Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Hmgb2
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name high mobility group box 2
Also known as HMG-2|Hmg2
Coordinate chr8:57964877-57969033
Strand +
Gene summary Enables cis-regulatory region sequence-specific DNA binding activity and protein domain specific binding activity. Involved in several processes, including regulation of gene expression; regulation of stem cell proliferation; and response to lipopolysaccharide. Acts upstream of or within several processes, including male gonad development; negative regulation of extrinsic apoptotic signaling pathway via death domain receptors; and spermatid nucleus differentiation. Located in several cellular components, including chromatin; extracellular space; and nucleus. Is expressed in several structures, including alimentary system; brain; branchial arch; retina; and urinary system. Orthologous to human HMGB2 (high mobility group box 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Hmgb2

Retroname Coord Strand Genomic Region ENSG
Hmgb2P7 chr10:25708636-25709596 - Intergenic
ENSMUSG00000112691 UCSC
Hmgb2P9 chr11:104819262-104819999 + Intragenic
ENSMUSG00000080694 UCSC
Hmgb2P5 chr6:81817305-81818346 - Intergenic
ENSMUSG00000108202 UCSC
Hmgb2P13 chr18:90548936-90550017 + Intragenic
Intragenic
ENSMUSG00000117747 UCSC
Hmgb2P10 chr12:115139594-115140213 + Intergenic
ENSMUSG00000103665 UCSC
Hmgb2P4 chr6:67228639-67229914 - Intergenic
ENSMUSG00000108292 UCSC
Hmgb2P15 chrX:54920501-54920683 - Intragenic
N/A UCSC
Hmgb2P8 chr10:51994863-51995605 - Intragenic
ENSMUSG00000093563 UCSC
Hmgb2P6 chr9:15594196-15595151 + Intergenic
ENSMUSG00000110786 UCSC
Hmgb2P11 chr16:52799094-52802107 + Intergenic
N/A UCSC
Hmgb2P12 chr18:88850386-88850602 - Intergenic
ENSMUSG00000117948 UCSC
Hmgb2P1 chr2:132520657-132521265 + Intergenic
ENSMUSG00000081662 UCSC
Hmgb2P2 chr4:145455783-145456942 - Intergenic
ENSMUSG00000084279 UCSC
Hmgb2P3 chr4:146160232-146161393 - Intergenic
ENSMUSG00000081671 UCSC
Hmgb2P14 chrX:20257837-20258836 + Intragenic
ENSMUSG00000082855 UCSC

Expression

Transcript Sequences

>NM_001363443.1
