Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl5
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L5
Also known as -
Coordinate chr14:2860963-2867397
Strand -
Gene summary Enables 5S rRNA binding activity and mRNA binding activity. Involved in cellular response to inorganic substance; positive regulation of aminoacyl-tRNA ligase activity; and positive regulation of phosphatase activity. Located in cytosolic ribosome. Part of aminoacyl-tRNA synthetase multienzyme complex and cytosolic large ribosomal subunit. Is active in postsynaptic density. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 6; T-cell acute lymphoblastic leukemia; and glioblastoma. Orthologous to human RPL5 (ribosomal protein L5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl5

Retroname Coord Strand Genomic Region ENSG
Rpl5P2 chr7:16525991-16526928 + Intergenic
N/A UCSC
Rpl5P3 chr7:48878120-48878408 - Intragenic
N/A UCSC
Rpl5P4 chr7:6246710-6247585 + Intergenic
N/A UCSC
Rpl5P6 chr9:13614505-13614690 + Intergenic
N/A UCSC
Rpl5P8 chr10:112564200-112565174 - Intergenic
N/A UCSC
Rpl5P9 chr10:70330692-70331669 + Intragenic
N/A UCSC
Rpl5P10 chr11:45757980-45758974 + Intragenic
N/A UCSC
Rpl5P11 chr13:70577370-70577611 - Intragenic
N/A UCSC
Rpl5P12 chr15:96670501-96671395 + Intergenic
N/A UCSC
Rpl5P14 chr20:21266116-21266623 + Intergenic
N/A UCSC
Rpl5P15 chrX:51277635-51278378 + Intragenic
N/A UCSC
Rpl5P16 chrX:57715029-57715963 - Intergenic
N/A UCSC
Rpl5P1 chr5:111058861-111059684 - Intergenic
N/A UCSC
Rpl5P5 chr7:83989470-83989720 - Intergenic
N/A UCSC
Rpl5P7 chr9:73856303-73856918 + Intragenic
N/A UCSC
Rpl5P13 chr16:4702530-4703425 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031099.1
TCGCTTGCGTCCTGGAGGTGCTACATACTGCGCATGCGTACGCGACTCCGGTCTTTTTCCCCCTAGCGCGGCCGACTCTGCAGGTCTGCGTGGAGCCGCAGTTGCGGGTCTCTGTTCCGCAGGATGGGGTTCGTGAAAGTTGTCAAGAATAAGGCCTACTTTAAAAGATACCAAGTGAGATTTAGAAGGCGGCGAGAGGGTAAAACTGACTACTATGCACGGAAACGATTGGTGATCCAGGACAAAAATAAGTACAACACACCGAAATACAGGATGATAGTTCGTGTAACGAACAGAGACATCATCTGCCAGATTGCATATGCCCGTATAGAAGGGGATATGATCGTCTGTGCAGCATATGCACATGAACTTCCAAAATACGGTGTGAAAGTTGGCCTGACAAACTATGCTGCAGCCTATTGCACTGGCCTGCTGCTGGCCCGCAGGCTTCTGAATAGGTTTGGCATGGACAAGATCTATGAAGGCCAAGTGGAGGTGAATGGAGACGAGTACAATGTGGAAAGCATAGACGGTCAGCCTGGTGCCTTCACTTGCTATCTGGATGCGGGTCTTGCCCGAACTACAACTGGCAATAAAGTTTTTGGCGCCCTGAAGGGAGCTGTGGATGGAGGCTTATCTATCCCCCATAGTACCAAACGATTCCCTGGCTATGACTCTGAAAGCAAGGAGTTCAATGCAGAGGTGCACCGGAAGCACATCATGGGTCAGAATGTGGCAGACTACATGCGCTACCTGATGGAGGAGGATGAGGATGCGTATAAGAAACAGTTCTCTCAGTACATCAAGAACAACGTGACTCCAGACATGATGGAGGAGATGTATAAGAAAGCTCATGCTGCTATCCGAGAGAATCCAGTCTACGagaagaagcccaagagagaagtgaagaagaagaGGTGGAATCGTCCCAAAATGTCTCTTGCCCAGAAGAAAGACCGGGTTGCTCAAAAGAAGGCAAGCTTCCTCAGAGCTCAGGAACGGGCTGCTGAAAGCTAAAGCCATTTTCTATGAAGATTTTTTCATAAAGACAATAAACATTGATCAAAGC
>XM_006250585.3
GCTACATACTGCGCATGCGTACGCGACTCCGGTCTTTTTCCCCCTAGCGCGGCCGACTCTGCAGGTCTGCGTGGAGCCGCAGTTGCGGGTCTCTGTTCCGCAGGATGGGGTTCGTGAAAGTTGTCAAGAATAAGGCCTACTTTAAAAGATACCAAGTGAGATTTAGAAGGCGGCGAGAGGGTAAAACTGACTACTATGCACGGAAACGATTGGTGATCCAGGACAAAAATAAGTACAACACACCGAAATACAGGATGATAGTTCGTGTAACGAACAGAGACATCATCTGCCAGATTGCATATGCCCGTATAGAAGGGGATATGATCGTCTGTGCAGCATATGCACATGAACTTCCAAAATACGGTGTGAAAGTTGGCCTGACAAACTATGCTGCAGCCTATTGCACTGGCCTGCTGCTGGCCCGCAGGCTTCTGAATAGGTTTGGCATGGACAAGATCTATGAAGGCCAAGTGGAGGTGAATGGAGACGAGTACAATGTGGAAAGCATAGACGGTCAGCCTGGTGCCTTCACTTGCTATCTGGATGCGGGTCTTGCCCGAACTACAACTGGCAATAAAGTTTTTGGCGCCCTGAAGGGAGCTGTGGATGGAGGCTTATCTATCCCCCATAGTACCAAACGATTCCCTGGCTATGACTCTGAAAGCAAGGAGTTCAATGCAGAGGTGCACCGGAAGCACATCATGGGTCAGAATGTGGCAGACTACATGCGCTACCTGATGGAGGAGGATGAGGATGCGTATAAGAAACAGTTCTCTCAGTACATCAAGAACAACGTGACTCCAGACATGGAGGAGATGTATAAGAAAGCTCATGCTGCTATCCGAGAGAATCCAGTCTACGagaagaagcccaagagagaagtgaagaagaagaGGTGGAATCGTCCCAAAATGTCTCTTGCCCAGAAGAAAGACCGGGTTGCTCAAAAGAAGGCAAGCTTCCTCAGAGCTCAGGAACGGGCTGCTGAAAGCTAAAGCCATTTTCTATGAAGATTTTTTCATAAAGACAATAAACATTGATCAAAGCAG