Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl18
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L18
Also known as -
Coordinate chr1:101700910-101703551
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in liver regeneration. Part of cytosolic large ribosomal subunit. Is active in synapse. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 18. Orthologous to human RPL18 (ribosomal protein L18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl18

Retroname Coord Strand Genomic Region ENSG
Rpl18P1 chr1:198177367-198177847 + Intragenic
N/A UCSC
Rpl18P2 chr3:141196044-141196581 - Intergenic
N/A UCSC
Rpl18P3 chr3:164327074-164327653 + Intergenic
N/A UCSC
Rpl18P4 chr3:68923247-68923835 - Intergenic
N/A UCSC
Rpl18P5 chr5:135813944-135814548 + Intragenic
N/A UCSC
Rpl18P6 chr7:135815317-135815922 - Intragenic
N/A UCSC
Rpl18P7 chr10:45827923-45828336 + Intergenic
N/A UCSC
Rpl18P8 chr12:7133736-7134333 + Intergenic
N/A UCSC
Rpl18P9 chr14:82244138-82244339 - Intragenic
N/A UCSC
Rpl18P10 chr14:85928123-85928598 - Intragenic
N/A UCSC
Rpl18P11 chr16:32917110-32917622 + Intergenic
N/A UCSC
Rpl18P12 chr18:23938818-23939371 + Intragenic
N/A UCSC
Rpl18P13 chr18:62151751-62152369 + Intergenic
N/A UCSC
Rpl18P14 chrX:105838023-105838650 + Intergenic
N/A UCSC
Rpl18P15 chrX:109895409-109895877 + Intergenic
N/A UCSC
Rpl18P16 chrX:140541769-140541922 - Intergenic
N/A UCSC
Rpl18P17 chrX:20947511-20948026 + Intragenic
N/A UCSC
Rpl18P18 chrX:7891671-7891849 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031102.2
GCAGGAGGCGCCATCATGGGTGTTGACATTCGCCACAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGCCAGGATATCTACCTGCGGCTGCTAGTCAAGCTGTACAGGTTTCTGGCCAGACGGACCAACTCCACCTTCAACCAGGTTGTGCTGAAAAGGTTATTTATGAGCCGAACTAACCGGCCACCTCTGTCCCTGTCCCGAATGATCCGGAAGATGAAGCTTCCTGGTCGGGAGAACAAAACTGCTGTGGTTGTGGGGACGATCACAGATGATGTGCGGATTCTGGAAGTGCCCAAGCTGAAGGTGTGTGCACTGAGGGTGAGCAGCCGGGCCCGAAGTCGGATCCTCAAGGCTGGGGGTAAGATCCTGACCTTCGACCAGCTGGCCCTGGAGTCTCCCAAGGGCAGGGGCACTGTGCTCTTGTCTGGTCCTCGGAAGGGCCGAGAGGTGTACCGACACTTTGGCAAGGCCCCAGGAACTCCACACAGCCACACCAAACCCTATGTCCGTTCCAAGGGCCGGAAGTTCGAGCGTGCCAGAGGCCGAAGGGCCAGCCGAGGCTACAAAAACTAACCCTGGCTCTTACTGTTAATAAAAAAGCTTTGGATGTTGA