GGAGGGAGGTGTGGCCCGCGACTGGTCTGGTCAAGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGCGAGAAACCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAGCAGGTAAGACAGACGCCGCGCCGTCGTCATGGGCAAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGcgaggagcacaagaagaagcatCCCGACTCGTCGGTGAACTTCGCCGAGTTCTCCAAGAAATGCTCCGAGAGATggaagACCATGTCTGCAAAGGAAAAGTCCAAGTTTGAAGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGggataagaaaggaaagaaaaaagacccCAATGCTCCGAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGCCTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAAAGAAGAAGAACGAaccagaagatgaggaggaggaagaagaggaggaagaggaggaagatgacgaggaagaagaggaggatgaagaataAGTGGCTGTCCTAAAGTGTGGAGTATATTTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTagagaaaatactttttaagaaGAGTTTGTAGCTTTTTCAGGGGCTACAACTACAGTTAGATTTAAAGCTTTTGATGTTGaatgtttctaaatatttaatggtttctttaatttcttatgctagcaaaaaaaaaacttcataggAATTTGTATTACcagtaaaaattttttttaggatgttgcatttttttgtttttttttaaatttgtaataaaataatgtatattaaTTTGCATTGTGTTTGTATTAATTTTTCCTTAAACAGATACAGGCATGTTAGTCTTTTTACACAGTTAAGTTTTGTGTTAACCATTTACTAATTTGCTTCTCTGATTTTTGTGGTTAGAAGGGCCAATTTCTTTTAATGACCACAAGCTAACATATTAGCAACAGGTTAAAGCGTTAAGGACATACTGCCTTGATTTCCAGAGCAAATAGacttaaaaaaactttaaaagttcTGTGATTGTACAAATAGTAAGTCTAAAAGATTATCCACTCAAATTTGGAGTCGGGGTatgatcttttaaatttttaggcTTTGGGTAGTTTAGTATACTAAAATATTTTGGATAATGTACTAGATACCCAGGTGTGgggatttaattattttgatTCACTTTTTTATCAGTATGGATGTGAGATATGGACAGGTCTTAGCTTATAAGTCTTAGCTTGTACCAAAATTGGAAGTTACGAGATGAGGTGAGTTAAATGTGTTGGGAAACTTGTGTAGATGTTGAAAGTAGTTATaccaggctgggtgtggtggcaggtACATGCAATCCCAGAGTGGAAGGTAGAGAGAGGGCAGGAGGGTTGGAGTTAGGACACCACCACCAAAGTACATGCTTCAATGGTATTTAAAATGTtaaggaaattatatatatatatcagatagtTACATCCCTTTTCAACTTTGGATTTTTCAAAACTACTAACAAATCAAGAATGAGCATAATCATATATTTATGACATAAGTATTACACAAATGAATTCTTAGAGCACTGACTTTGTTAAATGTCTGCATCTTCTCATGTTGAATAGGTTGTAATTTAACTAGTTCCCTAAAAATCTCAACAGATttcctgaggccagcctgtctacagagttCTAAGatggccaaggctacacagaagtTCTTGGCATCACTGTCTTTCTTGATAGCAGCCTACCCAACTTTTAAGAATATTCCTGTGACTATTTATATGTGAAAAAAGTCCTAGAAGGAATAACAGCTAAAAGGTATAGATAATACAGAATTTGCTACTTAGAATAATctaaacctttatttttatttaaattttattttatttatttattttgagatggtttctctgtatagccctggctgtcctagatcaggctggcctcgaactcagttatccgcctgcctctgcctcccaagtgctgggtttaaaggcgtgcaccaccactgcctggcttaaacctttactttttgtttctgacaatgctggagatagaacccagagccttatgcatgccaggcaagtgctgtaCCTCTGAGCTCACTTGAATGCCTTTGCTATTTTCTCCCAAACCTGTACTTGAAGTTTGTTAGAAAGCTACACTAAGTAATAGTATATAGTCTACACTAACCATACTAGCAGTTTTGTAGTTCCCATTTGATCGAAGTAATGGTTTTCAAATTTCAGTCTTTGTTATTCTGATGTATATCTCACGTGTATCATAttctaaaacaatatttttttatactt
>NM_001363444.1
