Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL23
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L23
Also known as L23|rpL17
Coordinate chr17:38847860-38853721
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L14P family of ribosomal proteins. It is located in the cytoplasm. This gene has been referred to as rpL17 because the encoded protein shares amino acid identity with ribosomal protein L17 from Saccharomyces cerevisiae; however, its official symbol is RPL23. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL23

Retroname Coord Strand Genomic Region ENSG
RPL23P11 chr10:33864363-33864763 + Intergenic
ENSG00000226407 UCSC
RPL23P12 chr1:78666261-78666714 + Intergenic
ENSG00000238015 UCSC
RPL23P2 chr21:28997555-28998042 - Intergenic
ENSG00000176054 UCSC
RPL23P4 chr2:219697810-219698249 + Intergenic
ENSG00000223903 UCSC
RPL23P5 chr2:221592448-221592931 + Intergenic
ENSG00000230406 UCSC
RPL23P13 chr6:39958353-39958844 - Intergenic
ENSG00000180211 UCSC
RPL23P8 chr7:20827316-20827820 + Intergenic
ENSG00000219451 UCSC
RPL23P14 chr7:26276188-26276666 + Intergenic
ENSG00000232383 UCSC
RPL23P10 chr8:36581198-36581581 - Intergenic
ENSG00000244708 UCSC
RPL23P15 chr8:64570983-64571146 - Intergenic
ENSG00000253800 UCSC
RPL23P16 chrX:24681907-24682142 + Intergenic
ENSG00000236487 UCSC

Expression

Transcript Sequences

>NM_000978.4
CGGCGTTCAAGATGTCGAAGCGAGGACGTGGTGGGTCCTCTGGTGCGAAATTCCGGATTTCCTTGGGTCTTCCGGTAGGAGCTGTAATCAATTGTGCTGACAACACAGGAGCCAAAAACCTGTATATCATCTCCGTGAAGGGGATCAAGGGACGGCTGAACAGACTTCCCGCTGCTGGTGTGGGTGACATGGTGATGGCCACAGTCAAGAAAGGCAAACCAGAGCTCAGAAAAAAGGTACATCCAGCAGTGGTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGGCGTGTTTCTTTATTTTGAAGATAATGCAGGAGTCATAGTGAACAATAAAGGCGAGATGAAAGGTTCTGCCATTACAGGACCAGTAGCAAAGGAGTGTGCAGACTTGTGGCCCCGGATTGCATCCAATGCTGGCAGCATTGCATGATTCTCCAGTATATTTGTAAAAAATAAAAAAAAAAACTAAACCCATTAAAAAGTATTTGTTTGCAGTGCTTGTCTCCCTGttcacttccagggttcaagcgattctcctgcctcagcctcctaagtagctgggattacaggcacctgccgtcatgcctggctagtttttgtatttttggtggagacagggtttcaccatgtttgccaaacgactcaaactcctgatctcaagtgatctgcccacccaggcctcTACAGTGTTTTTGACATACCCTGACCATCACTTTTCTGAAATGGAAACTCTGGGCATTTTTTTTTTAAAGCAATCCTTGCTTTTTTGTGAGTTTGCAGACTTTCAGCATCTTCCAATTGCTGTATTTACAATTTTGGCCTCAAAAAGTATTATTTGGGTTTTGAGTCCCAAAAATAATAGTAGATACTGCTCAATGACTGGCTATACATGGTAGCTTCTCCTGGAGTGAGGAAGGCATTCAAATggctgggcgcggtagctggcacctgtaatcccaacactttcggaggccaaggcaggcagatcatgaggtcaggagttcaagaccaggctgaccaacgtggtgaaacctcctcttttctaaaaatacaaaaattagctgggcgtggtggcgcaccgcctgtaatctcagctactgagagaatcgcttgaacctgggaggtggagtttgcagcgagtcgagattgcaccattgtactccatccagcctgggcaacggagcaagattccgtTCCCGCCCCCGCCCCAAAAAAAGGCATTGAAGTTAAGATAGACTATATAGTTAGATCCTGGACACACACATGGATTTTGAGGAATGATGTGAGTTTGTTTATGTATGTACATTTTAGCAGTTAACAGATTTGGAGTAAATTGAATATTTATAAAACAACAGTAATTGCCATGTAGGTTTACTGTCATAGTGGAAGATGATTAAGTTGATGGTACCTACAGGTATTTTGCTATGAAAATGTTTTGACAAACAGGATGATCGTGTAATTTATGTTCCAAGCTCTAGTTTGAGAATGGAAGAATGTGGTAAATTTTTGCCAACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGTTGTTAGCATTTCTTTCTAAACGTGTAAGAGTTTATTTAGGTGACACCCAGCGTTTTGGAAAAATGGGTGTTTGTTTAGAACAATAATTTGGAGGGAAGTGGACTAAACAGGGTTTTTAGATTAAGGTTTGTGTTTATGTATCTGTATCTGCAAATACTCAGCCATAAATGTTTCTACCTGTAAGTTGGGTATAATACAAGCTCCACTTGGTATCAAAAAGGACTACCCTTAGTGTCTTCCATGACTAGTTATGGAATGTACCAGACCTAGAGAGGAGTTGTTCTAacctggagcttttgaaaatgtttccggtccataccctagaccaattaagtcagactgcagaataggactcagacatcagaattgtgaagctcccaggagatgtcaaggtatacccaagactgagaaccaGTACCCTGTCTAGACTGAACCAGGCTTGGTTTTAGAAGTATTAAATCTCGCctgggtacggtggctcacacctataatcccagcactttgggaggctgaggtgggtggatcatctgaggtcaggagagtgagaccagcctgtccaacatgttgaaaccccatctctactatacaaaattagccaggcatggtggtgcatgctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaaccccggagatggaggttgcagtgagctgaggtcgcacgattgtgctccagcctgggcaaccagtgaaactctggggggaaagaaaaaaaaTGTATTAAATCTCTAGTTTTAGAGAGTTACACCATAACATCCCTGAGTATGGTCAATTTCAAGTCAGCTTTAGTGTGACAAGCCCCTAGGCCCACCATTTATGTCTTTATATATTATGGCAATATATGATCCTTATATATTAACCACTAATCGCTGCTGtttttgaatgttatcttttctgaggcagtcttgctctgtcacacaggctggagtgcagtaacaccactgaagctcactgtaactttgaactgctggacttggaatcctcctgctgtggccttcaaagggctgcaattacaagtgtgagccactgcatccCACCTCACATTTTATTCTTTGGAGATTTTTTTTGACTTGGATTAAAAAACTTTATATTTACACTTCA