Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Vdac1
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name voltage-dependent anion channel 1
Also known as -
Coordinate chr10:37724915-37752827
Strand +
Gene summary Enables voltage-gated anion channel activity. Involved in mitochondrial calcium ion transmembrane transport. Located in mitochondrial outer membrane and synaptic vesicle. Part of protein-containing complex. Used to study visual epilepsy. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human VDAC1 (voltage dependent anion channel 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Vdac1

Retroname Coord Strand Genomic Region ENSG
Vdac1P1 chr2:15041616-15043348 + Intergenic
N/A UCSC
Vdac1P2 chr2:173434988-173436927 + Intergenic
N/A UCSC
Vdac1P3 chr2:176680261-176682018 - Intergenic
N/A UCSC
Vdac1P4 chr2:264616304-264618187 + Intergenic
N/A UCSC
Vdac1P5 chr5:108982792-108983774 - Intergenic
N/A UCSC
Vdac1P6 chr11:2979660-2981094 + Intergenic
N/A UCSC
Vdac1P7 chr11:3511740-3513174 + Intergenic
N/A UCSC
Vdac1P8 chr13:4051237-4053086 - Intergenic
N/A UCSC
Vdac1P9 chr15:77976067-77976878 - Intergenic
N/A UCSC
Vdac1P10 chr16:58592235-58593493 - Intergenic
N/A UCSC
Vdac1P11 chr17:69604669-69606342 - Intergenic
N/A UCSC
Vdac1P12 chr18:22189657-22190794 + Intergenic
N/A UCSC
Vdac1P13 chr18:51612309-51614104 - Intergenic
N/A UCSC
Vdac1P14 chr19:29863316-29863641 - Intragenic
N/A UCSC
Vdac1P15 chrX:144408285-144409994 - Intragenic
N/A UCSC
Vdac1P16 chrX:155629293-155631055 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031353.1
CCCAGCCTCCTCGCCGCAACCCCCGCCGTAGCTGCCGCTGCTCTCGCCGTCACCGCCTCCGAGAACATGGCTGTGCCTCCCACATATGCTGATCTTGGCAAGTCCGCCAGGGATGTCTTCACCAAGGGCTACGGCTTTGGCTTAATAAAACTTGATTTGAAAACGAAGTCCGAGAATGGATTGGAATTTACTAGCTCAGGTTCTGCCAACACGGAGACCACCAAAGTGAACGGCAGTCTGGAAACCAAGTACAGATGGACCGAGTATGGGCTGACGTTTACTGAGAAGTGGAACACAGACAACACCCTGGGCACTGAGATCACCGTGGAAGACCAGCTTGCTCGTGGACTGAAGCTGACCTTTGATTCATCTTTCTCGCCTAACACTGGGAAAAAAAATGCTAAAATCAAGACAGGGTACAAGAGGGAGCATATCAACCTGGGCTGTGATGTGGACTTTGACATCGCTGGGCCCTCAATCCGGGGCGCTCTGGTGCTTGGCTATGAGGGTTGGCTGGCTGGCTACCAGATGAATTTTGAGACCTCGAAGTCCCGAGTGACCCAGAGCAACTTTGCAGTTGGCTACAAGACGGACGAATTCCAGCTTCATACTAATGTGAATGATGGGACGGAGTTTGGTGGCTCCATTTACCAGAAGGTGAACAAGAAGTTGGAGACTGCTGTCAATCTCGCCTGGACCGCAGGAAACAGTAACACTCGCTTTGGAATAGCAGCCAAGTATCAGGTCGACCCTGATGCCTGCTTTTCGGCCAAAGTGAACAACTCCAGTCTAATTGGCTTAGGGTACACTCAGACCCTAAAACCAGGTATCAAACTGACACTGTCAGCCCTGCTGGATGGCAAGAACGTCAATGCGGGTGGCCACAAGCTTGGTTTAGGACTGGAATTTCAAGCATAAATGAATATTGTACAATCGTTAATTTTAAACTATTTTGCAGCATAGCTACCTTCAGAGTTTAGTGTACCTTTTAATGTCATATGTTGGGGATGCGAGAGTTGATTGATACCACGTTAGACCTCCAGGCTAAGGATGACTCGGCTTTAAGGTGTTTACCGTTTCAGAGGTACAGCGGAAACCCCATTCCAGGAAGGGTCCTTTTTAGCTGTAGGCGTGGGCTGGGGAGGAGCTCCTCTAGAGATGCCAGGCTGCAAGTGGAAGCTGGGAACGTGTGGACCCTTTGTAAATCTGTATCCAGTCCGCACATGAAATTGTGACTTCCTGAACATCGAACCCCGGTGTCCCGATCCTGTCTGCTCGGAAGCATGTACACACCTACGTGAAAGGGACGGTTTTTTTTTTTTTTTATCGGATGGTCACGCCCTGTTCCCATCGTGCCCTGTTCCCATCCTAGCCCATCAGTTACCTGTTTTACACCAAAAGTAGTCTTTAGGGTGTAGTTAGCAATTTCTTTTGTGCCATTTTAGGGTGGAGAGGGTGGGCATGATGAAGCCAGTCATTCAGGACTTAATTCTTCCTTGTGTTGTGGTGTGGTTTTCTTCCTTTCTTCTGTTTTTTTTTTTTAATTCCTTTTTTTTTGCCATTGCACCAGAGTATGAAATAGCTTCCAGGTTCTCCGGCTCAGAGCTGGGCGGGTGATTGTGGTCACACCCTGACAACACTAGGGATCTCAACGGACTCCTCTTGTAGCCGCACCACTATTTTTAGCAGTTTAATGGGTACATTATAGAGTCTTCCATTTTGTGTGGAATTAGCTCCTCCCCTTCAAATGCTGTAATTAACATCACTTAAAATAAAACTTGAATAAAATACTGAAACCTCA