GGAGGGAGGTGTGGCCCGCGACTGGTCTGGTCAAGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGCGAGAAACCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAGCAGACAGACGCCGCGCCGTCGTCATGGGCAAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGcgaggagcacaagaagaagcatCCCGACTCGTCGGTGAACTTCGCCGAGTTCTCCAAGAAATGCTCCGAGAGATggaagACCATGTCTGCAAAGGAAAAGTCCAAGTTTGAAGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGggataagaaaggaaagaaaaaagacccCAATGCTCCGAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGCCTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAAAGAAGAAGAACGAaccagaagatgaggaggaggaagaagaggaggaagaggaggaagatgacgaggaagaagaggaggatgaagaataAGTGGCTGTCCTAAAGTGTGGAGTATATTTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTagagaaaatactttttaagaaGAGTTTGTAGCTTTTTCAGGGGCTACAACTACAGTTAGATTTAAAGCTTTTGATGTTGaatgtttctaaatatttaatggtttctttaatttcttatgctagcaaaaaaaaaacttcataggAATTTGTATTACcagtaaaaattttttttaggatgttgcatttttttgtttttttttaaatttgtaataaaataatgtatattaaTTTGCATTGTGTTTGTATTAATTTTTCCTTAAACAGATACAGGCATGTTAGTCTTTTTACACAGTTAAGTTTTGTGTTAACCATTTACTAATTTGCTTCTCTGATTTTTGTGGTTAGAAGGGCCAATTTCTTTTAATGACCACAAGCTAACATATTAGCAACAGGTTAAAGCGTTAAGGACATACTGCCTTGATTTCCAGAGCAAATAGacttaaaaaaactttaaaagttcTGTGATTGTACAAATAGTAAGTCTAAAAGATTATCCACTCAAATTTGGAGTCGGGGTatgatcttttaaatttttaggcTTTGGGTAGTTTAGTATACTAAAATATTTTGGATAATGTACTAGATACCCAGGTGTGgggatttaattattttgatTCACTTTTTTATCAGTATGGATGTGAGATATGGACAGGTCTTAGCTTATAAGTCTTAGCTTGTACCAAAATTGGAAGTTACGAGATGAGGTGAGTTAAATGTGTTGGGAAACTTGTGTAGATGTTGAAAGTAGTTATaccaggctgggtgtggtggcaggtACATGCAATCCCAGAGTGGAAGGTAGAGAGAGGGCAGGAGGGTTGGAGTTAGGACACCACCACCAAAGTACATGCTTCAATGGTATTTAAAATGTtaaggaaattatatatatatatcagatagtTACATCCCTTTTCAACTTTGGATTTTTCAAAACTACTAACAAATCAAGAATGAGCATAATCATATATTTATGACATAAGTATTACACAAATGAATTCTTAGAGCACTGACTTTGTTAAATGTCTGCATCTTCTCATGTTGAATAGGTTGTAATTTAACTAGTTCCCTAAAAATCTCAACAGATttcctgaggccagcctgtctacagagttCTAAGatggccaaggctacacagaagtTCTTGGCATCACTGTCTTTCTTGATAGCAGCCTACCCAACTTTTAAGAATATTCCTGTGACTATTTATATGTGAAAAAAGTCCTAGAAGGAATAACAGCTAAAAGGTATAGATAATACAGAATTTGCTACTTAGAATAATctaaacctttatttttatttaaattttattttatttatttattttgagatggtttctctgtatagccctggctgtcctagatcaggctggcctcgaactcagttatccgcctgcctctgcctcccaagtgctgggtttaaaggcgtgcaccaccactgcctggcttaaacctttactttttgtttctgacaatgctggagatagaacccagagccttatgcatgccaggcaagtgctgtaCCTCTGAGCTCACTTGAATGCCTTTGCTATTTTCTCCCAAACCTGTACTTGAAGTTTGTTAGAAAGCTACACTAAGTAATAGTATATAGTCTACACTAACCATACTAGCAGTTTTGTAGTTCCCATTTGATCGAAGTAATGGTTTTCAAATTTCAGTCTTTGTTATTCTGATGTATATCTCACGTGTATCATAttctaaaacaatatttttttatactt
>NM_001363445.1
