Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Advanced Search

Summary

Gene Name Kars
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name lysyl-tRNA synthetase
Also known as D8Ertd698e|D8Wsu108e|Kars1|LysRS|mKIAA0070
Coordinate chr8:112720071-112737986
Strand -
Gene summary Enables scaffold protein binding activity. Predicted to be involved in several processes, including ERK1 and ERK2 cascade; diadenosine tetraphosphate biosynthetic process; and lysyl-tRNA aminoacylation. Predicted to act upstream of or within translation. Located in mitochondrion. Part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alimentary system; central nervous system; cranium; genitourinary system; and sensory organ. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease recessive intermediate B and autosomal recessive nonsyndromic deafness 89. Orthologous to human KARS1 (lysyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Kars

Retroname Coord Strand Genomic Region ENSG
KarsP2 chr8:62272938-62274359 - Intragenic
 ENSMUSG00000110131 UCSC
KarsP1 chr6:8377446-8379399 - Intragenic
 ENSMUSG00000089735 UCSC
KarsP4 chrX:75014946-75016797 - Intergenic
 ENSMUSG00000081106 UCSC
KarsP3 chrX:146891555-146893446 + Intragenic
 ENSMUSG00000094643 UCSC

Expression

Transcript Sequences

>NM_001363430.1
GAGGCAGGACTTAGAGCCACGACCTGGAAGTTCTAGTTCTACGCtagtcataatttttttttttctgggtcggGCCAGTGGGGAAGATGGCCACGCTGCAGGAGAGTGAAGTCAAAGTGGATGGCGAGCAGAAACTAAGCAAGAAgctccctggttggtTGTCCTTTGTGTGAGCAGTTTAGTGGATTCCTTAGCGGAGGATGGGACTAAGAACATTGCAGATGTTAGTCAGGAGGGACTGAAGTTCAGAGGGACATTGCACGTGGTGGTAATCAGTAGTTCCAGGGTGTTCCGCCATGTTGATGCAAGCTGCTGTCAGGCTTGTTAGGGGGGCCCTGCGCCAAACCTCATGGGCAGAATGGGGTCAGAGGGAACTTCGACTGGGCCACCTTGCTCCTTTCACAACGCTCCACAAGGACCAGCCACTTTCTGATAGAAGAAGTGAGCTGAAGAGGCGTCTGAAAGCTGAGAAGAAACTGGCAGAGAAGGAGGCCAAGCAGAAAGAGCTGAGTGAGAAACAGCTAAACCAGACTGCTTCCGCTCCCAACCACACGGCTGACAATGGCGTGGGTGCTGAGGAGGAGACTCTGGACCCAAATcaATACTACAAGATCCGAAGTCAAGCCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGTACCCACACAAGTTCCACGTGGACATCTCACTCACTCAGTTCATCCAAGAATATAGTCACCTGCAGCCTGGGGACCACCTGACTGATGTCACCCTCAAAGTGGCAGGCCGCATCCACGCCAAGAGGGCCTCTGGAGGGAAGCTCATCTTCTATGACCTGCGAGGAGAGGGGGTCAAGTTACAAGTCATGGCCAACTCCAgGAATTACAAATCAGAGGAGGAATTTGTTCATATCAATAACAAACTGCGCCGGGGAGACATAATTGGAGTTGAGGGCAATCCCGGGAAAACCAAGAAGGGCGAGCTGAGCATCATCCCCCAGGAGATCACGCTGCTGTCCCCCTGCTTGCACATGCTGCCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACACGGTATCGTCAAAGATACTTGGACTTGATCCTGAACGACTTTGTGAGGCAGAAATTTATCGTCCGCTCTAAGATCATCACATACATAAGAAGTTTCTTGGATGAGCTGGGCTTCCTAGAGATCGAAACTCCCATGATGAACATCATTCCCGGGGGAGCTGTGGCCAAGCCTTTCATCACCTATCACAATGAGCTGGACATGAACTTGTATATGAGAATTGCTCCAGAACTCTACCACAAGATGCTGGTGGTTGGTGGCATTGACCGGGTTTATGAAATTGGGCGCCAGTTCCGGAACGAAGGGATTGATTTGACTCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTATCATGACCTCATGGAGATCACAGAGAAGATGCTGTCAGGGATGGTGAAGAGCATTACAGGCAGTTACAAGATCACCTACCACCCAGATGGGCCGGAAGGCCAAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAAGAATCAGCATGGTAGAAGAGCTTGAGAAAGCCCTAGGTGTGAAGCTGCCAGAAACCAGTCTCTTTGAAACTGAAGAAACTCGGAAAATTCTTGATGATATTTGTGTTGCAAAAGCTGTTGAATGCCCCCCACCTCGGACCACAGCCAGGCTCCTTGATAAGCTCGTTGGCGAGTTCCTCGAAGTCACATGCATCAGCCCTACCTTCATCTGTGATCACCCACAGATCATGAGTCCTTTGGCCAAATGGCACCGCTCCAAAGAGGGTCTCACGGAGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATATGCAATGCCTATACTGAGCTGAATGACCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCAGGCcaagGCCAAGGCTGCCGGTGATGACGAGGCCATGTTCATAGACGAGAACTTCTGTACTGCCCTGGAATACGGGCTGCCTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGCTCACCATGTTTCTCACCGATTCCAACAATATCAAGgAAGTACTTCTGTTTCCTGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGCGACCACTGAAACCCCAGAGAGCACAGAGGCCAGCCCCTCTGTCTAGAAGGCACATGCAACTATGGTGTCTGCATCTCAGCAGATCTGGTCTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCTTTTTATTCCTCGTTACCAAATAAATCATTTCTCTCTTTACCCA
>NM_053092.3
GAGGCAGGACTTAGAGCCACGACCTGGAAGTTCTAGTTCTACGCtagtcataatttttttttttctgggtcggGCCAGTGGGGAAGATGGCCACGCTGCAGGAGAGTGAAGTCAAAGTGGATGGCGAGCAGAAACTAAGCAAGAATGAGCTGAAGAGGCGTCTGAAAGCTGAGAAGAAACTGGCAGAGAAGGAGGCCAAGCAGAAAGAGCTGAGTGAGAAACAGCTAAACCAGACTGCTTCCGCTCCCAACCACACGGCTGACAATGGCGTGGGTGCTGAGGAGGAGACTCTGGACCCAAATcaATACTACAAGATCCGAAGTCAAGCCGTCCAGCAGCTGAAGGTCACTGGGGAGGATCCGTACCCACACAAGTTCCACGTGGACATCTCACTCACTCAGTTCATCCAAGAATATAGTCACCTGCAGCCTGGGGACCACCTGACTGATGTCACCCTCAAAGTGGCAGGCCGCATCCACGCCAAGAGGGCCTCTGGAGGGAAGCTCATCTTCTATGACCTGCGAGGAGAGGGGGTCAAGTTACAAGTCATGGCCAACTCCAgGAATTACAAATCAGAGGAGGAATTTGTTCATATCAATAACAAACTGCGCCGGGGAGACATAATTGGAGTTGAGGGCAATCCCGGGAAAACCAAGAAGGGCGAGCTGAGCATCATCCCCCAGGAGATCACGCTGCTGTCCCCCTGCTTGCACATGCTGCCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACACGGTATCGTCAAAGATACTTGGACTTGATCCTGAACGACTTTGTGAGGCAGAAATTTATCGTCCGCTCTAAGATCATCACATACATAAGAAGTTTCTTGGATGAGCTGGGCTTCCTAGAGATCGAAACTCCCATGATGAACATCATTCCCGGGGGAGCTGTGGCCAAGCCTTTCATCACCTATCACAATGAGCTGGACATGAACTTGTATATGAGAATTGCTCCAGAACTCTACCACAAGATGCTGGTGGTTGGTGGCATTGACCGGGTTTATGAAATTGGGCGCCAGTTCCGGAACGAAGGGATTGATTTGACTCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTATCATGACCTCATGGAGATCACAGAGAAGATGCTGTCAGGGATGGTGAAGAGCATTACAGGCAGTTACAAGATCACCTACCACCCAGATGGGCCGGAAGGCCAAGCCTACGAGGTCGACTTCACCCCACCCTTCCGAAGAATCAGCATGGTAGAAGAGCTTGAGAAAGCCCTAGGTGTGAAGCTGCCAGAAACCAGTCTCTTTGAAACTGAAGAAACTCGGAAAATTCTTGATGATATTTGTGTTGCAAAAGCTGTTGAATGCCCCCCACCTCGGACCACAGCCAGGCTCCTTGATAAGCTCGTTGGCGAGTTCCTCGAAGTCACATGCATCAGCCCTACCTTCATCTGTGATCACCCACAGATCATGAGTCCTTTGGCCAAATGGCACCGCTCCAAAGAGGGTCTCACGGAGCGCTTTGAGCTGTTTGTCATGAAGAAGGAGATATGCAATGCCTATACTGAGCTGAATGACCCCGTGCGGCAGAGGCAGCTGTTTGAGGAGCAGGCcaagGCCAAGGCTGCCGGTGATGACGAGGCCATGTTCATAGACGAGAACTTCTGTACTGCCCTGGAATACGGGCTGCCTCCCACAGCGGGCTGGGGCATGGGCATTGATCGGCTCACCATGTTTCTCACCGATTCCAACAATATCAAGgAAGTACTTCTGTTTCCTGCCATGAAGCCAGAGGACAAGAAGGAAACTGCAGCGACCACTGAAACCCCAGAGAGCACAGAGGCCAGCCCCTCTGTCTAGAAGGCACATGCAACTATGGTGTCTGCATCTCAGCAGATCTGGTCTGAGGGAGCGATTCCTGTGTGGCGCCGTCCATCTGGCCACTGCAGTCCAACCTCCACAAGAGAGAAGAACTAAAGAAGTTCTTTTTATTCCTCGTTACCAAATAAATCATTTCTCTCTTTACCCA