Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Actb
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name actin, beta
Also known as Actx
Coordinate chr12:13715843-13718813
Strand +
Gene summary Enables protein kinase binding activity. Involved in several processes, including cellular response to electrical stimulus; regulation of cyclin-dependent protein serine/threonine kinase activity; and regulation of norepinephrine uptake. Located in several cellular components, including actin cytoskeleton; membrane raft; and postsynaptic density. Part of protein-containing complex. Used to study non-alcoholic fatty liver disease. Biomarker of temporal lobe epilepsy. Human ortholog(s) of this gene implicated in Baraitser-Winter syndrome. Orthologous to human ACTB (actin beta). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Actb

Retroname Coord Strand Genomic Region ENSG
ActbP1 chr5:125373714-125374247 - Intergenic
N/A UCSC
ActbP2 chr17:13873759-13874041 - Intergenic
N/A UCSC
ActbP3 chrX:117762409-117763366 + Intergenic
N/A UCSC
ActbP4 chrX:125453332-125453652 - Intergenic
N/A UCSC
ActbP5 chrX:2509440-2510681 - Intragenic
N/A UCSC
ActbP6 chrX:38952840-38953552 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031144.3
GTCGAGTCCGCGTCCACCCGCGAGTACAACCTTCTTGCAGCTCCTCCGTCGCCGGTCCACACCCGCCACCAGTTCGCCATGGATGACGATATCGCTGCGCTCGTCGTCGACAACGGCTCCGGCATGTGCAAGGCCGGCTTCGCGGGCGACGATGCTCCCCGGGCCGTCTTCCCCTCCATCGTGGGCCGCCCTAGGCACCAGGGTGTGATGGTGGGTATGGGTCAGAAGGACTCCTACGTGGGCGACGAGGCCCAGAGCAAGAGAGGCATCCTGACCCTGAAGTACCCCATTGAACACGGCATTGTCACCAACTGGGACGATATGGAGAAGATTTGGCACCACACTTTCTACAATGAGCTGCGTGTGGCCCCTGAGGAGCACCCTGTGCTGCTCACCGAGGCCCCTCTGAACCCTAAGGCCAACCGTGAAAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTAGCCATCCAGGCTGTGTTGTCCCTGTATGCCTCTGGTCGTACCACTGGCATTGTGATGGACTCCGGAGACGGGGTCACCCACACTGTGCCCATCTATGAGGGTTACGCGCTCCCTCATGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGACTACCTCATGAAGATCCTGACCGAGCGTGGCTACAGCTTCACCACCACAGCTGAGAGGGAAATCGTGCGTGACATTAAAGAGAAGCTGTGCTATGTTGCCCTAGACTTCGAGCAAGAGATGGCCACTGCCGCATCCTCTTCCTCCCTGGAGAAGAGCTATGAGCTGCCTGACGGTCAGGTCATCACTATCGGCAATGAGCGGTTCCGATGCCCCGAGGCTCTCTTCCAGCCTTCCTTCCTGGGTATGGAATCCTGTGGCATCCATGAAACTACATTCAATTCCATCATGAAGTGTGACGTTGACATCCGTAAAGACCTCTATGCCAACACAGTGCTGTCTGGTGGCACCACCATGTACCCAGGCATTGCTGACAGGATGCAGAAGGAGATTACTGCCCTGGCTCCTAGCACCATGAAGATCAAGATCATTGCTCCTCCTGAGCGCAAGTACTCTGTGTGGATTGGTGGCTCTATCCTGGCCTCACTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTACGATGAGTCCGGCCCCTCCATCGTGCACCGCAAATGCTTCTAGGCGGACTGTTACTGAGCTGCGTTTTACACCCTTTCTTTGACAAAACCTAACTTGCGCA