Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ckap2
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name cytoskeleton associated protein 2
Also known as LB1
Coordinate chr8:22658168-22675835
Strand -
Gene summary Acts upstream of or within negative regulation of microtubule depolymerization. Located in microtubule cytoskeleton. Is expressed in brain ventricular layer; cerebral cortex subventricular zone; and thymus primordium. Orthologous to human CKAP2 (cytoskeleton associated protein 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ckap2

Retroname Coord Strand Genomic Region ENSG
Ckap2P1 chr2:57161970-57163539 - Intragenic
Intragenic
ENSMUSG00000084292 UCSC
Ckap2P2 chr5:50057347-50059642 - Intergenic
ENSMUSG00000105540 UCSC

Expression

Transcript Sequences

>NM_001004140.2
CCGGCGCCGAGGCGCGCTCATTAAGCGATGGCAGAGTCCAGGAAACGCTTCCTTGGCAGGGCTGCGAGGAATCCCTTGCCGGTGACCCGGGACCTGCAGCTGCCCCCGACCAGGCGAGACCAGCCGGCCTTCCGAGaacaaagaaaacaaaaactcaaggAATATCTGTTAATACGAAAAACAGTGTTTCCATACAAACAAGAAAATCAGATATCCAGaGATCAGAAAATGATAACATCTGAGGATCGGGTCCAAGAAGGGAAAAAAGTTGTGAAACTCAAAACAGAAGTGGctgataaagaaaatattgaaagtacAGTTGAGAAAAACTGCATTCCATTAAAAGCTGGAGAAGTAACCAGCTCAGAAATACATAATTCAAAGGATAATGTTCAAGCTGTGCAGTTATTATCTACAAGAGATGATTTGCCAGGTCAGACTGTGACATTAGACCCGGCATGTCACCATAAAGACAATAAAAAGATGCAAATGACTGCAGAGAAGCCCAAACAAGACAGTAATGTGTCTAAAAAGCGAGTGCTTGGCTATTATCATGGCCAGATTGTTCAGTCTAAGATTAATTCATTTAGAAAGCTTCCCAGTGTCAAAGGCGAGAGTCTTACAACAACCAAGAAACTTCCCACTACTGTGTCTAAAGCCATGAAGGCTCAGAGTGAGCCTGCGAACACCGTCAGCGTAAAAGCCTCAACTACAGCTGCTGCCACCAAGTTTGCAGACGCTAAACCTGTGAGCACTGCGTCGAAGGACACACTTGTGCGACCACCTATCCGAAGCCTCCACAGTAGTTCCCACGGAGCTGCGAAACAGGGCCTCAGCAGGCCGCTTGCCAATGTTACAGTCAGAAAAGGGATGCTTGACAAGGAGTCACATCGATCAGAACCAGTTGTGTCCGTTGTCAAAGCCGGTTCTTCTCAGGCCCCATCAAGAAGCATAGCATCTAAAGATGCAGCCAGGACTGATTCGTCTAATACCAGACTGATGGTAAAGCCAAAAGATACTGACCAGCGCAGATACACGATTGCAGGAGCAAGTGTTCATAGATCAGCTCAGCTCAAGGACACCACCGCAGAGAGGAAAGCTCAGATGACGGAGTGGAGAACTGGCAAAGGAAAGGGGCTAAAACGACCTCCTCATTCAGTAGTCACCCAGGCTGAGCCAAAGGGACAAAGTGAAAACCCAGTTGGGTCCTTTTGGACTACCATGGCAGAAGAAGATGAGCAGAGATTATTTActgaaaaagtaaacaaaactatTTCTGAATGCCTGAACCTTATTAATGAgGGATGCCCAAAAGAAGAAATTTTGGCTACATTGAATGACCTGATTCATAATATTCCAGATGCCAAAAAACTTGTTAAATATTGGATATGTCTTGTACGTATTGAACCAATCACAAGTCCTATTGAAAATATTATCTCAATCTATGAGAAGGCCATCCTGGCAGGGGCTCAGcctATTGAAGAGATGCGTCATATAATCATAGATATTCTAACAACGAAGAGTCAAGAAAAAGTCAATTTGGGAGAAAATATTGAGGAGGCTCATGCAACCAAGGAACCTATCCAAGAAGTAAATGCTGATGCTAATGTAGGGTCAGGAAAACCAGGAGAGGAGAATGAACATCATGGCAAAGTTGAGGTGTATGAAGATGATCaagacaacaaaataaaagatccGGATTTAACAACTCCGGACTCAAAAACTGAAGCAGGTTGCATAATTCGATATAATGTATCTTCTACACCTCGGCTGCAAAGTATGAAAAAGATGCAACATGATAAAAATTCCACACTTAAAGAGCTAAAGTTCCTGACACCAGTGAGACGCTCACGGCGCATTCAAGACAAGACTTCACGACTGCCAGCCATGTTAAAAGACCACGACCCTTCTGTGTCTTCCCTGGAGCAGTTGTCTGAGTTGGGAGGGGATGCCTTTGTCTGCCGCCCTAATGCAGCACTGTGCCCTCTGTTCTTTGAGACCGACGTAGCGGAAGAGGAATAGGAGTCCCGAGTCCTGAGCAGTTATGGTTGTGTTACTCCTGTGGCCCTGCATGTGTACAACTTTATCGTAGGTCTGAAGTTGTCCGCATGCCTAAGTATGGTACAGGTAAACTCCACTAgcttgtttgttgtgtttttaaaatataatgttggCTGCTTCACTTTACTAATTACTTACagttaaagaaacaaaatcagaaaatgtagtctatataaatttatatttttacgtTGACTTTGTTCCTAATAcgtttataataaatatatatgtataatgttcCAATGACATTTCATTGATTGACTTATTTGATGATGGAATTGACTTTAGGACCCTACTGTGGGGCTATAGTTAGCTGCCTATGGCATTTATTTCAACAAATATGTTCTGGGGTCTCAGGATGTGCCCCcagaagagtgcttgcctaatgtGCAAGGCTCTGAATTCAGTCCTTAGCACCACAAGAAAAACTGCTTTGTAAAATGTCATTTAACCACAGTAACCAAATTTAAACTTAGTTTTTGAAGTATATTGCTAAGTTTGTATTACTTTTAGTTGTGATAAAATATACCTGACAGAAAC