Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Csnk1a1
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name casein kinase 1, alpha 1
Also known as 2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a
Coordinate chr18:61687307-61723391
Strand +
Gene summary Enables protein kinase activity. Involved in protein phosphorylation. Acts upstream of or within cell morphogenesis. Located in ciliary basal body. Part of ribonucleoprotein complex. Is expressed in several structures, including central nervous system; endocrine gland; metanephros; retina nuclear layer; and thymus primordium. Orthologous to several human genes including CSNK1A1 (casein kinase 1 alpha 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Csnk1a1

Retroname Coord Strand Genomic Region ENSG
Csnk1a1P1 chr2:15390772-15391258 + Intergenic
ENSMUSG00000083631 UCSC

Expression

Transcript Sequences

>NM_001357500.1
AGAGTGCTCCGCGCCGTGAAGAAGCGGCTCCCGGGGACTGGGGGCATTTTGTGTTGGCTGGAGCTAGAGTAACAAGATGGCGGCCTCGGCGGAGTGACGGCTTCCCTCCGGGCCGGAGCCGGCGGCAGTGGTGGCAGCGGTACCGCCCGCCCTCGTTCACCGCGCCCCTTTCCCAGCCCGCGACGTCGCCGCGACCACGAAAAAAAATCAGCGGCGGCCGCCCGAGAACAACAAGCGGCCGAGCTTCAGCAGCCGCGACCACCCTTCACGAACCGCGGCCTGGCCCTTCAgcgagcggcggcggcggcgatcCGGCTTCTCTCTGCCGCCTGTGCGCCCCGTGACGCCGACAGAGCCTTGGGTTTAGGTTGCCCGCCGCGCTTCTCACTTCTGCCGCGGGTGGAACAGCCCCGGAGGCTTCCATCCTCTTCCTGAGGTGTCGGGGCTCGGCCCCCCGCCTCCATCTTCGCGTCTCAGGATGGCGAGCAGCAGCGGCTCCAAGGCCGAATTTATCGTCGGTGGAAAATACAAACTGGTGCGGAAGATCGGATCTGGCTCTTTCGGGGACATTTATCTAGCGATCAACATCACCAATGGCGAGGAAGTGGCAGTGAAACTAGAATCCCAGAAGGCCAGGCATCCCCAGTTGCTGTACGAGAGCAAACTGTATAAGATTCTTCAAGGTGGGGTTGGCATCCCTCACATACGGTGGTATGGGCAAGAAAAAGACTATAATGTACTAGTCATGGATCTCCTGGGACCCAGCCTTGAAGACCTCTTCAACTTCTGTTCAAGGAGGTTCACTATGAAGACCGTACTTATGTTAGCTGACCAGatgaTCAGTAGAATTGAATATGTGCATACAAAGAATTTTATACACAGAGACATTAAACCAGATAACTTCCTAATGGGTATTGGGCGTCACTGTAATAAGttATTCCTTATTGATTTTGGTTTGGCCAAAAAGTACAGAGACAACAGGACAAGGCAACACATACCATACAGAGAAGATAAAAACCTCACTGGCACTGCCCGATACGCCAGCATCAATGCACATCTTGGTATTGAGCAGAGTCGCCGAGATGACATGGAATCTTTAGGATATGTTTTGATGTATTTTAATAGAACCAGTCTGCCGTGGCAAGGACTGAAGgctgcaacaaagaaacaaaaatatgaaaagattAGTGAAAAGAAGATGTCCACTCCTGTTGAGGTGTTGTGTAAGGGGTTTCCTGCAGAATTTGCCATGTACTTAAATTACTGTCGTGGGCTGCGCTTTGAGGAAGCTCCGGATTACATGTATCTGAGGCAGCTATTCCGCATCCTTTTCAGGACCCTGAACCACCAATATGACTACACATTTGATTGGACGATGTTAAAGCAGAAAGCAGCCCAGCAGGCAGCCTCTTCCAGTGGGCAGGGTCAGCAGGCCCAAACCCCCACAGGCAAGCAAACTGACAAAACCAAGAGTAACATGAAAGGTTTCTAAGCATGAATTGTGgaagagaagcagcagagcagacGATTGGAGCAGCGTTTGTTTCTCCCCAAACCTAGACATTTTAGTTCATATGTACACTAGCCAGTGGTTGTGGACAACCATTTACTTGGTGTAAAGAACTTCATTTCGGTATAAACTGGCTCTGGGTAGCACTGCGGATCCTGAGCTGTAGCCACTGTCCTTGTGAATATTAACTGAGGTAGTGAAACATGGTGTCCGGTTTTCTattgcattttttttcaagtggaAAAGTTAACTAAATGGTTGACACACAAATTGGTGGAGAAATTGTGCATAtgccaatttttattttatttttttgttaaaatcttttattttgaacTATACTGCTTTGAGATCTCATTTCAGAAGAACGGCATGAACAGTCTTCAGCCACAGTTGTGATGGTTGTAAATGTTCACAATTGTGTGTTCTTAGGGTTTTCCATCCCTGGGGTTTGCAAGTTGTTAACTTAAAACATTCTTTAAATGGCTGGCTTCTTGTTTGCAAGCCAGCTGATATGGTAGCAACCAAAGATTCCAGTGTTTGAGCATTTGAAAGACTCTGCCTGCTTACCTGTGCTAGAAATAACAGCATCTAAAGTGAAgacttaagaaaaaaaacatagcGACTACTAGATTCTCTTTAGGACTCTGCATTAACTCTATAATGTTCTTGCTattaaaaaaaagcatatttGTCACGGAAATTTAGTTACCGTCTTACAActgaacatgtatgtgtgttgctTAGATAAATGTAATCACTGTAAACATCTATACGatctgggattttgtttttattttgaaatgggaGCTTTTTGTTTACAAGttcattaaaaactaaaaactgtTTCTGTAAGGAAgtgaaatttttttaaacaacaaaatgCCTTGGCTGACTCactatgaagtgtgtgtgtgtgtgtgtgtacatatatatacatatatatgcacacatatatataccatccccagttttttgttttgttttatattttgagacagagtctcattttgtagctctagctggcctggaactttatagatcaggctggcctagaactctcagatcctcctgactctgcctctctaAAGAGCTGGGACTGAAAAAaatgagccaccatgtccagctttccCTAATTTTTTGATAGACTACTTCAAGCCATTTGTTATATGATATTCCTTTGCTGCAaaaggtttggttttgggtttttggggggggggggctgttctTGATCTGAAGAGAAAGGTATTCTTTGGCTTTCTGTTTGTAGCTCACAGGCACACTACCCCGTGCTACAGCTGTGGGAGCTTTGGCATTGACTTCTGCCGCCACTGACTAGCAGATGAACTGATGACAGTGAAAGTGTTAAAGGGTTTAACTATATTACAAAATATGTTTCTTCAAAATCCCTGTGAAATGGCTGTAAGGTTGTCATACAGTGTGAAGTTAGTGATTGTTGATCCTCAAGCCCCACCTCTCTAAGTACCTGTGCACGCTTCCCCCAGTCTTTCTTGGTTGCTCTTCAGTTGTTTCTCTGATCCAAGAGAAGGAAAAACTTACAGTAATTCTTTAAATGGtgtaatttattcatttacagcATGTcaagataaattaaaaagaaaatttgtctGAAAATGCTGCCAGGAGCCTATTGTGTAACTAGGTGTTGTGTATAATCTTGAATTGTAAATTGACCCATGTTTGGTAAGATTGTATCAGAATTGATTTGTAgtagttttccttttcttctcccccccccccttttttttgaaaCAGCAATAATTAACTCCATGATTGCCACATTCTGTCACCAAGAGATGTGTTATTACCGTAAAGCTGAAATAATCTTCTGAGGTGGATCTGATGGTGGGGTGGCAGCTTCATGCTTGTCAGTTTCTTGACTAATAAACCCTTTGATACTTTTAGCGGGAAATCAGTCTCATAAAGCTATTTTGAGTATAGTTTGTGTAAAATAAAACTGTTCAGCTTTGGCAATAGCTTTCCAAGTTGAACTCCCTCTCTCTATCTAGCAGGATATTTTTTCAGTGCTTTTATTTACTATGCACTTAGACTATGCactttttctgaaatatttttgtaacacttttttgtatttttgccATTTGAAAAGGTTGTGGTGTTGTTGGTATGTCATTAAGTTGCAGGTTTGAAACTGCTGTTAGCTTTGTGACTCAGAATCTAGAAATGTTCTGTCCTGGTATTTTGTCGTCCCATCTACAGCTGGAGCTGGAATCCGTTGATCTTCTAGCTACCATTCATTTTCTTCACAGTTCACAAAGAAGAGCGTGAAATTCAGTGAATGCAGTTACTAATCCTGTCTGGAAATGAATCTCATTTCACCAAATCAATTGTGTTTTTCCACTAAAATGATGGTGTATGTTGAAGACATCACTCTGAGATTGGAAGACCTCACCACTAAAGGCTCCATCCACAGTGGCTGGCTCAGCTGAACTTTAGGTTgccattcttttctttgttcacCATTGGGTGATGCAGCTTTTTAACTGTTGGGAGATGGCCATTCTAACTACTGTTGAATGTCTCTGTTTTGGGaaggtaaaataagaaaataaaaaaagaatatatatgaagggagAGGCTGGTTGTCTCTCCCATGTGGTTGTGAATATGCTCTTATGACCCACAAGTGGACATACAAGGCTTATCTTTGCTGTGATTTCCTCTCTGCTTTAAGTCTATCATACTGTAAATATTTCAGAGTGTACTGTAACACGAGCTGAATTGTGATAAATCATGAACTGCAGAGACAGACGGTGTAGTCTAAGCCAGTAGGCTGTTCTCCCTGGAGATTGCTGGGAATAATAAAGAATAGTTTATTGTAACTCAA