Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PAAF1
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name proteasomal ATPase associated factor 1
Also known as PAAF|Rpn14|WDR71
Coordinate chr11:73876699-73931114
Strand +
Gene summary This gene encodes a WD repeat-containing protein involved in regulation of association of proteasome components. During HIV infection, the encoded protein is thought to promote provirus transcription through recruitment of the 19S regulatory complex. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jun 2012]

Retrocopy(s) from PAAF1

Retroname Coord Strand Genomic Region ENSG
PAAF1P1 chr12:20845046-20845612 + Intragenic
Intragenic
ENSG00000256157 UCSC

Expression

Transcript Sequences

>NM_001267806.2
GATCGCAGCCCCGTTGTGCCCGCAACGCCTCCTGAAGAACGCGGAAGGATGAAGGGGAGGCCTGGCTGAGCTGTCATCCCCCAGGGAAACCATCTTTGTATGGCAGCCTGACTTGTCAAGGAATTGGCCTAGATGGCATCCCAGAGGTTACAGCTTCAGAAGGATTTACTGTGAATGAAATAAACAAGAAAAGCATTCATATTTCATGTCCAAAGGAAAATGCATCTTCTAAGTTTTTGGCACCATATACTACTTTTTCCAGAATTCATACAAAGAGTATAACATGCCTGGACATTTCCAGCAGAGGAGGTCTTGGTGTGTCTTCTAGTACTGACGGGACCATGAAAATCTGGCAGGCTTCCAATGGAGAACTCAGGAGAGTATTGGAAGGACATGTGTTTGATGTGAATTGTTGCAGGTTTTTCCCATCAGGCCTTGTGGTCCTGAGTGGGGGAATGGATGCCCAGCTGAAGATATGGTCAGCTGAAGATGCTAGCTGCGTGGTGACCTTCAAAGGTCACAAAGGAGGTATCCTGGATACAGCCATCGTTGATCGGGGGAGGAATGTGGTGTCTGCTTCTCGAGATGGGACAGCACGACTTTGGGATTGTGGGCGCTCAGCCTGCTTGGGAGTCCTTGCAGATTGTGGTTCTTCTATCAATGGAGTGGCGGTGGGTGCTGCTGACAACTCCATAAACCTTGGCTCCCCTGAGCAGATGCCCAGTGAACGGGAGGTTGGAACAGAGGCCAAAATGCTGCTCTTGGCCCGGGAAGATAAGAAACTTCAGTGCTTGGGACTACAGAGCAGGCAGCTGGTGTTCCTCTTTATTGGCTCAGACGCTTTCAACTGCTGTACTTTTCTCTCTGGCTTCTTGCTATTGGCTGGGACTCAAGATGGAAACATTTATCAGCTGGATGTGAGGAGTCCAAGGGCTCCGGTACAAGTCATCCACAGATCAGGAGCACCAGTTCTATCCCTGCTAAGTGTCAGAGATGGATTCATTGCTAGCCAAGGTGATGGAAGCTGTTTTATTGTCCAGCAAGACTTAGACTATGTCACTGAGCTCACTGGGGCTGACTGTGACCCTGTGTACAAGGTAGCCACATGGGAGAAGCAGATCTACACATGCTGTCGAGACGGTCTTGTACGACGCTACCAGCTTTCTGACCTCTGACTTCTTGGAAAGAGCAGTCCCGGTTAGTGAAAAGGTTTGACCCTGATCAACAATGAGCAGAAACATCATCAGTCCTTCCCAAGGACCATGGCGTTTAATGTCTTGGGCACCCCTTGGAAATCACAGAAAGTCAGCTGTACTGGCCGTGTGGAACTCTCATCCCAAGACCTACTTTGAACTGAGTAAGAAGGTCATTGTGCCCACTGCATTTGTTCCAACTTCTCCTTGTATAAACTCACCCCAGCAACACAGGGCAAGGATATAGATGCTTTTAGTTTGTTCTTAAACCAGTTTTGTTAAATGTTTACAAGGACCTCAGTACTAAAGCCTGTTCTCTGGAGGAAATAAAGAAAATATGTTTGGAGGTGCCTGAATATGAAGAACTTTGTTAAATACTCTTACTCCAGCAAAAAGTTGGTCAGGACGATGGAATTCCTTCCTCAGCACTCCCTGTTGCCTGGCCATAGAGAAGGCCTGCTTGGCAGTAGCAATAAATGTCCTGTAAGCTGCCACCTGGGAGAGATTCTTATGCAGGTggtaaccaactgtcccagtttgcttggaactaaggggttttctgtgacttgaaactttcaatgccaaaactggggcagtctcaaaccaacatgattggtcagcctaTATGTAGGTGAGGAAACTGAATCATAAGCATTGTAAAGGcattggctgtcaaagtgtggttcttagaacagcagcatcagtatcacctgggaacttgacaggaaatagaaattgttaggcccaatcctagacctaaatcagaaattctacgggtgcagccagcagtctgtattttaacaagcattccaggtgattctgatgtatgctaaagcttgagagccactgATCTAGAGGAAGAGATGGTGGAGGGCACTTTAGTCACAGCTGGAACCCAGGGCTCAAAATGACAAGATCGGTCTgtaggagatgaggccacagaggttggcagagcccaaatagtgaaggagcacgaatgttagctaaggagctcagactttacgtggttggcagtggggaaccactgaagggttttaagcaagagaatggcatggtcACCTCCTTTTTTCTCTAAacataaaaatggaatcataatgtatgtattccatggcttattttcacttaatgtctctgagattttccatctcagtacatgtagacgttcctcattcttttttaacaatgtccagaatatggataccatattatttaTATTTTTGAGATTATTAGAgaaaagtttcttgaaagatgtaacacttgagctgggacatgcagattaagATTTTTATTTATTTAACGGAGGAAGGTCATTTCTGGCTGGGGTAATAATGTTGTTGACAGAGttcttttttttgttttttttgagacggagtctcgctctgtcacccagactggtgcgatcttggctcactgcaacctccacctctcaggttcaaacgattctcctgcctcagcctccctagtagctgggactgcaggcatgcaccaccatgcccggctaatattttttttgtatttttattagagatggggtttcaccatgttggccaggctggtctcgaactcctgaccttgtgatccacctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgtacccggccGGCCACCAGAGTTTTTAAAGGCGTATTCTCATGTAAAttttttttttttaaagacagggtcttgctctgttgcccaggctggaatgcgttggcatgattacagcttctgccttaacctcctgggctcaagcaatcctcccacttcagcctcccaagtagctgaaaccatgggtgcacaccaccacactcggctaattttttaaattttttgtagagacagagtctcaccatgttgcccaggctggtctcaaactcctgaactcaagtattcctcccaccttggcctctcatagtgctggcattacaggcatgagccacggcactcaaccAGGAACTTTGTCTTAACTTTAAATCCCATTTTTTTCTACAACACCCTGTTACTTAAACCAAAGTGTAAAAAGAAAATACTGCAATTCATTTAATATCTACTCTGTTCTAGATACTATATTTATATATCTAATTCTTACAAGACTCAAAAAGCGAATGTTATTATTTGTTTTATTCCGATAAGGAAACTGAGACTCAATACATTAAATACCAGAGGCTTCATTTGGACCTTGGACAGCACCTTCTGCTGCACTGTGTAATCACAGGCAGGTAGCAAGAGACTTTTGTGACTAGAGCAATTTCATTTCAAGGTGCAGTTTGTGACAGGGTCAGGTAGACCAGAATGGACATATTCCAGAACTTAGAAACATTAAATCCTAGGAGCTCCAGGTGGAACATCTAAGAAGTCAGATTAAGAAAACAGGATGAggctgggcatggtggctcacgcctataatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacagaattagccgggcatgatggcgcatgtctgtaatcccagctacttgggaggctgaggcaggagaatcacttgatcccgggaggcagaggttgtggtgggctgagattgcgccattgcgctccagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaagaaaaCAGGATGAAATGggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacaaggtaaggagattgagaccatcctggctaacacagtgaaaccctgtctacaaaaaatacaaaaaaatttagccaggcatggtggcaggcacctatagtcccagctacttgggaggctgaggcaggagaatggtgtgaacctggcaggcagagcttgcagtaagctgagatcgggccacagcactccagcctgggcgacagagcgaggctctatctcaagaaaaaaaaaaagaaaaaaagaaaaCAGGAAGAAatgttgtcatttatttgtagaatctgaaacatttgaactcatagaagcagtgagtggaaGAACCAgcgtggtggctcacgcctgtaatcccagcactttgggaggctggggtgggtggatcgctggagcccaggaattggagaccagcctgcacaacatgaggaaactctgtctctactaaaaatacaaaacttagccaggtgtggtggtgggcacctgtaataccagctactaaggagactgaggcaggagaattgcttgaacccaggaggtggagggtgtagtgagctgagattgcaccactgcactccagcttgggcaacagagcgagactctctctcaaaaaagaaaaaaaaaatatgtatatatatatgtatatatatatatttatatatgtagaagcagtgagtagaatggtggttacagagactcggggaggaggaatggggaaatgatggtcatagggtgcaaagtctcaggaggaatatattgtgttttgagatctattgcatagcatggtagattgctaagagtaaatttcaaatgttctcaacccaaaaaatgttaagcatttgaggtgatggatatgttaactggcttcatttaattattccatattgtatttataagtcacaataggactttgtggcccataattataaacaagtataaattgtccatttacaattaaaaatcaaTTAAAAGAAAA