Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rnf138
Plot displaying the genomic locations of a parental gene (in chr18) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ring finger protein 138
Also known as Rsd4|Trif
Coordinate chr18:15146925-15167361
Strand -
Gene summary Predicted to enable protein kinase binding activity; single-stranded DNA binding activity; and ubiquitin protein ligase activity. Predicted to be involved in DNA double-strand break processing involved in repair via single-strand annealing; double-strand break repair via homologous recombination; and protein ubiquitination. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be active in site of double-strand break. Orthologous to human RNF138 (ring finger protein 138). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rnf138

Retroname Coord Strand Genomic Region ENSG
Rnf138P1 chr6:101409099-101411399 + Intragenic
N/A UCSC
Rnf138P2 chr11:66636227-66636478 + Intragenic
N/A UCSC
Rnf138P3 chr13:59250087-59250587 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_053588.2
GCCACCTCGGCTCCTGCGGGCGCTGTCGCCTCTCCCGCCCACCCCTCGCCATGTCCGAGGAGCTTTCGGCGGACACGTCCTACACGGAAGATGATTTCTACTGCCCAGTCTGTCAGGAGGTGCTCAAGACGCCGGTGCGGACCGCGGCCTGTCAGCACATTAAATTTTATCGCATGAGACATCATTACAAATCTTGTAAGAAGTATCAGGATGAATATGGTGTCTCTTCTGTCATTCCAAATGTTAAGATTTCTCAAGATTCAGTAAGGAGCAGTAATAGGAGTGAAACATCTGCATCTGATAACACAGAAACTTATCAAGAGGATACAAGTTCTTCTGGGCATCCCACCTTTAAGTGTCCCTTATGTCAAGAGTCAAATTTCACCAGACAACGTTTATTGGATCACTGTAATAGTAACCACCTGTTTCAGATAGTTCCTGTGAATCTTCAGCTAGATGAGGAAACCCAATATCAAACTGCTGTGGAAGAGTCTTTCCAAGTTAACATGTGATGTGTGTAGACATCTCTGCCTCCTTGCTACCTACAAGTGCCATCTTTAAGGAGAAGACATGAAGTCACCGTTTTCAGTAATTTGCTGTGCATATTAATAAAAATAATAATTCAGTCTACTGTATTAGGTTTTTAATTGAAAATAAAGGTGGGCCACCCTAATTCCATTCTCTAGACAGTTACTTTAACAGCATGGAAAGGGTCGTATTTCACTTGTATGGTGAAAAGGGAATCTGTTGTCTTTTTCTTTCTTGTATTACATATTCTGAATGTTTAAGTTGTTTTTGATAATTTGGTACAGTTCCTTCTATTTAGTACAGAGATAACTGCAAATTCTGAACGATGTGATTCCTATAAAACTAATAAACCTGAGCCATTTGTCAGAGCTGCAGAGTGGAAACTTGAAGTGCAAAGGGGAGGGGGGTCCAAAGGGGTTTTTCGCCAGCAATAGATCCTAGCTGAGGATACAATAAGAAAATTGTATTTATATAATGTTTAGTATTTTTGAAGACTAGTGAGATTTCTTTAATAATTTTGACTCTGAAAGTGTATTGTACAAATGTTTCTTCTTTTGTGGTTAGAAGAAACAAGAGAAAAAGTTTTCGTTGGTGGTGTTTGTTATTTCAATCTAGGTTGAGTAATTTGTAAGCCCAAATATGTTATATGACAGTTCTTTGTAGTCAGTGTTTCTCACTTGCTGATGAAACTTTTTAGTCAGTGAATGATACATTACACTTAAATTAGTTTTTTAAAAATCCAAAGTTGCAGATGTATGTGGATATGTACATAGACTTTTGCATGTATATATACACATATATATCCTTGCCTAGAGTTTGTCAGGTTATGTATAGAATTTCTATTAAAGAGTTTTAATAATGGACAGCAATATAGGATTGAAGTATTTATCTCATTTGTTTAAAACTTTGTATGTTACCACGTTTTTAAAACAGTAAACCAAATACTACGTGGTACAGTTGGCTGTTATTACACCTGAAAAAATGTGTTAAATGGTGCTCATTTGTTCTTTTTGAAAATGATTCATAGCTGATGTGTGGTGAGATTTTACCAGCCTCTGTTTCACTACATTTTAGTCAAAACCGAGTTCTTAATCTTTGGTATAAGGTAATGTAGAGAAGGCCAAGTCACAGAGTGCAGGGTGAAGAGGGAATTCTGACATTCCACGCTAACATAACACTGTTACGCTTTCTTTAAAATAACTAAACGCAAAAGAAAATCTCTGAAGTAGTTTGCTGCTAATATATACATATATTGTAAAAAAGGTATATTTTGATTTTCTTAATACCCTTGTTGACTTTTCTACAATGAACATTTTTTTTAACTTGATTTAATAAAAATGTTAATTTTGGATGTGCAGTTTTGTAAAAACCTTTTTCAGTTAAACAGTAATGACTTTATTTATGTTTAGTAATGTAGACTCACAACAAGCCATACATCTTAATACCTTTTTATTCCCTGTCATTTCTTGAGCGTGACGTTTACTGTGTTCTCTAGCACTTTGAGTTGACATACAAGAGTGTAATCCTAGGAACATCTATATAATGAACTCTTTAAAGGGAGACTTCTCTCCACAGAAGCAATAACCTGGATGCTTTTAAAGTTAAATTTAGCCAGTGCGTTGCTAAATCTCCCTGGGATGTACAAACTTAAAGGGAAACTTGTACTAGAGATCATTTTGGAATCCTGTTTGAAGTCTTGTGGATGAGTTAAATATTAATATATTTATAGCTTTTTCATGAGAATTATCTCTTTTGCATTAGTAACTTATTAAAAATGGAAAAAAGTTTTAAATTCTTTTTTGTCAGTAGATTAAGAACAAGGGTTGACTTTACAGTTTAATTCATGGGGAAGAAGCCTCAGTGGTGGTGGTTAGTAGCCGCCAGCATGAAGGAGGAAGCTGTAGCAGTGTGCTGACGCATCGCTTTCACGGTACCACTTAGGAAAGCCATTTCTCCTTCAACTTAGTTTAGTCTTTGTCCTTCAATACAGTGTTCATTGAGATGTATTGCTTTATTTTTCAATTAAAAATGGTTTTCTCCTA