Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name STN1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name STN1 subunit of CST complex
Also known as AAF-44|AAF44|OBFC1|RPA-32|bA541N10.2
Coordinate chr10:103877569-103918184
Strand -
Gene summary OBFC1 and C17ORF68 (MIM 613129) are subunits of an alpha accessory factor (AAF) that stimulates the activity of DNA polymerase-alpha-primase (see MIM 176636), the enzyme that initiates DNA replication (Casteel et al., 2009 [PubMed 19119139]). OBFC1 also appears to function in a telomere-associated complex with C17ORF68 and TEN1 (C17ORF106; MIM 613130) (Miyake et al., 2009 [PubMed 19854130]).[supplied by OMIM, Nov 2009]

Retrocopy(s) from STN1

Retroname Coord Strand Genomic Region ENSG
STN1P1 chr5:155397231-155398802 + Intergenic
 ENSG00000271477 UCSC

Expression

Transcript Sequences

>NM_024928.5
GGGGTCGTCGCCGCCAGCGGCTCCGAGCGCCGGAAGGGCCAGGTCTCAGGGCTCCTGGAGCTGCAGGCGGCGGGAGGGGCTACAAATGCTTGACTCAGTGATGCAGAACCTTTCAGAGTTAGCTGGAAGCCACAGCCCTGCCTCTTGATGCAGCCTGGATCCAGCCGGTGTGAAGAGGAGACCCCTTCCCTCTTGTGGGGTTTGGATCCTGTGTTTCTAGCCTTTGCAAAACTCTACATCAGGGATATCCTGGACATGAAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTACAATGGACATCCAATAAAACAGGTAGATGTCTTGGGAACTGTCATTGGAGTGAGAGAAAGAGATGCTTTCTACAGTTATGGAGTGGATGACAGCACTGGAGTTATAAACTGCATCTGCTGGAAAAAGTTGAATACTGAGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGCTCAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAAAACAAAGATAGAGATCGGGGACACGATCCGAGTCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGATTCATGCCACCACTTACTATAAAGTGGACGACCCAGTGTGGAACATTCAAATTGCAAGGATGCTTGAGCTGCCCACTATCTACAGGAAAGTTTATGACCAGCCTTTTCACAGCTCAGCCCTAGAGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTGAAAAAGCCAAAGAATTCCTCATGGAGAACAGAGTGCAGAGCTTTTACCAGCAGGAGCTGGAAATGGTGGAGTCTTTGCTGTCCCTTGCCAATCAGCCTGTGATTCACAGTGCCTCCTCCGACCAAGTGAATTTTAAGAAGGACACCACTTCCAAGGCAATTCATAGTATATTTAAGAATGCTATACAACTGCTGCAGGAAAAAGGACTTGTTTTCCAGAAAGATGATGGTTTTGATAACCTATACTATGTAACCAGAGAAGACAAAGACCTGCACAGAAAGATCCACCGGATCATTCAGCAGGACTGCCAGAAACCAAATCACATGGAGAAGGGCTGTCACTTCCTGCACATCTTGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGAGCGAGGCTGTGCTGCAGCAAGTTCTGGAGCTCCTGGAGGACCAGAGTGACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACCTCATAATAAACTATAAAATATAGTCATCTTGGGAATGGGATTTGGCATAAATGTTGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTGTTGAGCTCCTGGCTGGACTGTGCGTTGTTCGCAGAGCAGAATGGGGAGGAAACAGTGTTGGCAGCTTAACTGATGTGTGTGGTTGGAGTCTCTTCCATGGCAAAGGGACACCACAGGGTAGTGAACATTCAGGAACTGAGGGGCATATGGCCTGATCACACAGTTCTAAGCTTTTCAAAACTTCAGGTTATCAGAGACCTTCCTGTGGGCCTCTCTTGCTGGCTAAGAACCGGTTTAGGGGAGTAGTTCTCCCTGGATGAGTGCTTACAGTTTCTGTGGCTCAGTTACCAGCAGTGGGGTTGAGACCTGGGTCGATGCTCTTTACAGGCCTGCCCAGAGATGGGAATAAACAGGGATCCACAGCGTGACTATGTGTTTGTCATTTTCCTTTTATTTCCTTGGGAATCGAAAGGTGTCCCAGTACATTTCCCTGCACTTACAGAGGTGCATGACTAAATACATTGTCCCTCGATGCCCCTGAAGATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTGGTAGATGTTATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCATGCTTTTGCTCAGAATGACAAGGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGACAAATCCAGCCAGCAAAAATAAAGTGTGGAGAAAGATTTGGAGTTAATTACAGTCATTTCACAGAAGGCACTGCCTTCGTCTGCTGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAGGCCTGGAGAGTTGCTCCTCTCTCCGTGGAAACAGGACAGTCTTTATACGCAGAAGTCCGCTGCAGCTCGATACGTCAGGCTGAGAGCTAGAACCAGTAGATTGCCTCCTGTCATAGACTTTTGTAATGATGCAAACCTTTGCTGATTTCTAACAGTGATTATGTAGTGGCTGCCCTGCATCTTCTCTGTGTACAGAAGGGTCCCTAGCATAGAGTCTGCCTGGAATGATGTCCTGGGCAGTTCTTCCTTGAGGTCAGCAGCTGTTCCACGTTGAATGCATCTGATTAGTGGGGCTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGcatacccttgcctatagcaactctgctcttaggggtttatctcaaggagatggctacacaagtgtgaaaggatggttgcacaaggtgttcattgctgtataatctagaattctatattggggaaaatacctatagggaaaaagttaattacggttcttgggcacaatgaaatactatgcagctatgaaaaaaatgatgaaAGCAGACAGACAGTGTTGCCATGGCACACTGTCCCTAGTAGATTTAGTGGGAAGTAGATAGAGTTATAGATCTGTTTCTATAGTATAACACCATTATCTACAGCTCCCTGTGTGTATGTATATATCCGTAGAGAGAGTGTATATTTCTGCATGGAGGTCTTtataaatgtagcacatgtacatatatatatatataCACACacacagtcgaccactcccttctcctggaagtactttccgcgtttggctttcaggacaccaagctctctggttgctccttctcaggttcctttgttcagtgctctgcctccctgaggactcagtcccagacctcttttctatctggcttgctcactggggtgtctccagcagccacatggattataccatctacatgctgtctaacacctcagtttaaacccagaatgggcctcttccctgaactgcagacccctatattcagtttgctactgacatctccacttaggtctctaatggacatctcagatttcacaggcccaaagccaggctcccaattactcctgaccccaggcttgctcctgatagtgacatgaggcagccaaatgcctaggcagagaggggagggtcccaaatgaaaccccacgttcaagcaaagatcagcctgaaggctaaaagaccagattgctggtcctggatgaaacccaccacgcagagtgggaacttctgttcctgtttgcccaccctttcccaattgttctttctgaataacgccttaaccaatcgaatgttgccttttccagtaatacctacagcctgcccctccccccattctgagcccataaaaagacccagactcccccatattaaggggactttcctgcctttgggtagggggaccacccccacgtctcctctctgttgaaaactgtttcatcactcaataaaactcccagctttgctcactcttccactgtcagcacattctcattcttctttggtgctgggcaagaactcaaccagtgtggaagccatacttggcccaggcgggtgaagtgggcgggccgtctcctgcagcaggtagcatggtcaagcgaggcccaggtgggccgtcaccagccagaggtccctggcttgcaaagtgaccgagaaaaaaatcctgtgccactcctttggaaaatgtccctgattcaggaagaggtagctccatccagttgctcaaaccaaatccattggcttctttctttctatcatacctcacatccaatctgtctgcaagtcttttggctctaccttcagaatatctccagaatcttaactgcttcaccctcctccccggcctcctcagtcctctctgcttccgccctggcccctcttgggctgttcacagcacagcagctgttgccaccctgttaatgctcccactctcctacagccttcggtcttgccccaggtaggagcctgaggctgcacagaggtcagcacggccccgcttaccctgccctcccagcccagccgcacgggccttgcacacatgcctcggcatattcctgccttagggctggtgctcctgctatttcctcttcccaggtaaccatgtgaagtgcctccctctgccctctttccagcctttacttgagtgtcaccttctcagtgaggcctgccctcattcctctttcgctgtttgcaacccatctcctgtcccccttcccagaactccctttcctacttcgtttttcttcacagtacttgatactgcctaacacactccatggtttcttacttgccctgtttattattttcccccaatagacagaatgttccatgatggcagaattctctgttttgtttccttccatgtccccagcacctagaacagtgcctgacgcatCTCCTAAGCAATACGACCAATAagtatgtgtctggctgccttccggctgccagtgtctgcctctttcctaggggcagtggttgcgggggtgctttctcacatgtcttagtaggctgtgcaggctggaagtgctcagaagtcacacccccagggagcagcctcagccaacagcaccttggctgtaaatgccccagctccctcgccctcaggtaagcattgctgaggcacacgttccatactcttttccacagttcctccgtgggactgagcaccacccagccacccacaggagcagctaacctgataaccaccagcctcaccctccctgccttacttccccgctcccctttaccacatgctgacctcccagatgcatttcttgctttccggtctctgtctcaggattggctcctggatgaacacaaactaacacTATGTTCACAAATATATTTGGGAAATGCTGGATGAATAATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCTTTGGCATTTTTATAATTAGCAAGtgctcactcttccactgtcagtacattctcattcttcttgggcgctggacaagaattcaaccggtgtgtaagccagactcggcccgggcagTCTCAAACTCCTGACTCCTTATATAATTTCTACAAAAATTATAAAGCTATTTCCCACTCCCCACCCCACATTCATGTAACCTGAAGCATGAGTAAACCAAGAATGAGGTAGGCCTCTGTCTTCTAAGCAACATCAGAACTCTAAGAACATGAGGGACTCTTAGAAAACTCTCTGGAGCTAACCACAGCTGGGTCACTGCTCATGTACTGAAGACCAGCCAGAGGGTTCCCCTGAAAAGGAGGGAAACTGAGCAAACATTCTCCAGTTCTCTTAGTGTGCACATGTTTCAGGAGGTGTGAACCCCACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTGCTACTGTCTGGTCAAGGATTTGTTTGAAGAGCCATGATTATGCCCATATGGTAAGCCACCAGTGCTCCCCATCCCTGTAAGACACTTCTTTCTCATTATTTTCTCCTCTGATGGTGTGCCAGGATGCTGGCCAAGAGAAGCCAAGTGGAAAGAAGGCTGTTCAGTGACAAGGAACCTAAGACTTAGTGCCAAGGACTGAAACCAAGTAAACTTGTAATTTTCCATGATGGAAACATCTACACTTTCTCATTAGTGGCCTCTACAGCAGTTGCCCCAAAGAAGCGTCTCATTGTTTTTTTACTACATTTATGTGAAGCATACAGGCAAACTCAGAAAGACTGTGATAAGGCTCGCCAGAGATGCCTGCACAGGTGCTGGGGGAAAAGCAGGACCATCCTGAAGGGAGATGGTGTCTGTGGACAAAGAACTCTGCAGTGGTTCTTATTTGCATGATTTCTGCTGGTGGAGGCTGTAAATGTGAGCTCAAACTCCCACATAAGTGAGTTTTCATTGTAATCCAGAATGTTTTTAAATCACCCTACTTCTATTGAACTTGCACTATCATCTGTTAACCTCTACTGTATTTATTAAATAAACCTGAATAGGTAAATCACA