGGATTTTTCTTGTTTGGAAACCACGTGTTCTGGTTTCCATGATGCCCATCCAGTCAATCTCATGGAGGGTGGAGTATGGTTGGAGCCTAATCAGCGAGGtttctttttttttttttttCCTATTGGATCTTCCTGGAGAAAATACtttttttttttttttttttgaaacggagtcttgctctgtcgcccaggctggagtgcagtggcgcggtcttggctcactgcaagctccgtctcccgggttcacgccattctcctgcctcagcctcccgagcagctgggactacaggcgcccgccacctcgcccggctaatattttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctccctaacagctgggatttacaggcgtgagccaccgcgccctgccTAGAAAAGACATTTTAATAACCTTGGCTGCCGTCTCTGGCTATAGATAAGTAGATCTAATACTAGTTTGGATATCTTTAGGGTTTAGAATCTAACCTCAAGAATAAGAAATACAAGTACAAATTGGTGATGAAGATGTATTCGTATTGTTTGGGATTGGGAGGCTTTGCTTATTTTTTAAAAACTATTGAGGTAAAGGGTTAAGCTGTAACATACTTAATTGATTTCTTACCGTTTTTGGCTCTGTTTTGCTATATCCCCTAATTTGTTGGTTGTGCTAATCTTTGTAGAAAGAGGTCTCGTATTTGCTGCATCGTAATGACATGAGTACTGCTTTAGTTGGTTTAAGTTCAAATGAATGAAACAACTATTTTTCCTTTAGTTGATTTTACCCTGATTTCACCGAGTGTTTCAATGAGTAAATATACAGCTTAAACATAAATCTTTGTTAAATTTTTGGTTGGGGTGGAGAAGGAAATTAGCTGAGGACACTGCTATCTtagaaatgcatagaaatagctgagcgtggtggcctatgcctgtagtcccagctatttgggaggctgaggcaggagaatcgcttgaacctggtaggtggaggttgtagtgagccaatatcacaccactgcactccagcttgggcgacaagagcaaaactcccatctcaaaaataaataaataaataagtaaataaatgaataataaataaataTGCCAGTTTTAGAATGAATGAATAATAAATATGCCAGTTTTAGAAAAAAGGgcacttacgtgcattgtacatgtgcatctacaaatgtaatgggttattTCCGTGTATGAATCTGTAATTGATGCTAACATTTAAAGTTTCATCAGAGGCCTATATGTAAGTAAATTCTAAGGCTAGTTGAAACAGATTTATGTTCTCACCTTAAGAGCAGCTACGCAGGCATCTGTGAATTATACTAATAATCCTTTACTGTCCTTTTCCCATCTTGTGCCTGCCCTAAATGTATCTGATCTGAGAGCACGTCCCTTCACTCTGAAGCAGCATGATGCAGGTTATCAGAGTGGTTTTTTCCAGTCTTTTCTCTCATTATTTCCCCAATTGTCCAATGTTACTAAGACTATCCAGTCTAATTCCAAGTGttttttttttgttttattttgtttttttttaagactggagtcttactctgttgcccaggctggagtgtagtggagcgatctcggctcaccgcaacctccgcctcccgagttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggggtgagccaccatgcccagctaattgtatttttagtagagacagggtttcactatgttggccaggctggtcttgaactcctgacctcatgatccaccagccttggcctcccaaagtgttgggattacaggcgtgagccactgcgcctggccTATCGtttgtttttttagacagtctctctctattgcccaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcctgggttcgagcaattctcctgcgtcagcctcctaagtagctgggattacaggcacccaacattacacccggctaatttttggtatttttagtagagatggggtttcaccatgttggccagcctggtctcgaactcctgacctcaggtgatccacctgactcggcctcccaaagtggtgggattataggtgtgagccaccgtgtctggGCAAtttttttttttttttttgagatggaacttcacttttgttactcaggctggagcacaatgatgcaatctctactcactgcaacctgcacctcccaggttcaagtgattctcttgcctcagcctttcgagtggctggtattacagggatttgccactatgcccagctaattctttgtatttagtagagatggggtttcaccgtattgaccaggctggtctcgaactcctgacctcaggtaatccaccctcctcggtctcccaaagtgctaggattacaggcatgagccacagtgcccagccttcttttttatttttttaagacgggcttattctgctgctcagactggggcttagtggcaccatttcacctcactgtagcctcgacttcccggattcaagcaatcctcctgcctgagtctctcaaatagcccagactataggtgcacaccaccatgccagctaacttttgtgtttttaggagagacggggtttccccatgttggcctggctagtctcaaactcctgagctcaagcagtctaccagccttggcctcccgaagtgctgagattacaggcatgagtcaccagcctagccCTGTATTATGTTTTCTGAACTTTTTTTTTTTTAATCACCCAGTATTAATCTTCAACCTCTTGGCAGGTAAGAATTTAGAGATCTATTTGGAATAATCTTTAAAGTAACAATAATAACTACAGTCAAAAGCAGTAAGATTAGTGggccaggtgccgtggctcacacctgtaatcccagcacttcgggagaccaaggcaggtggatcacctgaggtcaggagttcaagtttagcatggccaatatggcgaaaccctgtctctactaaaaatacagaaatttgccagaggtcttggtttgcgcctgtaatctcagctacttggaaggcggaggcaggataatcacttgaacccgggaggttgcagtgaccccagataatgccaccccactccagcctgggcgacagagcgtcactgtctcaaaaataaacaaaaaTAATAGGAGATTAGGCAAAAAGGATAGTACAAGGCTCTCTGTTTAACATTTCTTCCTTTCTCTAGAAAATTTTCCTTTCTTTTCCCAAAAGGAGGTGTGTGTTACTTCCAATGCTATATTTTAGTAGCTTTACCATATTTTAGTTTTTAAAATTCATTattttgatttctcagctttcattttcatttcagtttGTACCTGAAGGAGAGAAGCATGGATTGAATTTGCCTGGGTTTTCCGAATTTCATAATATAAATTTAAAACTCAGAAGTGGGAGGAATACAGGCCTTGATTAGTGAATTTCAAGCTCAGTTCTCGGGGTGAAGGACAAGGTTAATTCTACTCTGAGTAATTCTACCGTTCAGAAAACCTGGTGTGTCTACAGGAAAAAATACAGGCTGTGACTACAAACCTAAAAGTAAAGGCAAACAACTGCCAGACAGAGGCAGGAAAGTGGGGGAGAGCCCTTGGTAAATATTGCATGCCTCCTGGGGCCCCCATGGGCTTTGACTCAAGGGGGAGATGAAGGGAATTTGTTAAAGAAAGAAGTCACTGGGACAGACAAAAGCTTCCGGCACAGGAAGTTAGTTCGACTAAGGATACCGAAATGTAGGAATTTGAATGGGTTCCTGGGTGTGAGGTTGAAGTGAAACTTGATTGAAAAGAAGCTGCTGGTGGTGAGTCTCTCCTTAAGCTATTCCTGGCTTCTGGGTAGTTGGTGTAAACTCTGTGGTCCTTGAATAAAGTGTGCTTGAGAATTTTA