Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ddx39a
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name DExD-box helicase 39A
Also known as Ddx39|Ddxl
Coordinate chr19:24846530-24854886
Strand +
Gene summary Predicted to enable RNA binding activity; RNA helicase activity; and identical protein binding activity. Predicted to be involved in mRNA export from nucleus and mRNA splicing, via spliceosome. Predicted to be located in nuclear speck. Predicted to colocalize with cytoplasm. Orthologous to human DDX39A (DExD-box helicase 39A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx39a

Retroname Coord Strand Genomic Region ENSG
Ddx39aP1 chr17:85173660-85174312 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_053563.2
GTGTCATGGCGGCTCTCGGAGGCCCGCATGTGTACTGTGGTGGGTTTGAGGCACGGGGCGGCTCCAGGCTGCGTTTTCGGTCGCGGGGAGAGGACCCAGGCTTTCTGGGCAGATGCCCCGAGTCTGCACTCACCTGCTTCCCGTCTTGCTCCGCCGCTCTCCCAGGAGATTCACCTCCAGACTCCGAAGCGGAAAGCCGGTGTGGCGGCCCTTAGGCCATTCACCGGGTGTCGTTTTCCCGGTGTGAGGCCGGTTCAGCCAGTTGCATCTCGTCTTCCTGGGCCTGTTTGAAACTTTAGTGACATGGCAGAACAGGATGTGGAAAATGAGCTTTTGGATTATGATGAAGATGAAGAGCCCCAGGTACCCCAGGAGAGCACTCCAGCTCCCCCGAAGAAAGATGTCAAAGGATCTTATGTCTCCATCCACAGTTCTGGCTTCCGGGACTTTCTGCTGAAGCCGGAGCTCCTGAGAGCTATAGTTGACTGTGGCTTTGAACATCCTTCAGAGGTCCAGCATGAATGTATTCCCCAGGCCATTCTGGGTATGGATGTCCTGTGCCAAGCCAAGTCTGGGATGGGCAAGACAGCTGTGTTTGTGCTGGCCACCCTGCAGCAGATTGAACCCATCAATGGCCAGGTATCAGTACTGGTCATGTGCCACACAAGGGAGCTGGCCTTCCAGATCAGCAAGGAGTATGAGCGCTTCTCGAAGTACATGCCCAGTGTCAAGGTATCTGTGTTCTTTGGAGGCCTCTCCATTAAGAAAGATGAAGATGTGTTAAAGAAGAACTGTCCCCATGTTGTGGTGGGGACACCAGGCCGGATCCTGGCCCTCGTGCGGAGCAGGAGCCTCAACCTGAGGAATGTGAAGCACTTTGTGCTAGATGAATGTGACAAGATGCTGGAACAGCTGGACATGCGCCGGGATGTACAGGAGATCTTTCGTCTGACACCCCATGAGAAGCAATGTATGATGTTCAGCGCCACCCTGAGCAAGGAGATCCGGCCAGTCTGCAGGAAGTTCATGCAGGATCCTATGGAGGTGTTTGTGGACGACGAGACCAAGCTCACACTGCATGGGCTGCAGCAGTATTACGTCAAACTCAAGGACAGTGAGAAGAATCGTAAACTCTTCGACCTCCTTGACGTGCTAGAGTTTAACCAGGTGGTGATCTTTGTCAAGTCTGTGCAGCGCTGCATGGCCCTGGCCCAGCTCCTAGTGGAACAGAATTTTCCGGCTATCGCTATTCACAGAGGCATGGCCCAGGAGGAGCGCCTGTCCCGATACCAGCAGTTCAAGGACTTCCAGCGTCGCATCCTAGTGGCTACTAATCTGTTTGGCAGAGGCATGGACATTGAGAGAGTCAACATCGTCTTCAACTATGACATGCCAGAGGACTCGGATACCTACCTGCACCGAGTGGCTCGTGCTGGTCGCTTTGGTACCAAGGGTCTGGCAGTCACTTTTGTGTCAGATGAGAATGATGCCAAAATCCTTAATGACGTTCAGGACCGGTTTGAAGTGAATGTGGCTGAGCTTCCAGAAGAAATAGATATCTCCACATACATTGAGCAGAGCCGGTAACCATGTGTGTAGCCAGGCACATGGCTTTCTCTCCTGCTGCTTCAGATCCTCCTCCTAGGTGGCAATCGGCGGCCTCTCTTTTTATTGTTCCAAAGCTTTAGCTATGTTAAGAATAAACTTTTATTGTGAA