Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Smarca1
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
Also known as 5730494M04Rik|Snf2l
Coordinate chrX:46898247-46981490
Strand -
Gene summary Enables chromatin binding activity. Involved in neuron differentiation. Acts upstream of or within brain development and regulation of neural precursor cell proliferation. Located in chromatin. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; limb; and sensory organ. Orthologous to human SMARCA1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Smarca1

Retroname Coord Strand Genomic Region ENSG
Smarca1P2 chr4:147362908-147363162 + Intragenic
ENSMUSG00000082925 UCSC
Smarca1P1 chr4:146337970-146338224 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001358619.1
GGAGGGCGATGGGGGGAGGCCATGACGTAGGGTGGGTGGACGGAAGTGGGGCAGGGTTGAGGGTTATTTAAAGAAGGTGGGGGGCGAGCGAAGGGGTTGGAAGCTAGTATTCTCCACCCCTGCTCTAGCAAGCTCTTTCCAGCGCAGCCACCGCTGTCGCACAGgaacctcccttctccccttcctcgtCCCACCTCGTCTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAGAGGATGAGCAGCCCGGGCCGTCCACCTTTAAAGAGGAGGGAGCGGCTGCTGCCGCCACCGAAGGCACCACGGCCACTGAGAAGGGCGAGAAGAAGGAGAAAATCACTTCTCCATTTCAACTCAAACTTGCTGCTAAAGCTTCCAAATCTGAAAAGGAAATGGATCCAGAATATGAAGAGAAAATGGTAAATATGCCCTTGAAAGCAGACCGCGCAAAGAGATTTGAGTTTTTACTGAAGCAGACGGAACTTTTTGCACATTTCATTCAGCCTTCAGCACAGAAGTCTCCAACATCTCCTCTCAACATGAAACTGGCTCGTCCTCGAGTAAAGAAAGATGACAAGCAGAGCTTGATTTCCGTTGGAGACTATCGCCACAGGCGTACAGAacaagaagaggatgaggagctTCTCTCAGAGAGTAGGAAAACATCGAATGTGTGTGTCAGATTCGAGGTCTCCCCTTCCTatgtgAAAGGAGGACCGCTGAGAGATTATCAGATCCGAGGACTAAACTGGTTGATTTCTTTGTATGAAAATGGAGTCAATGGTATTTTAGCTGATGAAATGGGTCTTGGGAAGACTTTACAAACCATTGCCTTGCTTGGTTACCTGAAGCACTACAGAAACATTCCTGGACCCCACATGGTTTTAGTTCCCAAGTCTACTTTACATAACTGGATGAATGAATTTAAACGATGGGTTCCATCTCTCCGTGTTATTTGTTTCGTTGGAGACAAAGATGTGAGAGCAGCTTTTATTCGTGATGAAATGATGCCAGGAGAGTGGGATGTTTGCGTGACTTCTTATGAGATggtaattaaagaaaaatctgTGTTTAAAAAGTTTCACTGGCGATACTTAGTCATCGATGAAGCTCacagaataaaaaatgaaaaatctaagctttcagaGATTGTTCGTGAGTTCAAGTCAACTAATCGCTTACTTCTAACTGGGACACCTTTGCAGAATAACTTGCATGAGCTCTGGGcattacttaattttttattgCCGGATGTCTTTAATTCTGCAGATGACTTTGATTCTTGGTTTGACACTAAAAATTGCCTTGGTGATCAAAAGCTTGTGGAAAGACTCCATGCAGTTTTAAAACCATTTTTGTTACGCCGGATAAAAACCGATGTAGAGAAGAGTCTGCctcctaagaaggaaataaagattTACTTGGGCCTGAGTAAAATGCAACGAGAATGGTATACAAAAATTCTGATGAAAGATATTGATGTCTTAAACTCTTCTGGCAAGATGGACAAGATGCGACTCTTGAATATTCTGATGCAGCTCCGAAAGTGTTGTAATCATCCTTATCTGTTTGATGGAGCAGAGCCTGGTCCACCTTATACGACAGATGAGCACATTGTCGGCAATAGTGGTAAAATGGTCGCTCTGGATAAGCTATTGGCGAGAATTAAAGAACAGGGATCAAGAGTTCTCATCTTTAGCCAGATGACTCGACTGTTAGACATTTTGGAGGATTATTGTATGTGGCGTGGTTATGAGTATTCTCGACTGGATGGACAAACCCCACATGAAGAAAGAGAGgaagcgATAGATGCCTTCAATGCTCCAAATAGCAGCAAATTCATCTTTATGCTGAGTACTAGGGCTGGAGGACTCGGAATTAACTTGGCAAGTGCTGATGTGGTCATCCTATATGATTCAGACTGGAATCCACAGGTTGATTTACAAGCTATGGATCGGGCACATCGCATTGGTCAGAAGAAGCCAGTACGAGTCTTCCGTCTCATTACAGACAACACAGTGGAAGAGAGGATTGTAGAAAGAGCTGAGATAAAACTGAGACTTGATTCAATTGTTATACAGCAAGGAAGACTCATTGACCAACAATCTAACAAGCTGGCAAAAGAGGAAATGCTACAAATGATCCGTCATGGAGCTACACATGTTTTTGCCTGTAAAGAAAGTGAGCTGACAGATGAGGACATTGTAACTATtctggaaagaggagaaaagaagACTGCAGAGATGAATGAACGCATGCAGAAAATGGGAGAGTCATCTCTAAGAAATTTTAGAATGGACCTTGAACAAAGTTTGTACAAGTTTGAAGGAGAAGattacagagaaaaacaaaagCTGGGTACAGTGGAATGGATTGAACCTCCTAAACGAGAACGCAAAGCCAACTATGCAGTGGATGCCTACTTTAGAGAGGCTTTACGTGTCAGCGAGCCAAAGATCCCAAAGGCTCCTCGGCCTCCAAAACAGCCAAATGTTCaagattttcaattttttccaccGCGCTTATTTGAGCTCCTGGAAAAGGAAATTCTTTATTATCGGAAGACTATAGGTTACAAGGTCCCAAGAAATCCTGAGATCCCCAACCCAGCTATAGCTCAAAGAGAAGAGCAAAAAAAGATTGATGGAGCGGAACCTCTTACACCACAAGAGACTGAAGAGAAGGATAAACTTCTCACACAAGGTTTCACAAACTGGACTAAGCGAGATTTTAACCAGTTTATTAAAGCTAATGAGAAGTATGGGAGAGATGACATTGATAATATAGCTCGAGAGGTGGAGGGCAAGTCCCCTGAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAACGCTGCAATGAATTACAGGACATTGAGAAAATTATGGCTCAAATTGAACGTGGAGAAGCAAGAATTCAGCGAAGGATCAGTATTAAGAAAGCACTGGATGCCAAAATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGTATTCAGTATGGAACCAGTAAAGGAAAGAACTATACTGAAGAGGAAGACAGATTCTTGATCTGTATGTTACACAAAATGGGTTTTGACAGagaaaatgtatatgaagaattAAGGCAGTGTGTACGGAATGCTCCCCAGTTTAGATTTGACTGGTTCATCAAGTCGAGAACTGCCATGgaATTTCAGAGACGCTGTAATACTTTGATTTCAttgattgaaaaagaaaatatggaaattgaggaaagagagagagcagaaaagaAGAAACGGGCAACTAAAACTCCAATGGTAAAATTTTCAGCATTTTCCTAACTTTTAGGTAGATctcattttttttacataattaCAAATGTTTATACTATGTTTGATTCTGGGTTTTATGAAATGCTAATTTGTTTTAGATCAAAGAAGAATCACATCACAAACGTACTTCTCTTTTTGTTTGAAGAATATGTGGTTAGGAATTCCCTTGTTACAAAACTCAGTATTTAAGAAATTCCTCGCAAATTTAAGCAGAGGCATAATACAAGTGAGATCCTATGAATTGAGACTAGGTCGCCGTGGGGACAGCGGAAGGTTAGAGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTTTGATCTTTGTGGAACTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGTTCACTGCTGGataaaaatgtgattttaatCCTGTTGGGTTGCTGTGTATATCAATGATTCAAAGTATTCTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTCTGTTGTAAGACAAAACTTTTTTGTGCTACTAAGAGATATGATGCCAAGTATCATCTGTTATCAGTTGTAAAATACATCCTGATTTCAGAGGTGCTAATGGGGAAAAGAAATGTGCATCATAGAAGATATGAAATATGGTGTGTTAACATTTACCTTAACGTTATTAAATAACACTCACAAATAAACATTTCCTCAGAAACTTTAAATATTAAGTAGTTCTTTAAGATAAAAGTACATTTATAAGCCATGTGTAAGTAGATACTTGATGACTATTTTTGATGgatattttatgtcttttcataaaaagaaacacctttaaaagttattttacatTGGGTTATATAGTTTGTTGGGCTATATAGAGCATTAACTGTGAGTCTAACATTGAAGTGAATATTCATGTTAAAAATTTTAATGCATTTACATCCTAGATTTAACATTGTTGGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTTAgtcacagaaaagaaaagcagagtcaGCTACTGAGAGCTCTGGAAGGAAGGATGTCAAGAAGGTGAAATCCTAAAGCCtagaaataaagttttaaatgGGAAACTGCTATTTTCTTGTCCCCATCTTCAAATGCTAATTACTACTTCCAGTGTATTCATGGtactctaaggaaaaaaaaaaggaatactctttggttttgatttcttgcatattttatatattttacaatgCTTTCTACCTGAAATGTGTAGCTTTCTATTTTATGcattctagtattttctgtactGTATTTTGTGCATTTCATGTCTTCATCAAATTCCTCTCAGTCCTTGTTTTTTTGAAGCTTGTGCTGAGGTTTTAGCTTTTCTATGTTTTCTATGCCGCTGCTTTGAAAGAGAACCTAGATTCTATAGCTGTATTATTGTTGTTTCAGACTTTACATTTATATGGCTGTGGACAAAATGAATTAAAACGATTTGAGGAGAAAGACTTTCTCACTtctttgttgctttcttttctatggagtctgggtttgtgtgtgtgtaactgcatACTGTGATTAGCATAATCATTGTTTCTTTGAGGTCATCTACATACTTTTTCCTAAGGAAATAAAgggtaagaaagaaaaaatcttaaaaataaacccTAATATTTGATACTGTGTTTGCTGTCAGTGTGCGTTACATTTAAATTATTCTCTAAATATTCAAGTGggaaaaatataataaaggactgtctataagaaatat