Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name VAPB
Plot displaying the genomic locations of a parental gene (in chr20) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name VAMP associated protein B and C
Also known as ALS8|VAMP-B|VAP-B
Coordinate chr20:58389229-58451101
Strand +
Gene summary The protein encoded by this gene is a type IV membrane protein found in plasma and intracellular vesicle membranes. The encoded protein is found as a homodimer and as a heterodimer with VAPA. This protein also can interact with VAMP1 and VAMP2 and may be involved in vesicle trafficking. [provided by RefSeq, Jul 2008]

Retrocopy(s) from VAPB

Retroname Coord Strand Genomic Region ENSG
VAPBP1 chr7:113415944-113416099 + Intergenic
 ENSG00000270997 UCSC

Expression

Transcript Sequences

>NM_004738.5
gcgtgcCGTCAGCTCGCCGGGCACCGCGGCCTCGCCCTCGCCCTCCGCCCCTGCGCCTGCACCGCGTAGACCGACCCCCCCCCAGCGCGCCCACCCGGTAGAGGACCCCCGCCCGTGCCCCGACCGGTCCCCGCCTTTTTGTAAAACTTAAAGCGGGCGCAGCATTAACGCTTCCCGCCCCGGTGACCTCTCAGGGGTCTCCCCGCCAAAGGTGCTCCGCCGCTAAGGAACATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCCTTCACCGATGTTGTCACCACCAACCTAAAGCTTGGCAACCCGACAGACCGAAATGTGTGTTTTAAGGTGAAGACTACAGCACCACGTAGGTACTGTGTGAGGCCCAACAGCGGAATCATCGATGCAGGGGCCTCAATTAATGTATCTGTGATGTTACAGCCTTTCGATTATGATCCCAATGAGAAAAGTAAACACAAGTTTATGGTTCAGTCTATGTTTGCTCCAACTGACACTTCAGATATGGAAGCAGTATGGAAGGAGGCAAAACCGGAAGACCTTATGGATTCAAAACTTAGATGTGTGTTTGAATTGCCAGCAGAGAATGATAAACCACATGATGTAGAAATAAATAAAATTATATCCACAACTGCATCAAAGACAGAAACACCAATAGTGTCTAAGTCTCTGAGTTCTTCTTTGGATGACACCGAAGTTAAGAAGGTTATGGAAGAATGTAAGAGGCTGCAAGGTGAAGTTCAGAGGCTACGGGAGGAGAACAAGCAGTTCAAGGAAGAAGATGGACTGCGGATGAGGAAGACAGTGCAGAGCAACAGCCCCATTTCAGCATTAGCCCCAACTGGGAAGGAAGAAGGCCTTAGCACCCGGCTCTTGGCTCTGGTGGTTTTGTTCTTTATCGTTGGTGTAATTATTGGGAAGATTGCCTTGTAGAGGTAGCATGCACAGGATGGTAAATTGGATTGGTGGATCCACCATATCATGGGATTTAAATTTATCATAACCATGTGTAAAAAGAAATTAATGTATGATGACATCTCACAGGTCTTGCCTTTAAATTACCCCTCCCTGcacacacatacacagatacacacacacaAATATAATGTAACGATCTTTTAGAAAGTTAAAAATGTATAGTAACTGATTGAGGGGGAAAAGAATGATCTTTATTAATGACAAGGGAAACCATGAGTAATGCCACAATGGCATATTGTAAATGTCATTTTAAACATTGGTAGGCCTTGGTACATGATGCTGGATTACCTCTCTTAAAATGACACCCTTCCTCGCCTGTTGGTGCTGGCCCTTGGGGAGCTGGAGCCCAGCATGCTGGGGAGTGCGGTCAGCTCCACACAGTAGTCCCCACGTGGCCCACTCCCGGCCCAGGCTGCTTTCCGTGTCTTCAGTTCTGTCCAAGCCATCAGCTCCTTGGGACTGATGAACAGAGTCAGAAGCCCAAAGGAATTGCACTGTGGCAGCATCAGACGTACTCGTCATAAGTGAGAGGCGTGTGTTGACTGATTGACCCAGCGCTTTGGAAATAAATGGCAGTGCTTTGTTCACTTAAAGGGACCAAGCTAAATTTGTATTGGTTCATGTAGTGAAGTCAAACTGTTATTCAGAGATGTTTAATGCATATTTAACTTATTTAATGTATTTCATCTCATGTTTTCTTATTGTCACAAGAGTACAGTTAATGCTGCGTGCTGCTGAACTCTGTTGGGTGAACTGGTATTGCTGCTGGAGGGCTGTGGGCTCCTCTGTCTCTGGAGAGTCTGGTCATGTGGAGGTGGGGTTTATTGGGATGCTGGAGAAGAGCTGCCAGGAAGTGTTTTTTCTGGGTCAGTAAATAACAACTGTCATAGGGAGGGAAATTCTCAGTAGTGACAGTCAACTCTAGGTTACCTTTTTTAATGAAGAGTAGTCAGTCTTCTAGATTGTTCTTATACCACCTCTCAACCATTACTCACACTTCCAGCGCCCAGGTCCAAGTCTGAGCCTGACCTCCCCTTGGGGACCTAGCCTGGAGTCAGGACAAATGGATCGGGCTGCAGAGGGTTAGAAGCGAGGGCACCAGCAGTTGTGGGTGGGGAGCAAGGGAAGAGAGAAACTCTTCAGCGAATCCTTCTAGTACTAGTTGAGAGTTTGACTGTGAATTAATTTTATGCCATAAAAGACCAACCCAGTTCTGTTTGACTATGTAGCATCTTGAAAAGAAAAATTATAATAAAGCCCCAAAATTAAGAATTCTTTTGTCATTTTGTCACATTTGCTCTATGGGGGGAattattattttatcatttttattattTTGCCATTGGAAGGTTAACTTTAAAATGAGCCCTATCACTGAGAAATACGTGTTTCATGATTTAACTCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATTTTTTTTTTGGTTGTCTTCAGCTGACAGTATGAAAAATGAAACTGCTGAAAAAGCTGAGCACCTGGTCACCCTTGGCCTTCCATTGCTTTGGCCTTCAGTAAAAAGCAGCCTCCCTTCTAGGTCAGGGAACCATGCCATTGAGACTAGTAACGGGCGTTCTGGGCACAGTCCCACTGTGCACAGGTTTGAGAGGACAAGTTCATCAGAAGGAAGGCAGTCCTTAGAAGTCACATACGTTGAGCCACGTTGCTCCTAAGCCTGGCTCTGTCAAGCTGGGTCAGGGGCCTTGAAACTGGAGAAGTGGAAGTCTATGGTTGGTCTGAGTAAGTAACTTCCTGTCTTCATGAAAAAAGTTGACTTTGAATCCCAGGTACTCACAGAAATGGTGAACAGACTTAGTTGTTACCCAGGCACCCATGGATTGTGTTGAGTGTGCAGACAGGGAGGCCACCCCAATAGGAATTCGTCTCCAGGATTTTTCCCATGTGTCCCCCAGTACTTATAAAAGGGAGTGAAAAGACCGAGCTGTAAGGCATGTGCCTTCTGCCACCTGACTTTCCGTGAGGGGACTAAAATTTACTAATTGTAGTTGCTGCAGCCAGTTAAGTCCTGTAGCTTCCAGGCCCTCATGTCTTTGATAGGAGAGTGCTTAGGTGGTCCCCAACAGTGCCTAGGGGTACAGTACAGTCCCATTACACTAGAGCAGGGCTCTATTTATTTTTaaaggatatggccgtgtgttttgataaaactttattcacaaaaacagccgggtcatgggatttggcttgtgagtcTGTAACAGTTCTTAAAAAGAATATCTGAGAAACTACTCTGTTTTAGACCTTTGAAGGTGATTTAGAGTTTTGTGTACATCTAGGAGAAGGTGTTCAGCTTCTCAGAGGATGTGGACATTTTGGTTGCAGCTAAAAATCAGTCTCTGAAGTCTCTCTCCCTTCTAGAGGTTAGGACTTGGTGAACATGTTTGTGGGCCTTTTGACTGAGTGGCAGAAGGAAACTGCTCAGGAAGAGAAACAGGTGACTGATGGGAAGGTTGATTATTTTCTCAGTCATCCTGGCAGCCAAAAATGTGCCAGGAAAAGAAAGAATGTGGAGCACGCGTGGCTCCTGGAGGACTTGGAGATGCATGCACATTTAGGGTGTTTTCCCTAGAATTACATAATGAAAAAAAGAATAAGGCAAAGAGGAGGTGAATATGGGGCCTGTCACAACGGCCTGCCCTGCCCCAAGAGGGTTAAGAGTCAGATAATCGGGACGAAACTGGCATGGAAAGAGCGAGCCTAGGGAGGATGCCGCTGGGCAGTGTGCATGGGGGAGCTGCTGCCAGGCTGCCCTCCAGTCTGCTCCTGTGGTTACTGGCTCCACAGCACCTCAGAGAGGGCGGCCCTGGCTTCAGAAATGCCAGCCATAGTGCTCACAAATGCAGAAGAGATGGAAGCGGTGACAGAATCCTGAAAGTTTTTATTGATTGAAGTTTTAAATTGGTAACTTAAGCTTCCTTGGCACGATACAAAATACCTCTTAAAGACAGCAGGCTTTTTTATTTGTAGGTGTGAGGAACTGGCTTTAACTTTTTTCTCCTCCTAGTTTGCATGTTTTCCTTCTCTCGTCTTCTGAACTGCTGGCACCAGCAGTAATACATACTGATAAAATCAAAATTGATTTTTACCAGTGGCCAGTTTATGGCTAGAGAGACGACTTATACCTCCATAACACAGAAGGGGGAAAAATGAAGAACCTCCAGTGATCCGTGAAAACCTAAACGCTTTCAAACAAATCCCAGGAACAGAATTGCTATCGAAAGATATCATTGCCCAGTTTGCAGGCTATGTTGAGTCAGATAGAACTGAATGTAGTGAGAGCTCAGAGCTACAGAGCCTTTCAGATGAATTTGAAAACAGACTCTGTGTGtgtgtgcatgtgtgcatgtgtgcatgtgtggcatatgtgcCGTATGTCAGTAGCTTGACAGTTTTCAAATCGTGCCTATATTTTTTTGCATACACAAATTTTTGTGTTTGCAAACTCAGAATCCATGCCAAAATACAATGTTATATGTCATTTTCAGCTCCTTCTCTAAAGGAATGGCCCATTTCTCATTGTAGTTTGAGAAATACATGTATGAAGAGATAGGGGTCTTGGGCTTCCCAGTGTCACTTTGAACACCTGAATAACATTTAACTCCTGAGACCTTCTCGGTGTAGAGGCCACTGCTTCCCCCTGCTGGAGATGGCATTTCATTGAAGGGCCTCTCGTGGCTTTCCCTGCCCCCGGCTGTCTGGCCTGAAGAAGGAGAAAGAACCAAACTGAACTATGAAAAGTTACCACTCTGAGGAGACCTCTCTTAATTAACACTTGGGGCCATGTTTGCTGTTGTTGAGAAGGAGTGTTCTCAAAGATGAGCTGGAATGGAATTGTATTTAGAAAGGCCCCTGCAAAGTATATAGATGGATGACTCTAGTTCATGACATACAAATCCCATAAGGCCAACGACCACTCTTCTGGAACACCAAGAGCAGCTCTGAGATCATGCTGGCCCTACGCGAATTGAGTTTCTGTGGCCTAATTGGATTTGGAGAACGCCTTCCCTGGCCCCTTTTCCTCAGACAGATCTGCTCTGATAGGAACCTTTTCAAGAAAGTTACTGTTGTTTCAATGCCACTCCTTACCTGtatagaacatttccaatacattcgctcattgaacttaatccttgcaactgtgactggggggtagatggctctgtttgcatacgaagaaataaaggctccaggaggttaaatCGGGCAACTTTTTAGAACTAAATCAGTCTCTGTAAGGCCTACATTGCTAAGATACCATTTCAGCTCTGAAAATCTGCTTCAGGGAAGTGAGTGGATGAGGCCTTCCTGCCTCAGCTACTCTGCCCGTCTGTACATCTTTTGTGTCTGCCTCCGTACCTTATTCAGTTATTTTCACACTAAAGTAAGTAGAATTAAGACTGTAGTTCAGATGCTTTTTCTTTTTCTGTTGGAAACTGAACACACTACAGACAGTGAAAAAAGGTACATATTCCATTTTCTCATTGCCTGAAGATCTCTGCTGATGCTCCTGGAGAATGACTTTGGGGGCTTTAGAAAGAATATTGCCAGTCCGTCTCGGCAAGGAGATGATGGGAGCGCTTTATATGGAGGCTTTACATGACTTGTAAATTAAATGTGAATGAGGGCAGTTGATTAAAATTGGTATTACAGAAGGGCCCTGCTGAGGTTTGAAAACAGCTGAGCTGCTGATGTCTCAGGCCTTTCCCTGAATTAGCACTGCGGTTCTCCAGGATATCAGCAAAGAGGGCAAGTAATAGAAGCCCCTGATAAGGAGCGTCAGCCGACAGGCAAGCTTGGGAGGCTGTGGGAATGGGTCTGCCCCCAGCTTCACAGACCTCTTCCTCCAGCCTCTGAATCCCATTAGCCACAGCCTAGAACATTAGCTGAGCTGCACAAGCTCACCCACCCCTGTGCCAGGGGGCCCTGACCTCCCTCCATGCCATGTTTTTGGCTGTATCTACGGCACTTAACAATAGGGGCTTTTTATTTTCATTACAGAGATATTTTGAAAAATTTAAAAGACATGAACTCACATAAACAGTTATGGATGATAGTTAAAAGAGAAACGGGTGGAGGTGGATGAGAGGTTGTCTTCATGAATATAATTACTTGAGATTTTTTTTTCTTAATGGAATTAGTTTATTAGAAAATGTCTGTGTTAAATCCGTAGAAAAGGAAGAAAAGTGTAGCAACAAAAATGTAGCCATTATCTAACTTGCCATAAATATTTGCAGTTATGATACCTTGGAATGTTGCCACGATATGGATTGCTTtgattaaaagatgtcagttgaataaaacagtactgtgggagaatcgctttctgctgctagataaatgctgatgtttatttttaaaccaggaaacattgatcctgtaacaatgcccgattacaattgctttattacaccccagggctgatggagatgtaatcacttggctaatggatgtgggtgcaggacagatgctcgcttgctggcctgctttcctgcttgcattctgatgagctGCAGGAGTGCGCCTGGCCTTCTGCAGGTGGAGCTGCTGTCAGAGCTTCGTTTCACTGATACCCAAAGCCATGTCTGACTGAAATAAAACAGGTTCCCTTTTTTTTTCCCTTTGGAAAATGCCAACTAAGGGAGACTAATCAGATATCTTAACACAATTTCATCCAGGCTTAGTGCTAACAAGATTGCGGGGCTTTTTAGGGTTTAAGAAGATGAGAAATGAGTGTGCACGTTTCACACGTTGACTTGCCGGTTTTTCCATGTCATACAAAAAAGTCCTGGCTGTTTCTCCGAACTGGCTGCCTGCATTCCCGTCTTTCTTTTGTTTTTAAGAAATAGACTGAATTCAGCTGTTAATCCTCTAGTACAGTATCCATGTTAAAATGTTTTTCCATTGCATCTTTTATGTGAATTCAAAGGTCAGAATTTATTGTCTGTGATATTGAGACCATGTGTACAAGAACTACTTTTTGCTTTTCATCATTCACTCCTTAGCAAACGTTTCGTAAGTACCCTCTGTCTGTTTGCTACTATATGAGGTGCTGCGAAATTAGTGGGCGTGGCTTTTTATATTTTTCATTCGTGTGTAGCCTAAGTAAGGTGACTCAAGATGATACACCGAGAGAAAAATGCAAAATATATTTGGTTCTCATTTCTGTTGCTGTCGTTTCCTTTTTAAAGACGATTTATCAACTGCTGCCATTTGGAACTTCCTATAAGAAACTAAAAATGATCTATTTCAGTGTTCCTTTCGCCTTTCCTCTGCTTTCTGAATAAATGGTTTCAGTAACCCATGCTGTTCTCTCCCTATTCTACGTCTTTCTCCCTATGTTGAAAAAAGATTCCCACAGTTTCTGATGTGTGTGTTTATAGTCTTCAATGTATGTTAACATGTTAGGAACTGAGTATCTTAAGAGATGTCTTAGAATGCTTTAGTTTTCATAATTTGTCCTTTATGTATTTTTCATTGTATTTGCTGTTTTGACATGGAAGTAATTTAAAAAGTTGGTGCAGGAAAGGACTCTTTACTGTTGCACATTTTGGTTTTCTGATATGTAATAAATTCATGGCTTGGCAGCTGACATGATGTTTCCCAGAGAGAAGGAGATGTATTTCTGCAGGGTCCAGACCAAAAGAGCCATTTACAGCATGTTCTCCCATGTTCCATTATCAGCCTGATGAAACCTGCCCTGCCAAGGCATAAACTTTTGTACTAGCTGTCTCCATATTATGTTCAATAAATTCTGTGCTCTGAATATATTTAAA