Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fdps
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name farnesyl diphosphate synthase
Also known as Ac2-125|FPS
Coordinate chr2:188403595-188413219
Strand -
Gene summary Enables geranyltranstransferase activity. Involved in several processes, including farnesyl diphosphate biosynthetic process; positive regulation of cell growth involved in cardiac muscle cell development; and positive regulation of cholesterol biosynthetic process. Located in mitochondrial matrix and peroxisome. Human ortholog(s) of this gene implicated in porokeratosis. Orthologous to human FDPS (farnesyl diphosphate synthase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fdps

Retroname Coord Strand Genomic Region ENSG
FdpsP1 chr2:184459569-184460717 - Intergenic
N/A UCSC
FdpsP2 chr2:193722603-193723117 - Intragenic
N/A UCSC
FdpsP3 chr5:134542232-134543382 - Intergenic
N/A UCSC
FdpsP4 chr15:19705998-19706579 + Intragenic
N/A UCSC
FdpsP5 chr16:6788724-6789612 + Intragenic
N/A UCSC
FdpsP6 chr18:55017537-55017750 - Intergenic
N/A UCSC
FdpsP7 chrX:18177329-18178489 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031840.1
TTATATTTGGGTTCTGCCTACTGAGCCGGGAGTCTGGGAACTACAACTCCCAGAGTGCTGAGCGGATGCACGCTCTGCTTTTAGGTGTAAGCCGCAAACATCTTGGACCCCGGGAGAATCCGCGTTGAAGCACAGAGCATTTAGCTCCTCTGTCAGAATGAATGGGGACCAGAAACTGGATGTTCATAACCAAGAAAAGCAGAATTTCATCCAGCACTTCTCCCAGATTGTCAAGGTGCTGACTGAGGATGAACTGGGACACCCAGAGAAGGGAGATGCTATTACCCGGATCAAAGAGGTCCTGGAGTACAACACTGTAGGAGGCAAGTACAATCGGGGTCTGACGGTGGTACAGACCTTCCAGGAACTGGTGGAACCAAGGAAACAGGATGCTGAGAGCCTACAGCGGGCCCTGACGGTGGGCTGGTGTGTAGAACTGCTCCAGGCTTTCTTCCTCGTGTTAGATGACATCATGGACTCTTCCCACACTCGCCGGGGGCAGATCTGCTGGTATCAGAAGCCGGGCATAGGCTTGGATGCCATCAACGATGCTCTGCTTCTGGAAGCCGCTATCTACCGCCTGCTTAAGTTCTACTGCAGGGAGCAGCCCTACTACCTCAACCTGCTGGAGCTCTTTCTACAGAGTTCCTATCAGACTGAGATCGGGCAGACTCTCGACCTCATCACAGCACCCCAGGGCCAAGTGGATCTTGGTAGATACACTGAAAAGAGGTACAAATCTATCGTCAAGTACAAGACAGCTTTCTACTCTTTCTACCTGCCTATCGCGGCTGCCATGTACATGGCTGGAATTGATGGGGAGAAGGAACACGCTAATGCCCTGAAGATCCTGCTGGAGATGGGCGAGTTCTTCCAGATCCAGGACGACTACCTTGATCTCTTTGGAGACCCCAGTGTGACCGGAAAGGTCGGCACTGACATCCAGGACAACAAATGCAGCTGGCTGGTGGTTCAGTGTCTGCTACGAGCCACTCCTCAGCAGCGCCAGATCTTAGAGGAGAATTATGGGCAGAAGGACCCAGAAAAAGTGGCGCGGGTGAAAGCACTGTACGAGGAGCTGGATCTGCGGAGTGTGTTCTTCAAGTACGAGGAAGACAGTTACAACCGCCTCAAGAGTCTCATAGAGCAGTGCTCCGCGCCCCTGCCCCCATCCATCTTCCTGGAACTAGCAAACAAGATCTACAAGCGGAGAAAGTAACCTCGAATTGTAGAGGCTGCGAGGGAGGGGTCTCAATAAATTATTGTTCAAC