GGAGGGAGGTGTGGCCCGCGACTGGTCTGGTCAAGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGCGAGAAACCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAGCAGCCCCCTCCCCGCGGGTCCCCACCCCGGTCCCCGGTCCGGACACGGCTTTCTCCTCGGCAGGTAGACAGACGCCGCGCCGTCGTCATGGGCAAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGcgaggagcacaagaagaagcatCCCGACTCGTCGGTGAACTTCGCCGAGTTCTCCAAGAAATGCTCCGAGAGATggaagACCATGTCTGCAAAGGAAAAGTCCAAGTTTGAAGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGggataagaaaggaaagaaaaaagacccCAATGCTCCGAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGCCTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAAAGAAGAAGAACGAaccagaagatgaggaggaggaagaagaggaggaagaggaggaagatgacgaggaagaagaggaggatgaagaataAGTGGCTGTCCTAAAGTGTGGAGTATATTTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTagagaaaatactttttaagaaGAGTTTGTAGCTTTTTCAGGGGCTACAACTACAGTTAGATTTAAAGCTTTTGATGTTGaatgtttctaaatatttaatggtttctttaatttcttatgctagcaaaaaaaaaacttcataggAATTTGTATTACcagtaaaaattttttttaggatgttgcatttttttgtttttttttaaatttgtaataaaataatgtatattaaTTTGCATTGTGTTTGTATTAATTTTTCCTTAAACAGATACAGGCATGTTAGTCTTTTTACACAGTTAAGTTTTGTGTTAACCATTTACTAATTTGCTTCTCTGATTTTTGTGGTTAGAAGGGCCAATTTCTTTTAATGACCACAAGCTAACATATTAGCAACAGGTTAAAGCGTTAAGGACATACTGCCTTGATTTCCAGAGCAAATAGacttaaaaaaactttaaaagttcTGTGATTGTACAAATAGTAAGTCTAAAAGATTATCCACTCAAATTTGGAGTCGGGGTatgatcttttaaatttttaggcTTTGGGTAGTTTAGTATACTAAAATATTTTGGATAATGTACTAGATACCCAGGTGTGgggatttaattattttgatTCACTTTTTTATCAGTATGGATGTGAGATATGGACAGGTCTTAGCTTATAAGTCTTAGCTTGTACCAAAATTGGAAGTTACGAGATGAGGTGAGTTAAATGTGTTGGGAAACTTGTGTAGATGTTGAAAGTAGTTATaccaggctgggtgtggtggcaggtACATGCAATCCCAGAGTGGAAGGTAGAGAGAGGGCAGGAGGGTTGGAGTTAGGACACCACCACCAAAGTACATGCTTCAATGGTATTTAAAATGTtaaggaaattatatatatatatcagatagtTACATCCCTTTTCAACTTTGGATTTTTCAAAACTACTAACAAATCAAGAATGAGCATAATCATATATTTATGACATAAGTATTACACAAATGAATTCTTAGAGCACTGACTTTGTTAAATGTCTGCATCTTCTCATGTTGAATAGGTTGTAATTTAACTAGTTCCCTAAAAATCTCAACAGATttcctgaggccagcctgtctacagagttCTAAGatggccaaggctacacagaagtTCTTGGCATCACTGTCTTTCTTGATAGCAGCCTACCCAACTTTTAAGAATATTCCTGTGACTATTTATATGTGAAAAAAGTCCTAGAAGGAATAACAGCTAAAAGGTATAGATAATACAGAATTTGCTACTTAGAATAATctaaacctttatttttatttaaattttattttatttatttattttgagatggtttctctgtatagccctggctgtcctagatcaggctggcctcgaactcagttatccgcctgcctctgcctcccaagtgctgggtttaaaggcgtgcaccaccactgcctggcttaaacctttactttttgtttctgacaatgctggagatagaacccagagccttatgcatgccaggcaagtgctgtaCCTCTGAGCTCACTTGAATGCCTTTGCTATTTTCTCCCAAACCTGTACTTGAAGTTTGTTAGAAAGCTACACTAAGTAATAGTATATAGTCTACACTAACCATACTAGCAGTTTTGTAGTTCCCATTTGATCGAAGTAATGGTTTTCAAATTTCAGTCTTTGTTATTCTGATGTATATCTCACGTGTATCATAttctaaaacaatatttttttatactt
>NM_008252.3
