Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name B3galnt2
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
Also known as A930105D20Rik|D230016N13Rik
Coordinate chr13:14129059-14173688
Strand +
Gene summary Predicted to enable acetylgalactosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to act upstream of or within UDP-N-acetylgalactosamine metabolic process. Predicted to be located in endoplasmic reticulum. Predicted to be active in Golgi membrane. Is expressed in submandibular gland primordium. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A11. Orthologous to human B3GALNT2 (beta-1,3-N-acetylgalactosaminyltransferase 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from B3galnt2

Retroname Coord Strand Genomic Region ENSG
B3galnt2P1 chr7:11914641-11917176 - Intergenic
 ENSMUSG00000110082 UCSC
B3galnt2P2 chrX:102331078-102331267 - Intragenic
 ENSMUSG00000098023 UCSC

Expression

Transcript Sequences

>NM_001362404.1
AAGGAGAGAGCGGCGGAGACAACGCCAGGCGTGGGCGCGAACACTCCTGGTGGCACTCGGTGTTCTTAGGTCCCCTCGCTATTGGCCGGGACGCGGGAGAGCGCGGCGGGGGCGCGAGGTGGGAGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCTTGCGTGCTCGGGGCCGCGCTGCACCTCTGGCACCTCTGGCTCCGTTCCCCGCCGGACCCCCACAACACCGGGCCCAGCGCGGCAGATCAATCAGCCTTATTTCCTCACTGGAAATTTAGCCACTATGATGTGGTAGTTGGTGTGTTATCAGCTCGAAATAACCACGAACTTCGAAATGTGATAAGGAACACCTGGCTGAAGAATTTGCTGCATCATCCTACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCCCGTGGCTGTGAAGTGCCTGTGGAAGACAGGGAGGATCCTTACTCCTGCCGACTGCTCAACATCACCAATCCAGttttgaatcAAGAAATTGAGGCATTCAGCTTTCCTGAAGATGCCTCCTCATCTAGACTCTCTGAAGACCGAGTTGTCAGCGTGAGCTTCAGAGTTCTCTACCCAATCGTGATTACCAGTCTTGGAGTGTTCTACGATGCCAGTGATGTTGGTTTTCAAAGGAACATCACAGTCAAGTTGTATCAGACAGAGCAGGAGGAGGCCCTTTTCATCGCCCGATTCAGTCCTCCAAGTTGTGGCGTACAAGTGAACAAGCTCTGGTATAAGCCCGTGGAACAGTTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAAAGCCAAGATCTCCATGGCCTCGTGTCCAGAAACCTGCACAGAGTGACAGTGAATGATGGAGGGGGTGTTCTCAGAGTCCTTGCAGCTGGGGAAGGGGCACTGCCTCATGAATTCATGGAAGGTGTGGAGGGAGTTGCGGGTGGCTTTATCTACACTGTTCAGGAAGGTGATGCACTATTAAGAAGCCTTTATTCTCGGCCCCAGAGACTTGCAGATCACATACAGGATCTGCAGGTGGAAGATGCCTTACTGCAGGAGGAAAGCAGTGTCCATGACGACATTGTCTTCGTGGATGTTGTGGATACTTACCGGAATGTTCCTGCAAAATTACTGAACTTCTATAGATGGACTGTGGAATCCACCAGCTTCGATTTGCTGCTCAAGACAGATGACGACTGTTATATAGACTTAGAAGCTGTGTTTAATAGAATTGCTCAGAAGAATCTAGATGGGCCTAATTTTTGGTGGGGAAATTTCAGGTTGAATTGGGCAGTGGACAGAACCGGAAAATGGCAGGAGCTGGAATACCCGAGCCCGGCTTACCCTGCCTTTGCATGTGGGTCAGGGTATGTGATCTCCAAGGATATCGTTGACTGGCTGGCAGGCAACTCCAGAAGGTTAAAGACCTATCAGGGTGAAGATGTCAGCATGGGCATTTGGATGGCAGCCATAGGACCTAAAAGACACCAGGACAGCCTGTGGCTGTGTGAGAAAACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTACTCACCAGAAGAGCTGAGCAAACTCTGGGAACTGAAGGAGCTGTGTGGGGATCCTTGTCAGTGTGAAGCAAAAGTACGATGATCCCCAAACCCCAGGGTCTGACAACAGAAGTTCTGACACAGGAACTTTGAGAAGACGTGACAACAGTCCCTTTACCTTTTGAACTGTCATGGAGTCtgtcaaagaaaagaaacttttaaGTGACAACTACATGTAGAAACAGCTCAGGAGAGGCAGCCATTGATGGAAGGCTTGAGTCATTCTACCAGGTGATCTTTTAACAAAGTGGGAAATGGAGCCAGTGTTTGACCCAAGAGGTCTTGACAGTGAGGTGCCATACCATTTCAGTAGCATTTACTATTTCTTCCTCAATCGGAATAACCAGAAATAATTATCTCACCGAAGAGGACACAATCTAGGCCTTTGTGATAACTTCCTAAGGGGTTGCTGAAGTTCCCTGGAGTGGGGGCCTTGCGGGGCCCCTCCCAGCACGAGCATCCAGTCACCATCAGGATGTGCACACATGACCACTAGGTGTGGGAAAGGAACTCTGAAGAACAAATGCGCTGGTCCGTCAAGAACACACTAGGAATTTCTTTCCAAAGACAGGTTGTGgtatatatggatattttgaTTAAGAATATTAGTTTCTCTGAAGCTTTAGCTGAAAGTACAGCAATAGTGTGGTGTCCCACAATTATCACAATGTAGtcaattatttttctataaattgtTTTTATAAATGCTGTGTTTTTATGCAACTTGTGATAATAAATATTCTCTATTTTAGAATAAACTAGCCTTTTCCTATTTTTGACTCACTTC
>NM_178640.3
AAGGAGAGAGCGGCGGAGACAACGCCAGGCGTGGGCGCGAACACTCCTGGTGGCACTCGGTGTTCTTAGGTCCCCTCGCTATTGGCCGGGACGCGGGAGAGCGCGGCGGGGGCGCGAGGTGGGAGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCTTGCGTGCTCGGGGCCGCGCTGCACCTCTGGCACCTCTGGCTCCGTTCCCCGCCGGACCCCCACAACACCGGGCCCAGCGCGGCAGATCAATCAGCCTTATTTCCTCACTGGAAATTTAGCCACTATGATGTGGTAGTTGGTGTGTTATCAGCTCGAAATAACCACGAACTTCGAAATGTGATAAGGAACACCTGGCTGAAGAATTTGCTGCATCATCCTACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCCCGTGGCTGTGAAGTGCCTGTGGAAGACAGGGAGGATCCTTACTCCTGCCGACTGCTCAACATCACCAATCCAGttttgaatcAAGAAATTGAGGCATTCAGCTTTCCTGAAGATGCCTCCTCATCTAGACTCTCTGAAGACCGAGTTGTCAGCGTGAGCTTCAGAGTTCTCTACCCAATCGTGATTACCAGTCTTGGAGTGTTCTACGATGCCAGTGATGTTGGTTTTCAAAGGAACATCACAGTCAAGTTGTATCAGACAGAGCAGGAGGAGGCCCTTTTCATCGCCCGATTCAGTCCTCCAAGTTGTGGCGTACAAGTGAACAAGCTCTGGTATAAGCCCGTGGAACAGTTCATCTTACCAGAGAGCTTTGAAGGTACAATCGTGTGGGAAAGCCAAGATCTCCATGGCCTCGTGTCCAGAAACCTGCACAGAGTGACAGTGAATGATGGAGGGGGTGTTCTCAGAGTCCTTGCAGCTGGGGAAGGGGCACTGCCTCATGAATTCATGGAAGGTGTGGAGGGAGTTGCGGGTGGCTTTATCTACACTGTTCAGGAAGGTGATGCACTATTAAGAAGCCTTTATTCTCGGCCCCAGAGACTTGCAGATCACATACAGGATCTGCAGGTGGAAGATGCCTTACTGCAGGAGGAAAGCAGTGTCCATGACGACATTGTCTTCGTGGATGTTGTGGATACTTACCGGAATGTTCCTGCAAAATTACTGAACTTCTATAGATGGACTGTGGAATCCACCAGCTTCGATTTGCTGCTCAAGACAGATGACGACTGTTATATAGACTTAGAAGCTGTGTTTAATAGAATTGCTCAGAAGAATCTAGATGGGCCTAATTTTTGGTGGGGAAATTTCAGGTTGAATTGGGCAGTGGACAGAACCGGAAAATGGCAGGAGCTGGAATACCCGAGCCCGGCTTACCCTGCCTTTGCATGTGGGTCAGGGTATGTGATCTCCAAGGATATCGTTGACTGGCTGGCAGGCAACTCCAGAAGGTTAAAGACCTATCAGGGTGAAGATGTCAGCATGGGCATTTGGATGGCAGCCATAGGACCTAAAAGACACCAGGACAGCCTGTGGCTGTGTGAGAAAACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTACTCACCAGAAGAGCTGAGCAAACTCTGGGAACTGAAGGAGCTGTGTGGGGATCCTTGTCAGTGTGAAGCAAAAGTACGATGATCCCCAAACCCCAGGGTCTGTAAGTGCAAGGAAAGCCGTGGCTGGTATACCGTGAGCTGTAAGCAGTAGGGTATTACTAGTGTTTGCACAGATCGTAATCAATCAACTCATACGGTATCAtaagtttttatttataaatttaaagattatttataccaaattattttacaaaaaataTTGCTAACTTTTGATCACTTATACTAATTAGCAACTCATTACCATTTTTGGTTAAATGGCCAAATTCAGAAAATAACTCCATTTGAATCTCCAGCAGGGTTACAAAAAAGCTCTACAAAACTTAATTAGGCCAGAAAGAAACTACAAAGATGCTGTGTGGCACAGGGGCCACATATACCAAAGTCTGGGTTGCTGGAAATACCAGTTTGTGGATCTCTGATACAACCTGACCTTGAAAAGGAAATGTAAACTAAAGTTTGGTATCTTACTTTTAAAGATGTTTATCTACATACATATcatgttttcttttactgtttaaGTAAATCCTGAATGTCTTAGCTTGGTACTGAGACACACGCTCGCTAAACTGTTTTTGTGAGTAGAGTCAAAGTAAACACCTCAGGGTTCAGTGTCACAGGGAGGTGTAGGGGAAGGCACTACTCTGCCTTGCCTGATATGTTTACCTAAGCTTGCACAGGAGGTGGTGAGACGTGCGAGACAGGCTCAGTGTACGCATAGCATAGAGAAAGTATGTTACAGGTCTGAAGATGTGGTTCCTCAGCTTAAAGGACATTTCTCAGAATGACCAACCAAATCACTGTAgtgaactttttaaaagttaagtagCCCACAGCAGATGTTAACTGTGCTCAGATTTAGACTACTGTTTCTACTCCATGTTTACATCTTCACATAGTGAATGCAGTAAGGTGTGAAAACAGAAAGGGCAGAGAAATCAATAGTAATCAAAGCCTTTATTATTCTATTAATATACAACCAAATGGTCTTTTCCCAACAAAACATAACATCATTTGTGAGGGCAAAGGTTTTGTTTCTGGTGTATACATTCCAGTCGTTAAACTCTTACGGTTGGACTGTTACCATCGCACTAGTAGGCAATCTCCATTTTCCACAGAATAAAACTGTAATGGCTGTAGGTCATTTTCTAGTTCAATTTCTCTGCCCGGCATCTAAAATTAAAATCAAGTAGGGAGCAGTAAGACCGATCTGATGGTGCATGCTATCCATGCCACCCTCCAAGGGCAGGTGAGGTGTGAAGTCAAAGGCTGCCTCCATTTAGAGCCTGTTATGTATGGCTCACAGTACTGTAGAGGACTAAGCTTAGCTTTGTGTTTTTGCTTAGCAACTTACCTTGGAACTTTCGTAGGACAACAGAAGTTCTGACACAGGAACTTTGAGAAGACGTGACAACAGTCCCTTTACCTTTTGAACTGTCATGGAGTCtgtcaaagaaaagaaacttttaaGTGACAACTACATGTAGAAACAGCTCAGGAGAGGCAGCCATTGATGGAAGGCTTGAGTCATTCTACCAGGTGATCTTTTAACAAAGTGGGAAATGGAGCCAGTGTTTGACCCAAGAGGTCTTGACAGTGAGGTGCCATACCATTTCAGTAGCATTTACTATTTCTTCCTCAATCGGAATAACCAGAAATAATTATCTCACCGAAGAGGACACAATCTAGGCCTTTGTGATAACTTCCTAAGGGGTTGCTGAAGTTCCCTGGAGTGGGGGCCTTGCGGGGCCCCTCCCAGCACGAGCATCCAGTCACCATCAGGATGTGCACACATGACCACTAGGTGTGGGAAAGGAACTCTGAAGAACAAATGCGCTGGTCCGTCAAGAACACACTAGGAATTTCTTTCCAAAGACAGGTTGTGgtatatatggatattttgaTTAAGAATATTAGTTTCTCTGAAGCTTTAGCTGAAAGTACAGCAATAGTGTGGTGTCCCACAATTATCACAATGTAGtcaattatttttctataaattgtTTTTATAAATGCTGTGTTTTTATGCAACTTGTGATAATAAATATTCTCTATTTTAGAATAAACTAGCCTTTTCCTATTTTTGACTCACTTC