Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rnf111
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ring finger 111
Also known as ARK|Arkadia
Coordinate chr9:70332706-70411122
Strand -
Gene summary Enables ubiquitin protein ligase activity. Involved in positive regulation of transcription, DNA-templated. Acts upstream of or within several processes, including cellular protein metabolic process; positive regulation of protein ubiquitination; and positive regulation of transforming growth factor beta receptor signaling pathway. Located in cytoplasm and nucleus. Part of protein-containing complex. Is expressed in several structures, including heart; nervous system; testis; and urinary system. Orthologous to human RNF111 (ring finger protein 111). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rnf111

Retroname Coord Strand Genomic Region ENSG
Rnf111P2 chr3:6229676-6233070 - Intergenic
ENSMUSG00000103733 UCSC
Rnf111P1 chr3:134672562-134674113 + Intergenic
ENSMUSG00000106569 UCSC

Expression

Transcript Sequences

>NM_033604.3
GGTGTCGCGCTCGCGCAGTCGGGGAGGGCCGGCCCAGGCTGCGGCGGCGGCGACGGCGATGGTGGCGGGGCGCTGGTGCTGCGCGGCGTAAGGCACGCCGGCCGTTCAGGGTCGCGAGCGCGCGTGGGCCGCGATCGGGTGCTCGGAGCCGGGTCCAGCCGAGCCAGGCTCAGCCTCACGCTCCGCGGCGGCGGTGTTGACAGACGCCCTCCTGAGGAGAGCCGCCCGGCCCGCCTCAGCCTCACCCGGCCGAGCGCTGTTCCCCAGCCCCGCGCCAGCGAGTCCGGGACCTGGCCGCACGGGGCCTGCGGACTCGGATAATTGATCGGAGTCAGCAGTGGTGCGGTGGAAATATCGGTTTTTGTTCTGGAGAAATAGAGGCCTTCCCTGAAGTTTCCCATGTCTCAATGGACTCCTGAATTTAACGAGCTCTACACCCTAAAAGTGGCTATGAAGAGTGGGACTCCTGATGCGCCCACTACACAGGAGAGTCTGAAGGCGGTCCTTCTGCACCCACAGCCCCTAGGGGCCACCAAGAGCTTCCCTGCAGAAGTGGAGATGATTAATAGCAAAGTGGGGAATGAATTCTCTCATCTGTGTGATGATTCTCAAAAACAAGAGAAGGACATGACTGGCAACcagcaagaacaagaaaaaagtgGTGTTGTGAGAAAAAAGCGCAAAAGCCAGCAGGCTGGCCCCTCATATGTGCAGAACTGTGtcaaagaaaatcaggaaatCCTAGGGCGCAGACAACAGCTAGAGACACCGAGTGATGAGGATAATGACTCTTCCTTAAGTGAGTGTCTGTCTTCTCCCTCATCTAGTCTCCATTTTGGGGGCTCTGATACAGTGACTTCAGATGAGGATAAAGAAGTCTCGGTGAGACATACCCAGCCTGTTCTGAGTGCTAAAAGTAGAAGTCACAGTGCAAGGTCTCACAAGTGGCCTCGAACTGAGGCAGATCCTGTGCCAAGTTTGTTAATGAAAAGACCTTGTTTTCATGGCAGTGCACTAAGGAGAGTCACATGCAGAAAGAGGCTGGTGAAGAGCAGCTCCTCGCAGAGGacacagaagcagaaggagaggATGCTAGTGCAGAGGAAGAAGCGGGAGGCGCTAGCTCAGAGGAAGTATGctcttctctccagctccagtagCTCCAGTGAGAATGACCTCAGCAGCGATTCCTCGTCCAGCTCCTCCACCGATGGAGAAGAGGACCTGTGTGCATCTGCCAGTGAGAACCCCAGCAACCCCGCTGCTCCCTCAGGAAGTATTGATGAAGATGTTGTGGTGATAGAAGCCTCCTTCACTCCCCAGGTCACTGCCAATGAAGAAATTAATGTTACCTCAACTGACAGTGAAGTGGAGATTGTTACAGTTGGAGAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCAGATCTCATTGGAGCCAAGGTTCAAGTTCGCATACAGGACGGCCACAGGAGTCTCGAAACCGCAGTAGGATCTCTACTGTTATACAGCCCCTGAGGCAGAATGCAGCAGAAGTTGTGGACCTTACTGTTGATGAAGATGaACCTACTATAGTACCAACCACTTCTGCTAGAATGGACTCACAAACTACTAGTGCTTCCATTAACAATTCAAATCCATCTACCTCTGAGCAAGCCTCTGATACTACTTCAACTGTGGCCAGTAGCCAGCCTTCCACAGTGTCAGAGACTGAAGCTACTCTTACAAGCAATAGTGCAACTGGTTCTTCTGTGGGCGATGACGTGAGGAGAACTGCATCTAGTGCTGTCCCAGAAAGTGGTCCTCCTGCAATGCCAAGGCTACCTTCTTGCTGCCCCCAGCACTCACCATGTGGAGGGACATCACAGAGCCATCATGCATTAGCACACCCACACTCAAGTTGTTTTCAGCAGCATGGCCACCATTTtcagcatcaccaccatcaccaccatacTCCCCACCCAGCTGTCCCAGTTTCTCCTTCCTTCAGTGACCCTGCTTGCCCAGTGGAAAGACCTCAAGTACAGGCGCCTTGTGGAGCAAATAGCAGCTCTGGTTCCAGCTACCATGACCAGCAGGCATTGCCAGTCGATCTGAGCAACAGTGCTCTCAGGACTCATGGAAGTGGGGGTTTCCATGGTGCATCTGCTTTTGACCCCTGCTGCCCTGTCACATCTTCCCGGGCTGCAGTCTTTGGCCATCAGGCTGCTGCTGCCCCGACTCAGCCATTATCAATAGATGGCTATGGCTCCAGCATGGttgcccagccccagccccagccccctccACAGCCTTCTCTTTCGTCATGTCGGCACTACATGCCACCTCCGTATGCTTCCTTGACAAGACCACTGCACCATCAAGCCTCAGCTTGCCATCACTCTCATGGAAATGCCCCTCCCCAGACTCAGCCTCCCCCTCAAGTGGATTACGTGATTCCGCATCCTGTCCATGCTTTCCATTCTCAGATATCTTCTCATGCAGCATCTCACCCTGTGGCACCACCGCCGCCAACACATTTAGGCAGTACAGCGGCACCCATCCCTCAGCATCTTCCTCCTGCTCACCAGCCAATTTCACACCATATTCCAGCCCCAGCACCTTCAGCCCAGAGACTGCACCCTCATGAAGTGATGCAGAGGATGGAAGTTCAGAGGAGGAGGATGATGCAGCATCCAACGCGGGCACATGAACGGCCCCCGCCCCATCCACATAGGATGCACCCAAACTATGGCCATGGGCATCATATTCATGTGCCTCAAACCAtgtcttcacatcctcgccaggcTCCAGAGAGAACTGCCTGGGAACTGGGGATTGAAGCTGGAGTAACTGCAGCTACCTACACACCTGGTGCTCTGCACCCTCACCTGGCCCATTACCACGCCCCGCCTCGACTTCATCACCTCCAGTTAGGAGCACTTCCTTTAATGGTTCCTGACATGGCAGGCTATCCTCACATCCGTTATATTTCTTCAGGATTGGATGGAGCATCATTCAGAGGTCCTTTTAGGGGCAATTTTGAgGAATTGATTCATCTGGAAGAAAGATTAGGAAATGTCAATCGTGGAGCCTCCCAGGGAACAATTGAAAGATGCACATAtccacataaatataaaaagGTAACAACTGATTGGTTCTCACAGAGGAAACTGCACTGCAAACAAGATGGGGAAGAAGGGACTGAGGAAGACACAGAGGAAAAATGTACTATCTGTTTGTCTATTTTAGAGGAAGGTGAAGATGTGAGGCGCCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGATCAGTGGCTGATCACCAATAAGAAGTGCCCCATATGCAGAGTGGACATCGAGGCCCAGCTGCCAAGTGAAAGTTGACATTGTGTTTCAGAACTCTTGGTGTCCCTCTCATTCCTATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCAGATCTGGAAGCCTTGAACTCGGAGTGCTGACTCTGCTACATGGTACAGCTACCGCTAGACCTACAACTTATGTACACAGTTGATTTTGATGTATttataaaagctttttttttccctagatttGACATTACTTCCTGTatcattttactgtatttttgcATGATTCCTTGTATTGCATTTCTTTGCACATATTATGGGCTTGTGACCCTAAACTTGCAGGCAAGATTAGCTGCTTTAGTAAGTAGTATTTtgtggtcttttttttgttttttgggtttttttgtttttgtttttgttttgtttttgttttttgttttttacatagtACCTTGAAAATTATGAATTTTTTATCCATTACTAACCTTTAATTTAATCAATCATGTACTTTAGTTTAATGTATAAAGATTTTCTAGGAAATGATATTGTGTATTAAGacattccttaattaaattaggACAAAATGGCTGCTGTATATTTACAATATGGAATTCTGAGTTAAGTACCGCCCTTCATACTGGGAACAGAATGTATGTAACCCATGTCAATCAGATGCAGGTGGTACCCACACGACCAGAGTGATCAATAGGAATTTTCTTGGTGTTCCTTTCTTCCAGCACAGTGCAAGATAGAGTTGCTGTTGATGCCATATGTTTAGACTGCTGTTCTGACCCTATTTatctttctctctgccatttggAACTTTATTCCCTAACCcaggttttgctgctgtgaaacaGCGTTGATGAACACTAAATATTAATCTGAGATAGCTGGATTGTATATACTTGCAGATTTAAAAATATAGGGAAATTGAAAAAGACATGTAGAATTTTGTTAGGTCTTCTGCTAAGCACGAATAAGATATCTGCttacattaatttttataaagtCATTCAGTCAGAATTTAGGATTCAGTCATTGGCAGGTATCTATGCATTCGTAGAACTTCTAAGGGTCCCAGGATCacttttaagggattttttttttatagtttaaaTAAAGTCAGCTGAATCTACAtgtctcttgttttatttctctctAAACTTGAAAACAGTAAATCTGCAGATACTGTGAGGCACAGATTATATTGTCAAGCTACTGTTGCTATGGTTATAGACACCCACTTCAGACATTACCAAGAGTCGATCACtgacttaaaaattttaatttctatagTTAAGATTTACAACATAATATAGAGTGAAAGTTAACATACTAACATTTCTCCTTTGGAGGAAGTTTTAATCCACTTCAGGATGCATATTAGCAAGATACTTTCATATACAGGATAgcctaattttatttgtttaaatatgcTTAATATGCCCAAGATTGCAAATGCATCCAGTCAGTAATACCACTGTCTGTATGTGGAAGACATGTTCCCATGGATCATATGTGAAGATGTCAATAAGCTTGCATTAAGCCACCTGCTTTGTAAGTGGATTGATTAATAAATAACTTATATTTCTATTGTC