Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Cwc22
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name CWC22 spliceosome-associated protein
Also known as B230213M24|mKIAA1604
Coordinate chr2:77711503-77776705
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in cytosol and nuclear speck. Predicted to be part of U2-type catalytic step 1 spliceosome; U2-type catalytic step 2 spliceosome; and U2-type precatalytic spliceosome. Is expressed in embryo. Orthologous to human CWC22 (CWC22 spliceosome associated protein homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cwc22

Retroname Coord Strand Genomic Region ENSG
Cwc22P2 chrX:107490404-107493098 + Intergenic
 ENSMUSG00000081560 UCSC
Cwc22P1 chr2:83785991-83789002 + Intergenic
 ENSMUSG00000094125 UCSC
Cwc22P3 chrX:110481809-110484369 + Intergenic
 ENSMUSG00000083898 UCSC

Expression

Transcript Sequences

>NM_001290740.1
ATGTTCTTTTCTCGTGTTCTTTGTAAGGAATGACAGTGTTACTAGCTGGATTGCTTTGACTCAAGGTGTTACTATACCGCATTATCATTAATCGTATCACATACCTGCCAATTCACTACCAGTTTTTCACTAATTTCTCGCGCTACTTTCACCCGGGAAAGGGAACTGACGCTCTTCCGGTATGATGGCGGCGCGGTGGAGCTTTAGGTGACGtgtagagacagaaaaagaaaactgtcGAGGAACTCAAACCACTGAGCACGTGTCACTTGAATGAACCTGAAGAATCTGGGGCAGCTGACAGCAGAAAATGAAAAGTAGTGTGGCACACATGAAGCAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAGCTCCTCCCCAGAAGACAGATACACAGAGCAAGAGCGGTCCCCCCGGGATAGAGGTTACTCTGATTACAGCCGGTCAGACTATGAGCGATCTAGAAGAGGATACTCTTACGATGACAGCATGGAATCACGAAGTAGGGACCGAGAAaaacgcagagagagagagagagatgcagatcaTCGGAAACGGTCCCGGAAATCGCCATCCCCTGACAGGAGTCCAGCCCGAGGCGGAGGGCAGAGTTCTCCTCAGGAGGAACcgacatggaagaagaagaaggatgagCTGGACCCGCTGCTCACCCGCACTGGGGGAGCGTATATCCCTCCTGCGAAGCTCAGGATGATGCAGGAGCAGATCACAGATAAAAGCAGCTTAGCATATCAGAGGATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCTAATATAAGCATTATTATCCAAGAGCTCCTTCAAGAGAACATTGTCAGAGGGAGAGGATTGCTGTCCAGATCTGTTCTGCAAGCCCAGAGTGCGTCTCCAATCTTCACTCACGTTTATGCAGCTTTGGTGGCAATAATCAACTCAAAATTCCCACAGATTGGAGAATTGATCCTCAAGAGACTAATTCTTAATTTTCGGAAAGGCTATCGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCACATGAGGTTCTGTGCCTGGAGATGCTCACTTTGCTACTAGAGAGACCAACAGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAATGCAATCTTTGAACGCCTTCGAAACATTCTACACGAGTCTGAGATCGACAAAAGAGTTCAGTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGATTTAGTGGAAGAGGACGATCAGTTTACACATATGCTCCCCTTAGAGGATGACTacaatccagaagatgttcttaatgttttcAAGATGGATCCTAATTTTATGGAGAATGAAGAGAAGTACAAGGCTATTAAAAAAGAAATCCTTGACGAAGGAGACAGTGATTCAAACACAGACCAAGGAGCTGGAAGTagtgaagatgaggaggaggaagacgaggaggaggaaggagaagacgaGGAAGGAGGGCAAAAAGTAACTATTCATGACAAAACAGAAATCAACCTAGTCTCGTTTCGCCGTACAATCTATCTTGCCATTCAGTCAAGTTTAGATTTTGAAGAATGTGCACACAAGTTGCTGAAAATGGAGTTTGCAGAGAGCCAAACAAAAGAACTCTGCAACATGATACTTGATTGCTGTGCCCAACAAAGGACCTATGAAAAATTTTTTGGCTTGTTAGCTGGGCGGTTTTGTATGCTGAAAAAGGAATACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAAACAAATTGAGAAATGTTGCTAAAATGTTTGCTCACCTTTTATACACAGATTCACTTCCGTGGAGTGTTCTCGAATGTATAAAACTGAGTGAAGAGACCACGACATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACTGAATGCGAGGTTGAAGGATGAAACTCTCCAGccattctttgaaggtctgttaccCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGATGAACTGCGAGAACATCTGAAAAATACGCCCAAGGTCATCGTAGCCCAGAAACCAGAAGCTGAACAAAAGAAACCAGCCCTGACATCTTCATCTTCAGAGTCTTCCTCGGCGTCTGATTCCTCTGACTCAGAATCTGACAGCAGCGAGAGCAGCTCAGAGTCCTCTAGTGATGCGAgcgactcctcctcctcctccagcactcaGAGCTCTACCTCAGCTAAAGGTacaagaaagaagagacaagGGAAGGCCAGAGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGcgagaaggaggcagggaggaccAAAGGCACCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATCCCCTAGCAAAGCACATAGACGACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAgcggagagagagaagagattctTTTTCTGAAAATGAGAAGCAAAGAAGCCGAAATCAGGACAGTGATAATGTTAGAAGAAAAGATCGCTCCAAGTCAAgggagaggagtagaaggcattCTGGTCACAAGGGAGACGACGCCAGGTGTCAGAACAGTGCAGAGAGGCGCTGGGAAAAGCCTGGCAGACGCCCTGAACAGTCTAGAGAGTCAAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCAACAACACAGAAATAATCCTAATGACAACTGAACATGCCTTACACTTAATTTAGTTCAGTGTCTtttttacattgatgaattttataGAGAACTCTTGTATAAAGTACCTGTTTGTAaattttgaagatgttttctttttgacATGTTTTATAATTGATATATCTCAAGGTTCTTTGtgtaaaatcataaagaaaaggGATTCAACAAAAGGGTAAGTCTTATGTTTTGTGAATAAAAGGAACAAATGTTCATTGAatcattgtctttttttctaaaatatttttctttgtgtcaGTTTCTATGAATTACCATAATTATTAGTGGTTTTTATGTATAACAAAAGGCCAAAATAAATAAACGTTTTCTAGT
>NM_172667.2
ATGTTCTTTTCTCGTGTTCTTTGTAAGGAATGACAGTGTTACTAGCTGGATTGCTTTGACTCAAGGTGTTACTATACCGCATTATCATTAATCGTATCACATACCTGCCAATTCACTACCAGTTTTTCACTAATTTCTCGCGCTACTTTCACCCGGGAAAGGGAACTGACGCTCTTCCGGTATGATGGCGGCGCGGTGGAGCTTTAGGTGACGtgtagagacagaaaaagaaaactgtcGAGGAACTCAAACCACTGAGCACGTGTCACTTGAATGAACCTGAAGAATCTGGGGCAGCTGACAGCAGAAAATGAAAAGTAGTGTGGCACACATGAAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAGCTCCTCCCCAGAAGACAGATACACAGAGCAAGAGCGGTCCCCCCGGGATAGAGGTTACTCTGATTACAGCCGGTCAGACTATGAGCGATCTAGAAGAGGATACTCTTACGATGACAGCATGGAATCACGAAGTAGGGACCGAGAAaaacgcagagagagagagagagatgcagatcaTCGGAAACGGTCCCGGAAATCGCCATCCCCTGACAGGAGTCCAGCCCGAGGCGGAGGGCAGAGTTCTCCTCAGGAGGAACcgacatggaagaagaagaaggatgagCTGGACCCGCTGCTCACCCGCACTGGGGGAGCGTATATCCCTCCTGCGAAGCTCAGGATGATGCAGGAGCAGATCACAGATAAAAGCAGCTTAGCATATCAGAGGATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCTAATATAAGCATTATTATCCAAGAGCTCCTTCAAGAGAACATTGTCAGAGGGAGAGGATTGCTGTCCAGATCTGTTCTGCAAGCCCAGAGTGCGTCTCCAATCTTCACTCACGTTTATGCAGCTTTGGTGGCAATAATCAACTCAAAATTCCCACAGATTGGAGAATTGATCCTCAAGAGACTAATTCTTAATTTTCGGAAAGGCTATCGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCACATGAGGTTCTGTGCCTGGAGATGCTCACTTTGCTACTAGAGAGACCAACAGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAATGCAATCTTTGAACGCCTTCGAAACATTCTACACGAGTCTGAGATCGACAAAAGAGTTCAGTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGATTTAGTGGAAGAGGACGATCAGTTTACACATATGCTCCCCTTAGAGGATGACTacaatccagaagatgttcttaatgttttcAAGATGGATCCTAATTTTATGGAGAATGAAGAGAAGTACAAGGCTATTAAAAAAGAAATCCTTGACGAAGGAGACAGTGATTCAAACACAGACCAAGGAGCTGGAAGTagtgaagatgaggaggaggaagacgaggaggaggaaggagaagacgaGGAAGGAGGGCAAAAAGTAACTATTCATGACAAAACAGAAATCAACCTAGTCTCGTTTCGCCGTACAATCTATCTTGCCATTCAGTCAAGTTTAGATTTTGAAGAATGTGCACACAAGTTGCTGAAAATGGAGTTTGCAGAGAGCCAAACAAAAGAACTCTGCAACATGATACTTGATTGCTGTGCCCAACAAAGGACCTATGAAAAATTTTTTGGCTTGTTAGCTGGGCGGTTTTGTATGCTGAAAAAGGAATACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAAACAAATTGAGAAATGTTGCTAAAATGTTTGCTCACCTTTTATACACAGATTCACTTCCGTGGAGTGTTCTCGAATGTATAAAACTGAGTGAAGAGACCACGACATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACTGAATGCGAGGTTGAAGGATGAAACTCTCCAGccattctttgaaggtctgttaccCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGATGAACTGCGAGAACATCTGAAAAATACGCCCAAGGTCATCGTAGCCCAGAAACCAGAAGCTGAACAAAAGAAACCAGCCCTGACATCTTCATCTTCAGAGTCTTCCTCGGCGTCTGATTCCTCTGACTCAGAATCTGACAGCAGCGAGAGCAGCTCAGAGTCCTCTAGTGATGCGAgcgactcctcctcctcctccagcactcaGAGCTCTACCTCAGCTAAAGGTacaagaaagaagagacaagGGAAGGCCAGAGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGcgagaaggaggcagggaggaccAAAGGCACCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATCCCCTAGCAAAGCACATAGACGACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAgcggagagagagaagagattctTTTTCTGAAAATGAGAAGCAAAGAAGCCGAAATCAGGACAGTGATAATGTTAGAAGAAAAGATCGCTCCAAGTCAAgggagaggagtagaaggcattCTGGTCACAAGGGAGACGACGCCAGGTGTCAGAACAGTGCAGAGAGGCGCTGGGAAAAGCCTGGCAGACGCCCTGAACAGTCTAGAGAGTCAAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCAACAACACAGAAATAATCCTAATGACAACTGAACATGCCTTACACTTAATTTAGTTCAGTGTCTtttttacattgatgaattttataGAGAACTCTTGTATAAAGTACCTGTTTGTAaattttgaagatgttttctttttgacATGTTTTATAATTGATATATCTCAAGGTTCTTTGtgtaaaatcataaagaaaaggGATTCAACAAAAGGGTAAGTCTTATGTTTTGTGAATAAAAGGAACAAATGTTCATTGAatcattgtctttttttctaaaatatttttctttgtgtcaGTTTCTATGAATTACCATAATTATTAGTGGTTTTTATGTATAACAAAAGGCCAAAATAAATAAACGTTTTCTAGT