Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps27
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S27
Also known as -
Coordinate chr2:189572175-189573280
Strand -
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in rRNA processing and ribosomal small subunit assembly. Part of cytosolic small ribosomal subunit. Is active in GABA-ergic synapse; glutamatergic synapse; and presynapse. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 17. Orthologous to human RPS27 (ribosomal protein S27). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps27

Retroname Coord Strand Genomic Region ENSG
Rps27P1 chr1:128749646-128749978 + Intergenic
N/A UCSC
Rps27P2 chr1:204092136-204092464 + Intragenic
N/A UCSC
Rps27P3 chr1:221290458-221290798 + Intergenic
N/A UCSC
Rps27P4 chr1:27613391-27613677 + Intergenic
N/A UCSC
Rps27P5 chr2:220833009-220833303 - Intergenic
N/A UCSC
Rps27P6 chr4:140815581-140815828 + Intergenic
N/A UCSC
Rps27P7 chr4:158579474-158579619 - Intergenic
N/A UCSC
Rps27P8 chr4:41314623-41314882 + Intergenic
N/A UCSC
Rps27P9 chr5:109906572-109906767 - Intergenic
N/A UCSC
Rps27P10 chr5:128079066-128079345 - Intergenic
N/A UCSC
Rps27P11 chr5:169635797-169636135 + Intragenic
N/A UCSC
Rps27P12 chr6:23477281-23477479 + Intergenic
N/A UCSC
Rps27P13 chr8:128130650-128130993 + Intergenic
N/A UCSC
Rps27P14 chr9:10737547-10737863 - Intergenic
N/A UCSC
Rps27P15 chr10:59387650-59387985 - Intragenic
N/A UCSC
Rps27P16 chr10:70506659-70506996 - Intergenic
N/A UCSC
Rps27P17 chr12:17866380-17866714 - Intergenic
N/A UCSC
Rps27P18 chr12:31736789-31737260 - Intergenic
N/A UCSC
Rps27P19 chr12:40669177-40669482 + Intergenic
N/A UCSC
Rps27P20 chr13:72669708-72669993 + Intergenic
N/A UCSC
Rps27P21 chr13:89218973-89219225 + Intergenic
N/A UCSC
Rps27P22 chr14:104396605-104396913 - Intergenic
N/A UCSC
Rps27P23 chr15:15511678-15511982 + Intragenic
N/A UCSC
Rps27P24 chr16:16838115-16838360 - Intragenic
N/A UCSC
Rps27P25 chr16:2788818-2789003 - Intragenic
N/A UCSC
Rps27P26 chr16:46468982-46469322 + Intragenic
N/A UCSC
Rps27P27 chr17:54441475-54441787 + Intergenic
N/A UCSC
Rps27P28 chr18:15274902-15275126 + Intragenic
N/A UCSC
Rps27P29 chr20:11753099-11753228 - Intragenic
N/A UCSC
Rps27P30 chrX:10800938-10801214 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_053597.3
CCTTTCCGGCGGTGACGACCTCCCTACGAGAACATGCCTCTCGCAAAGGATCTCCTTCATCCTTCTCCAGAAGAGGAGAAGAGGAAACACAAGAAAAAGCGCCTGGTGCAGAGCCCCAATTCCTACTTTATGGATGTGAAATGCCCAGGATGCTATAAAATCACCACGGTCTTTAGCCATGCACAAACGGTAGTCTTGTGTGTTGGCTGCTCCACTGTACTCTGTCAGCCTACAGGTGGAAAAGCAAGGCTGACAGAAGGATGCTCCTTCAGGAGGAAGCAGCACTGAAAGCCCCTGATTCAAGATGAGTGGGAACGTTCCCAATAAACACATTTTGGATATA