Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Casp6
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name caspase 6
Also known as Mch2
Coordinate chr2:235341326-235353715
Strand +
Gene summary Enables endopeptidase activity. Involved in several processes, including acute inflammatory response to non-antigenic stimulus; axonal fasciculation; and positive regulation of programmed cell death. Located in several cellular components, including axon; cytosol; and neuronal cell body. Used to study status epilepticus. Biomarker of brain ischemia; endometritis; middle cerebral artery infarction; and prostate carcinoma. Human ortholog(s) of this gene implicated in ovarian carcinoma. Orthologous to human CASP6 (caspase 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Casp6

Retroname Coord Strand Genomic Region ENSG
Casp6P1 chr2:32364808-32365466 - Intergenic
 N/A UCSC
Casp6P2 chr4:152349375-152349792 + Intragenic
 N/A UCSC
Casp6P3 chr11:68099160-68100458 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001271984.1
CCTGGAGAGCGGAGGCCTCAGGACGAGCGCGGACACCCGGAGCTCGTGGGCAGGGGAAAGTAAAACATGACGGAGACAGATGGCTTCTACAGAAGTAGGGAAGTGTTGGATCCAGCCGAGCAGTACAAGATGGACCACAAGAGGAGAGGAACTGCCCTAATCTTCAATCACGAGAGGTTCTTCTGGCACCTAGCACTCCCAGAGAGGCGGGGCACCAACGCAGACAGGGACAACCTGACTCGAAGGTTCTCAGAGCTAGGATTTGAAGTGAAATGCTTTAACGACCTCCGGGCAGAAGAACTACTGCTCAAGATTCACGAGGTGTCGACTTCCAGCCACGTAGATGCCGATTGCTTCCTGTGTGTCTTCCTGAGCCACGGGGAAGGCAACCACATTTACGCATACGATGCCAAAATTGAAATTCAGACCTTGACTGGCTTGTTCAAAGGAGACAAGTGTCAGAGCCTGGTTGGAAAACCCAAGATATTCATCATCCAGGCCTGTCGGGGCAGCCAGCATGACGTGCCCGTGGTTCCTCTGGACGTGGTGGATCATCAGACAGACAAGCTGGACGACAACGTGACCCAGGTGGATGCTGCCTCGGTGTACACTCTGCCTGCGGGGGCGGACTTCCTCATGTGTTACTCTGTTGCAGAAGGGTATTACTCTCACCGAGAGACTGTGAACGGCTCCTGGTACATTCAGGATTTGTGCGAGATGCTGGCCAGGCACGGTAGTTCCCTGGAGTTCACCGAGCTGCTCACGCTGGTGAACAGGAAGGTCTCTCAGCGCCGTGTGGATTTCTGCAAAGACCCAGGTGCAATTGGCAAGAAGCAGGTTCCCTGCTTTGCCTCAATGCTGACCAAAAAGCTGCATTTCTGTCCCAAACCTAGTAAGTAGGGCCGTCCGACTTGCTACAAATGTTTCACACACATTTCCCTTCTACACAGAGGCCAGCTGGCCAAAGACTCCGCCCACCAACGGACACTGTTTGAATTTTTAAGGTGCTACAGAAAAGTAATGTTTTGCCTTTGTTATTATTTTCCAATCATGTTGGGGATGGGGAAAGGGCTAAAGAAATCCTCAGGAAATTACTGTGCGCAAATGCCCAATACATTTATTATGTTTCTGGTAAATGGCAAGATTACTAAGAATACCAACTACTTTGCCTTACCTTTTGTGACACTATTTATATAGGCTCATTGTATAATGTTTTTAAAGATCTTTGAAACTCAAGAATGAGATCGTTTTCACCTAATAAAAATGTCTAAAACTCACTAACATTTTCTAATTCATATGCTTACATAATGTACAGTGGGCCTGTTTTAGTCGGTCATGCTTTCATTTATTATTTTGTTTACCTGTAATGGGGCATTTTATGTGTGGCTTTAATTCCCATTTTGGAAACAATAAACCTTTCAGAACTA