Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lztfl1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name leucine zipper transcription factor-like 1
Also known as 5530402H04Rik|6130400H19Rik
Coordinate chr9:123523469-123546690
Strand -
Gene summary Predicted to enable identical protein binding activity. Predicted to be involved in negative regulation of protein localization to ciliary membrane. Predicted to be located in cytosol. Predicted to be active in cytoplasm. Is expressed in several structures, including brain; sensory organ; testis; and upper jaw incisor. Used to study Bardet-Biedl syndrome 17. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 17. Orthologous to human LZTFL1 (leucine zipper transcription factor like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lztfl1

Retroname Coord Strand Genomic Region ENSG
Lztfl1P3 chr19:43269225-43272664 + Intragenic
 ENSMUSG00000047509 UCSC
Lztfl1P1 chr9:39951162-39952071 + Intragenic
 ENSMUSG00000111553 UCSC
Lztfl1P2 chr9:55928599-55929859 + Intragenic
 ENSMUSG00000110957 UCSC

Expression

Transcript Sequences

>NM_033322.3
GTCTCCGTTCCCATTGGCAACGCGCGGCTTCTAAACAACCTCCGTTCCTCAGGCCCCGGTGCCGGCCTCCCTGTTTCCTGTCGGATCCGCCGCCACCATGGCAGAGTTGGGCCTAAATGAGCACCATCAAAATGAGGTCATTAATTACATGCGTTTTGCTCGTTCAAAAAGAGGCTTGAGACTTAAAACGGTAGATTCCTGCTTTCAGGACCTCAAGGACAGCAGGCTGGTGGAGGAGACTTTCACCATTGATGAGGTTTCAGAAGTCCTAAATGGGCTGCAGGCTGTGGTACACAGTGAGGTGGAGTCCGAGCTCATCAATACAGCTTACACCAATGTCCTGCTCCTACGGCAGCTGTTCTCCCAAGCTGAGAAGTGGTATCTAAAGCTACAGACAGACATCTCTGAACTTGAAAACAGagaatTATTAGAACAAGTTGCTGAATTTGAAAAGGCAGAATTTGTATCTTCAAGTAAAAAGCCCATCATAGATATCACAAAGCCTAAACTTGTTCCAATTAATGAAGGTGGAACTACAGAGCTCCTAAACAAGGAAATTTTAAGACTTCAACAAGAGAATGAAAAACTAAAGTCAAGGCTGAAGACCATTGAAATACAGGCTGTAAATGCTCTGGATGAGAAGTCAAAATTGGAAAGAGTACTTCAAGATTTACAGCTCGATCAAGAAAACCAACAGGATTTGCTAAAGGCCCAAGACTTGGATGACTTGGAAAATACAGTTGCAACTCTTAGGAGTGAATTTCAGAAGACACTTAATGACAAGACAGAAAACCAAAAATCTTTGGAAGAGAACCTAGCAGCAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGCTGAGCATGGCTGAAAAGGAGTTAGAGAAGAAATTTCAACAAACAGCAGCTTATCGAAACATGAAAGAGATTCTCACCAAAAAGAATGATCAAATCAAAGACCTACGGAAAAGACTGGCAAAATATGAATCTGAAGATTAAAGACTGGAGATTTTGTCTAGAACCTgccacacatgaacatacaagctATCTCCATTCACCTCAGGCATGTATTTAGAAGCATTTTGTCATATTCTGTTCTTTTTCCAATGTTTAGGCTTTCCTTGTAATATTAGAACTATCATTCTTATCTTCAGTTCTGTAATTgcgaagagaaaaaaaatgtaatgattCTTTTCTATTGTCCCAAATACGCCTCTGTCATATGCTCCAGAGCCTCCATGCAAGTACAGTGAGATTTCTTCATGGTAGACAGCAGTTTAGAGTGGGAAGAAGAGCCATCCTTTTGCGTTAGTGAGTGAACTTTTTAATGTTAGAGAAGCTGGTAACATCTATACTTGTACAGTCCCTAAGTATAAAGATAAATAGTAAagttattaatattttcaaataaacttttattttaataacgaAATCTTAATTTATCTAATCATCAAAATGTATAAACTCATGGAAAATATGTTTACTTTCCACTCTAGTCAACATTTCTAATCAGTTGTAAGGGAGAATAAGCTGCACCTTGAACCTCAGCTAACCTTTGCATCTCTCCGTCATGAATGCTGCTTATTATAGGCAGACGTTTTTTGCGTCCTTATTTACCATTGGTCTGTGTTATGAACAGAGAAGTCAGATTCATCGTATACTTTCACAGTTTAAAAAGCAGATGGACTCTGAGTACGTGTAACCTTTAGAATTATTTGCAGAATATCCTTTTAGCTTATATGTGAATTAGAATTCTTTCAAACTTTGACTCAACATAAAGGCACTAAGTTCCAGGTTGAACTTTGGTTTGTATGTGTATagaaaaatggcattttcaagagATTTTAATATCTCCATTGATGTACTTTTCCTCGGGTGACCATATATAAAGTATCGGAAACCAGACATGACGCCTACAATGTGTGGTGCGGTGATGTGGTATGAGAATAAATAAAGACCACAAGGCAGGTAAAActcagaaagaaagcatttaaccgTCACGTGTTAACATGGAGGAAGTGTTCTATTTCTCAAAGCAAACATGTCACATCCTGTGTGAACACTCTAAGAGAGACTTTTCCATCTCCACCAATAGGGAATTTATTCCCAGAGAAGAGTACATTGACCAGAGAGTACATCTTTATTATTTTCACTCACACACTTCATATTAGCTTTGACTATACTGTGAGACTTTTGTAACTTTGTTAAATACTAAACGAACAAATAATAATGAAGTgatttttcccttaaaaaaaaaaaagctgggaagGCAATCTTAGGATGATAAATGAAcctgaaagggaagagagaaaaatatataaaaacaaagcaacatttcctacacattttttttcatccATTTGTTTGCAGTTGGACCGCTCTTCAGTTTCACGTAGGGCTTGCATTGAGGATGCACTTTCACCCTGTGTTTCTTTAGCCCAACATAATTCCCTCTCTGAAATTCCATTTGTGGACCAGGATGTTTTGAATAAGTCAGAAACCAAACCTTGTAACTAAGTGGAAAATGTGTCTGAGAAATGGTTTAATTGTATTCTCCCTCCACCTTTCTCAGTTGAAGGCCAGGAAGAAAAGACTTGGTAAGACACTGCACCACATGTAATACATTGCTGGTTagaattttgatttgttttgttggtggtggcttTGAAATATTCTGTGTAGTATGTTATACTTGTTGAATAATAAATTCAAAAGTATTTCTGAAACCTTAAAAACTGTTAAGTAGTAAGGTAAACAGATGGGTTGCATAACCATTGtgatgcctgtcttctacagcaTGTACTGCGTAATCACTGTGCCCCTGTCTCGTACCTGTCTCGTGTGGCACTGATTCTCCTTTTTTCCACTgttgtgctttgtttttaaactcaAACCTCAGCAAAATTTCACCTGGTTTCCCAGTTTTAAGATTTACTGAATCATTTAACTGAAAAGGCCTGTTTAGTCTATATATTTTGGCTCTCTAGGAAACTGCTTCGAGCCCTAAGTGAGCGGATAGTGTCCAGGCAACTGTGGACTGTCTGCTGGTAAACCATCTTAATGACACTCTTGGCCAGGGTGCAGCACTTAACCTACTATGCACAGGGCTCTGGGATCAGAAcccacacaataaaataaaaacaactaaagaaGATGTGGCTTTGATTTAACTTTAAATTGAAGCTTTTGCAATTATGATTGAGACATTTtgttcacaaaaataaaatgcaaagggTTTTGTTATTAATGCCTTCAATTTTGTTATTAATATCAATTTAAATGGTTATTTGCTCTCATCTtacatgtgtatctgtctgtgttgAATATATATTTAATCATTTGTTTATGTCTTATAAATCTTATATAGAATATTTTGCTCTTTTAAATGTGTAATAATACTTGGTAAAGCCTTTACTATCTATTATTTCCACTTTGATAAACTGAATGAGATTCTTAGATATCTTTATAATTAAATGTTTGCATTTTTAATACATTAGATTATAAAACTTTGGTATTGTTTACCCTCTGGTTATGCATAAGTGCCTGTGTCCTGAGCTTTGCTGTTAGAAATTTAAGACATGATTTATCTCATATAATCAAGTCTTTGAAGATAATTCCATCTCAGCAAGCTAAACCAccatcaaagaaacaaaacaaacaaaaaccattaaaTATTTCCTGAAGGGAAATCATAAAGAAAGGTATTAGGATGGCCTTGATATCTTTCATATTGCCACTAGGTCAGCCATTAAAGGTACCACAAAATCACCTGTTTATgtgaattaatgaaaatatagtCAGAGCTGAAGAGCTGGCTCACTAGTTAAAAGCACATAGTTATCTTGCAGAGAGTCTATGGCATAGAGTTGAAACCTAATTCCAGGCTCCTacttgatggctcacaaccatctgaaactctagtcccaagggatctgacaccttcttctgacttctgcaagcACCGGGGCTCATGTGGTGCTAAGACATACATttatgcaaaacactcatacacataaaataaataaatcaaatcaatagaaagaaaggaaagaacaggaggaaggaaagaaggaaggaaggaaggaaagggaaaaaagggaaaagggggggaaagggggaaggggagagggagatgtatcaatctctgttttcatttctcacTGTGgccttggaaaacaaacaagcttATTAGGATTACTGTACATCCATGCTGAGGGCTTAAGGCACTCTTCCTTAAGAGTGAAGTGCATAGGATCTGCTGCATCTTGGAAACCTCAAGACTTCCCTGTTGCATTGCATGAAATTATCAGTCATCCATCTCAGCTTTGCTTTAAATCCTGGAAGTATGTAGGTGACTGATTTGGGACATATAGATGCTATATGTGCTTTATTTCTTCCTCTCGCTGTATTACACTTGCTAGGATTTCTAGTTAACTAGAAATGGTTGTAGAAGACATTCTTGTTTCTTTTGCGGTCTTGGGggaaatgctttaaaattttaataagaatTATATGTTCAATATTCTATTATCAGATAAGGAAGTTCTTACTTTGCTAAAACCTACAAACAGGTGTTaaatttttccaaaattctttttcTGCATTTACTGAAAtgataatgcttttttttttttttttctttttaaagacaagagtcatactatatagcccaggctgtctttgaaatCTTGCTTTTGATGCCTTCATTTCCTgggcacattttatttttttaaatgttaaactaTCCTCAGTTGTTAACAGTACTGCCCTTAGCCATAGCAGTATGTGGGTGCTATAGGAGAGTGGCTCTGCCTACTAGTAGGTTTTTCAGGCAAGTATTAATCTGTTGCTAATCTTAGATTTGGAAGGATGCCTTCTGATTCTCCCAAAGCATAGAAGTATGGGAAGCTATCTGAAGCCATCTCCCACTCATATCCTTTCCTCTTGGGAGGCTTCCAATGTGCTCAGAATAGATTGGcgtgtaaaatataaaaatacttacTATGAGGCCTAGCCTTGGTCTCTCAGTGAAACAGCATCTCACAACTGTTGCTGTTGTTATCCTGCCTGTTTGGATGAGCTATTTTCCTTTTGGATATATGGGGGAGGCCCAAGAAGCTGGCACCTTCGGCTTACTCTCTTTTGTTATTGATGTAAGTAATAAACTGCCTGACTCTAAAAACAGCTCATTGCATCTTTTACCATCTGTCTTAGTCTGACCTCGATCTCACTTTGGCTGCAGCTGTATATGTAGTTACCTCTCAGGAACTAAGGAATACAACCTACAACTGCTACAGTAGCAATTGACAGCCAGCCTTCTGCCATCTGCACTTTGAGAGCTGTGCAGCTGAAGAAAATGCCTACCCAAGTTTATGCTCCCtttgggaagaaaggaaaaggagactgTAGCCAACAGCAGTCACCCCAGATATAAAAATGTTCTGTCAGGCACAGTGTGTGTTCTCTTCCCAGGGTCTATAGCCGTTCTGTTGCACCTGAGTGAGACTCCTGATGATGCCCTTCCAGTTGCCCTCAGGCTGCCATCACCAAAGCTGAAGCTCACAAGTGATGCCCAGCATTTATATGCCCCAGCCTGTCTACCCCTGGATTCTGACCTCAGTTATGATATGTTATAGATTGCTGGGTCTTAAGTTTTGCAATATTCATGTCAAAACTGGTCTGGAATTTTCCTTCCTTGGTAAACATCTCTTGAAAGCTGTCAACAATGTTTCTGAGACCATAAATgattaactttaaaaaacaaaacaaaaacaacaacaaaataatgtttGATCTCTGATTATATTCAGCGAAAGTTTTAAATACTTGAACCAGCATTTATAAGTGCAGTGATCTGAAGGAAGCCCATTTTGAAGAAAAGGCAGTAGAGAGGAAAGAGTAGGAGTGAGGTAGTGGGATAATGAGCAACTGTGTCTGTATCTCTTAGGACATCTCCCAACAACCCAGCAGAGGGTTTGCATGACTCAGGTTGCTGCTGTTTGTCCTGGGGTTTctgcagcaatggaggagtgtcttcAAAGTGTACGGTGTGAATTCAGTTATCAGTGTTGTCTTGTATAAAGTTCTCTATAGTCAGCAACTATCTGCTGTTTTTGGTTTTACATCTTTTCCTTATGCTCTAAGTTCTTAACACATAGTTTTGGACCTCAAAATAACATTTTAGAGTTATTCTAGGCTCAATAGTTTTTGCTTTAGATAATTATTACATTTTCCTAAATTTGTAATTGCTTTATTCTGTCAGatcttttaaataatatatattcatttttaaggGAATATCTGATGAGTTTTGGTAAATGTGAATCTCCATGTGACCTCTGCCACAATTGAGAAAGGGGATATTTTATCCTTTTCAGCCCCTTGTATCACTCTTCCTGATCTGGTACCTGAGCAACCGCTGATCTGCTTTTTCTCTTGACATCTTAatgtacctttttaaaaattcatatgaTAGAATCATAGCCTAATTGTTAAATGTACCTTCTTTCACTCaacaaaatgtatttaatatttaagatCTGTCCTTGTCTGTGTGGATACTAGCAGTATATTCCTTCAATTGTTGAGAAGTTCCCTGTAGTATGGTCTATCATAGTTTGTTTATTCAACCAACTCTcaagaatattttcaataaaatttactaaatctcatacacaaaa