Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Amd1
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name adenosylmethionine decarboxylase 1
Also known as Amd1a|Amd1b
Coordinate chr20:45384000-45399694
Strand -
Gene summary Enables adenosylmethionine decarboxylase activity and putrescine binding activity. Involved in S-adenosylmethionine metabolic process; spermidine biosynthetic process; and spermine biosynthetic process. Located in cytosol. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma. Orthologous to human AMD1 (adenosylmethionine decarboxylase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Amd1

Retroname Coord Strand Genomic Region ENSG
Amd1P1 chr2:215922330-215923556 - Intergenic
N/A UCSC
Amd1P2 chr3:141322889-141325076 - Intergenic
N/A UCSC
Amd1P3 chr4:152390089-152390308 - Intergenic
N/A UCSC
Amd1P4 chr14:51484468-51486403 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031011.3
GCTTACACAGTATGGCCGGCGACATTAGCTAGCGCTCGCTCAACTCTCTCTAACGGGAAAGCAGCGGACTACAAGAGACTGAACTGTATCTGCCTCTATTTCCAACGGACTCACGTTCAACTTTCGCTCACGAAAATAGCCGGGAAAATTTTATTAGTCCTTTTTTTAAAAAAAGTTAATATAAAATTATAGCAAAAAAAAAAAAAAGGAACCTGAACTTTAGTAACACAGCTGGAACAATCCGCAGCGGCGGCAGGAGCGGCGGGAGAAGAGATTTAATTTAGTTGATTTTCTGTGGTTGTTGGTTGTTCGCTAGTCTCACGGTGATGGAAGCTGCACATTTTTTCGAAGGGACCGAGAAACTGCTGGAGGTCTGGTTCTCCAGACAGCAGTCCGACGCAAGCCAGGGATCTGGGGACCTTCGTACCATCCCAAGATCCGAGTGGGATGTCCTTCTGAAGGATGTGCAGTGCTCAATCATAAGTGTGACAAAGACTGACAAGCAGGAAGCTTATGTACTCAGTGAGAGTAGCATGTTTGTCTCCAAGAGACGTTTCATTTTGAAGACATGTGGTACCACCCTCTTACTGAAAGCACTGGTTCCCCTGTTGAAGCTTGCTAGGGACTACAGTGGGTTTGACTCGATTCAAAGCTTCTTTTATTCTCGTAAGAATTTCATGAAGCCTTCTCACCAAGGGTACCCACACCGGAATTTCCAGGAAGAAATCGAGTTTCTTAATGCAATTTTCCCAAACGGAGCAGCATATTGTATGGGACGTATGAATTCTGACTGTTGGTACCTGTACACTTTGGATCTCCCAGAGAGCCGAGTAATCAATCAGCCAGATCAAACCCTGGAAATTCTGATGAGTGAGCTTGACCCAGCAGTTATGgaccagttctacatgaaagatggtgttactgcaaaggatgtcactcgtgagagtggaattcgtgacctgataccaggttctgtcattgatgccacactgttcaatccttgtggctactcaatgaatggaatgaaATCGGATGGAACATATTGGACTATTCACATCACTCCAGAACCAGAATTTTCTTATGTTAGCTTTGAAACAAACCTAAGTCAGACCTCCTATGACGACCTGATCAGGAAAGTTGTGGAAGTCTTCAAGCCAGGAAAATTTGTGACCACCTTGTTTGTTAATCAGAGTTCTAAGTGTCGCACAGTGCTTTCTTCGCCCCAGAAGATTGACGGTTTCAAACGTCTTGATTGCCAGAGCGCTATGTTCAACGATTACAATTTTGTTTTTACCAGTTTTGCTAAGAAACAGCAACAACAGAGTTGATTAGGAAAAATGAAAAAGAAAAAACGCAAAAAGAGAAGACACACAGGAGGTGGTGGCTGCTTTCTAGATGTTGATCCTGGGGGCCATGCTGACCGTGACCACCACCTTGTAGCTGCAGAAAGCCCTAGGTGTAATGATAGTGTAATCATTTTGAAGTGTATGCATTATTATATCAAGGAGTTAGATATCTTGCATGAATGCTCTCTTCTGTGTTTAGGTGTTCTATGCCACTCTTGCTGTGGAACTGAAGTGCATGTAGAAAAGAACTCTGACTGTATGAATCTTTACGACACTTGTGAAAACGATTCGACTTGGTTTATGCACAGCGTAATATTTCTGCAGGCATCGTCCAAAATCCCCCACAGACAAGGCTTTCGTCCCCATTAGATGCGGCCTCAGCTGACCATTGGCGACTGTTCTATTTGCTGCCAGAGTTTTTACATCCAGTTACCTCCACTTTCTAGAGCATATTCTCTACTAATGTTCAAAACCGATTTCTACTTCATACAGGTGTCTTATGCAATGGCAATTAAAGTTTTCTTCCACAAGTTGAGTCTTTGTAAGGAAATGATTCCAGTTGCTTGTTTTGTGTTCTACTGTTTTAGTAATTGCTCCTGCATTTATAGTCCTATGGTTTTTTCACTACCCCTGATGAAGCAATACACGGTCACACTGTGGGCTTACATTGTAATCTTCATCCCAGATGGGAGCTCAGAGACGGTCCCTTGCTCATTTTTCCCTAAGATGTAGAATGTGGCCTTGCTATTGGCATGCCCTTCTGTGGAAGATAAATGATGGAAGTGAAAGTATCCCGGGGGTGAGCAAGGAGAACCAACCCCATGGCAGTGATGGGCTGTGCAGTGCACTCCGAGCTCTCACAGTGGAGTGCCCACCATGCCTTCACTAACTCACTGAGCAGTGATAGGGATGCCCACCAAGTCAGAGCAGAAATCTAACCCTAAGGATTCTCACCTCGGTAAGTGCCGCCATTGCCACCACTTTACTAAAGGAAGTTTCCGCTCAGAGGAGAGTCTGTACTTCCCGCCTGTCCTAATGTCAGCTGTTCTCTCTGGTCTTTCACCATGGCGTTCAGATGCTCAAATGAACGGCTGATCGGCCGCAGGGAGGACTCTCCGGGTTACTGGGCCTGGAGAATGGAGAAACAGCACGGTATTCTGACAGTTAATGGCACCAGAGATGCGGGCTTTCAAGAGCTGGCCTGTTAGTGGCATTTTTAAGCAGAAAAGAGCAAACTAGACGAAGTTCCCTATTTATTGCCCTCCCACTGTTTCCTTGGCAGTTTCTGGACTGGCGCAATGATGCCTTGTTCCTTCCGTATTTATAACGAACGAAACACTTTTTTAGCGTTTCTAAGCATGGAGTCTACTTGGTTTGAAATCAAGTGGTTGGAACACTGTCTGGATTTTTACTTTACGCAGTGTTGATTGAACGCTTCGTTGGGGAAGCCTTCAGTCCGCTTCATCGGTCTGTTCTGTAATGAGCACAGCACACCTAGTTTGAATTGCTGTTTGGAGGGCCAGTGCTTATTTGAGCTGGGTCTTGTAACCCAGTAGATTTTGGCTTGAGGTCTGACTCCCCCATCTTACGAAATTAAGAATTCTAATGTTGGAAATTGCATAGGGTTTGCGTGGAAAAAAGCCCAGGaaaaaaaaaaaaaaaaaaCAGAAGGCGGACTAGTGATCTAGTGTGATTACAGGCGGGGAAGTTTTGGTGCCATAATTTCTTTGTTGGTGTTGGACTTTTAATCAGCTGAAATGTATTTCTGTACCACAATGTAAGCTTCAATAAAAGTTTGCTTAATTGTCTAGTAACATCCAGAAA