Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Elob
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name elongin B
Also known as Tceb2
Coordinate chr10:13163032-13168217
Strand -
Gene summary Enables transcription coactivator activity. Involved in positive regulation of transcription by RNA polymerase II. Part of VCB complex and transcription regulator complex. Orthologous to human ELOB (elongin B). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Elob

Retroname Coord Strand Genomic Region ENSG
Tceb2P2 chr1:77577127-77577463 + Intergenic
N/A UCSC
Tceb2P3 chr3:21505211-21505646 + Intergenic
N/A UCSC
Tceb2P4 chr4:126305284-126305718 - Intergenic
N/A UCSC
Tceb2P5 chr4:9727384-9727796 + Intragenic
N/A UCSC
Tceb2P6 chr6:79498165-79498340 + Intergenic
N/A UCSC
Tceb2P9 chr10:76274647-76274855 - Intergenic
N/A UCSC
Tceb2P12 chr16:54415472-54415908 - Intragenic
N/A UCSC
Tceb2P13 chr17:58568017-58568445 + Intragenic
N/A UCSC
Tceb2P1 chr1:103040992-103041356 + Intergenic
N/A UCSC
Tceb2P7 chr8:119285621-119286084 + Intergenic
N/A UCSC
Tceb2P8 chr8:3271892-3272354 - Intergenic
N/A UCSC
Tceb2P10 chr11:74189311-74189693 - Intergenic
N/A UCSC
Tceb2P11 chr16:41004001-41004323 - Intergenic
N/A UCSC
Tceb2P14 chrX:123309730-123310179 + Intergenic
N/A UCSC
Tceb2P15 chrY:1189615-1189906 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_031129.3
GCGGCCGCGCCGGCGCGTCGAGCCAGAAGCAGCCGCCGGGATGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACGGTGTTCGAACTGAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTGTACAAGGACGACCAGCTCCTTGATGATGGAAAAACTCTGGGCGAATGTGGCTTCACCAGTCAGACAGCAAGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTTCGAGCAGATGACACCTTTGAAGCGCTGCGTATTGAACCCTTCTCCAGCCCTCCGGAGCTTCCAGATGTGATGAAGCCACAGGATTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGAGGGCCCCAGGCCTACCCCCTAGAAACCCATTCCCCCAATAAAAAAAAGATTTGGCTG
>XM_008767596.1
ccacgccgggggccgcgggcTAACGCTGACGCGGGCTCGCCGTCCTCAGGACGTGTTTCTCATGATCCGGCGCCACAAGACCACCATCTTTACGGACGCCAAGGAGTCGAGCACGGTGTTCGAACTGAAGCGCATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGAGCAGCGGCTGTACAAGGACGACCAGCTCCTTGATGATGGAAAAACTCTGGGCGAATGTGGCTTCACCAGTCAGACAGCAAGGCCACAGGCCCCAGCCACAGTGGGCCTGGCCTTTCGAGCAGATGACACCTTTGAAGCGCTGCGTATTGAACCCTTCTCCAGCCCTCCGGAGCTTCCAGATGTGATGAAGCCACAGGATTCTGGAGGCAGTGCCAATGAACAAGCTGTGCAGTGAGGGCCCCAGGCCTACCCCCTAGAAACCCATTCCCCCAATAAAAAAAAGATTTGGCTGTCTA