GGAGGGAGGTGTGGCCCGCGACTGGTCTGGTCAAGTTGCCGTGGCGCGGAGAACTCTGCAAAACAAGAGGCTGGGGATTGCGTTAGCGAGAAACCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAGCAGGTAGACAGACGCCGCGCCGTCGTCATGGGCAAGGGTGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGcgaggagcacaagaagaagcatCCCGACTCGTCGGTGAACTTCGCCGAGTTCTCCAAGAAATGCTCCGAGAGATggaagACCATGTCTGCAAAGGAAAAGTCCAAGTTTGAAGATTTGGCCAAGAGCGACAAAGCTCGTTATGACAGGGAGATGAAGAACTATGTTCCTCCCAAAGGggataagaaaggaaagaaaaaagacccCAATGCTCCGAAGAGACCACCGTCTGCCTTCTTCCTGTTTTGCTCTGAAAATCGCCCAAAGATCAAAATTGAACACCCAGGCCTGTCTATTGGAGATACTGCGAAGAAACTGGGTGAGATGTGGTCTGAGCAATCTGCCAAAGATAAACAACCGTATGAGCAGAAAGCAGCTAAACTAAAGGAGAAGTATGAAAAGGATATTGCTGCATACCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGTCCTGGTAGGCCAACAGGCTCAAAGAAGAAGAACGAaccagaagatgaggaggaggaagaagaggaggaagaggaggaagatgacgaggaagaagaggaggatgaagaataAGTGGCTGTCCTAAAGTGTGGAGTATATTTGCTCAGGCAATTATTTTGCTAAGAATGTGAAATTCAAGTGCAGCTCAACATTAGCTTCAGTATAAAAACTGTACAGATTTTTGTATAGCTGATGAGATTCTTTGTagagaaaatactttttaagaaGAGTTTGTAGCTTTTTCAGGGGCTACAACTACAGTTAGATTTAAAGCTTTTGATGTTGaatgtttctaaatatttaatggtttctttaatttcttatgctagcaaaaaaaaaacttcataggAATTTGTATTACcagtaaaaattttttttaggatgttgcatttttttgtttttttttaaatttgtaataaaataatgtatattaaTTTGCATTGTGTTTGTATTAATTTTTCCTTAAACAGATACAGGCATGTTAGTCTTTTTACACAGTTAAGTTTTGTGTTAACCATTTACTAATTTGCTTCTCTGATTTTTGTGGTTAGAAGGGCCAATTTCTTTTAATGACCACAAGCTAACATATTAGCAACAGGTTAAAGCGTTAAGGACATACTGCCTTGATTTCCAGAGCAAATAGacttaaaaaaactttaaaagttcTGTGATTGTACAAATAGTAAGTCTAAAAGATTATCCACTCAAATTTGGAGTCGGGGTatgatcttttaaatttttaggcTTTGGGTAGTTTAGTATACTAAAATATTTTGGATAATGTACTAGATACCCAGGTGTGgggatttaattattttgatTCACTTTTTTATCAGTATGGATGTGAGATATGGACAGGTCTTAGCTTATAAGTCTTAGCTTGTACCAAAATTGGAAGTTACGAGATGAGGTGAGTTAAATGTGTTGGGAAACTTGTGTAGATGTTGAAAGTAGTTATaccaggctgggtgtggtggcaggtACATGCAATCCCAGAGTGGAAGGTAGAGAGAGGGCAGGAGGGTTGGAGTTAGGACACCACCACCAAAGTACATGCTTCAATGGTATTTAAAATGTtaaggaaattatatatatatatcagatagtTACATCCCTTTTCAACTTTGGATTTTTCAAAACTACTAACAAATCAAGAATGAGCATAATCATATATTTATGACATAAGTATTACACAAATGAATTCTTAGAGCACTGACTTTGTTAAATGTCTGCATCTTCTCATGTTGAATAGGTTGTAATTTAACTAGTTCCCTAAAAATCTCAACAGATttcctgaggccagcctgtctacagagttCTAAGatggccaaggctacacagaagtTCTTGGCATCACTGTCTTTCTTGATAGCAGCCTACCCAACTTTTAAGAATATTCCTGTGACTATTTATATGTGAAAAAAGTCCTAGAAGGAATAACAGCTAAAAGGTATAGATAATACAGAATTTGCTACTTAGAATAATctaaacctttatttttatttaaattttattttatttatttattttgagatggtttctctgtatagccctggctgtcctagatcaggctggcctcgaactcagttatccgcctgcctctgcctcccaagtgctgggtttaaaggcgtgcaccaccactgcctggcttaaacctttactttttgtttctgacaatgctggagatagaacccagagccttatgcatgccaggcaagtgctgtaCCTCTGAGCTCACTTGAATGCCTTTGCTATTTTCTCCCAAACCTGTACTTGAAGTTTGTTAGAAAGCTACACTAAGTAATAGTATATAGTCTACACTAACCATACTAGCAGTTTTGTAGTTCCCATTTGATCGAAGTAATGGTTTTCAAATTTCAGTCTTTGTTATTCTGATGTATATCTCACGTGTATCATAttctaaaacaatatttttttatactt