Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Gabarapl2
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2
Also known as 0610012F20Rik|2900019O08Rik|GATE-16|Gef2
Coordinate chr8:112667335-112679547
Strand +
Gene summary Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including autophagosome assembly; autophagy of mitochondrion; and negative regulation of proteasomal protein catabolic process. Predicted to act upstream of or within intra-Golgi vesicle-mediated transport. Located in Golgi membrane. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and immune system. Orthologous to human GABARAPL2 (GABA type A receptor associated protein like 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gabarapl2

Retroname Coord Strand Genomic Region ENSG
Gabarapl2P2 chr1:71748343-71749276 - Intergenic
 ENSMUSG00000101834 UCSC
Gabarapl2P1 chr1:157210996-157211901 - Intragenic
 ENSMUSG00000087632 UCSC
Gabarapl2P3 chr3:141889666-141890581 - Intergenic
 ENSMUSG00000105015 UCSC
Gabarapl2P4 chr5:24322800-24323725 - Intragenic
 ENSMUSG00000106133 UCSC
Gabarapl2P5 chr5:76220558-76221459 - Intergenic
 ENSMUSG00000107020 UCSC
Gabarapl2P6 chr8:127766598-127767452 - Intergenic
 ENSMUSG00000110492 UCSC
Gabarapl2P7 chr14:120257869-120258370 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_026693.5
AGCCGGAAGTCCCGCCTGTGGAGTAGTCgtcgctgccgccgccgcctccgTTGTTGTTGTGGTCGCTTCGCCGAAGTCCGCGGCTCGAAGAGCCGGCTCCGTCGCTTCCCGTCGCCATGAAGTGGATGTTTAAGGAGGACCACTCTCTGGAACACAGATGCGTGGAATCCGCGAAGATCAGAGCGAAGTACCCCGACCGAGTTCCGGTGATCGTGGAAAAAGTCTCGGGCTCTCAGATTGTTGACATAGACAAGAGGAAGTACTTGGTCCCCTCGGACATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCCTCCGAGAAGGCCATCTTCCTGTTTGTGGACAAGACAGTCCCACAGTCCAGccTAACTATGGGACAGCTTTACgagaaggaaaaagatgaagatgGATTCTTGTATGTGGCCTACAGCGGAGAGAACACTTTTGGCTTCTGAGGCCCTTGCTGGGCTAGGTGCGCCCTTCCTGCTTGTGTCTCTTGTAAATAACTGGCTGTTCTCAGTTACTCTGCCAGAGCCTCCACACAGACCTACTAGTGCATTTGTAACTGgatttatttcttaatatattggaaggttttgtttccttagattAGTAAATTATCATACagagttttattttcagttttctttttgtgCACTGTCCTCATGGCTATTTGCTCCAGGGAACCTGTCCTCTGGGAATCATATTTAATGAAGATATTTCCGTAATGAAGGGAGGTAGGTGTGGTGGTAAAGGGAAAAGGAGGGGCTGATGCATAGTTCTGGATTATGTTGAAAGTGTTAGATGGCTAAGTATTAAAAGCACCCAGATTAAATCCTTAGCAATCAGAACACTTGCTTCACTAGATTTTGCCAACTGCAAATCATGTTGGACTGAGCTAATCTATTCTTCTTTCTGAGACTATTAAggtaaataattaacaataaagcCTCCTTATAAAGGCA