RCPedia: Genes

Summary

Gene Name	Cnih4	Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	cornichon family AMPA receptor auxiliary protein 4
Also known as	CNIH-4\|D530030D03Rik\|E430023H19Rik\|HSPC163
Coordinate	chr1:180977437-180996559
Strand	+
Gene summary	Predicted to enable CCR5 chemokine receptor binding activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in endoplasmic reticulum and endoplasmic reticulum-Golgi intermediate compartment. Predicted to be active in COPII-coated ER to Golgi transport vesicle and endoplasmic reticulum membrane. Orthologous to human CNIH4 (cornichon family AMPA receptor auxiliary protein 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cnih4

Retroname	Coord	Strand	Genomic Region	ENSG
Cnih4P1	chr9:9434564-9435083	+	Intergenic	ENSMUSG00000111317	UCSC

Expression

Transcript Sequences

>NM_030131.3
CATGCCGCCTATCCCAGCGGCGCGGCCCGAAGCTGGTTTGACGGGCGGAGCGGCGGCGGAGGATGGAGGCGGTGGTGTTCCTCTTCTCGCTCCTCGACTGTTGCGCGCTCATCTTCCTCTCCGTCTACTTCATCATTACATTGTCTGATTTAGAATGTGATTACATTAACGCCAGATCATGTTGCTCAAAATTAAACAAGTGGGTGATCCCGGAGTTGGTCGGCCACACCATTGTCACTGTGCTGATGCTTGTCTCCCTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTCGCCACGTGGAATATATATAGGTTCATTATGGTGCCAAGTGGCAACATGGGAGTATTTGATCCAACAGAAATACACAACCGGGGACAGTTAAAGTCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCTACCTGCTCTGTTTCTTCATGTATCTCTATAGTATGATTCTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGGGTTGAAGCCAAGCTATACTACACACTGCACAATTGAGGAGCCAGAGACTACTAAACCACCCTTAGAACCATGACCAGAGCAGTATATATTTTGGtctttgaacaaaaaaaaaaaacctatttttgctgtatttttaccacataaagtatttaaaaaaaataaattgagttTTTGTAGATTTCTGATTTCTGAACTCCAGCAAATGAAGGTGTTTTGTCTCCTCTGTGGCTGTTTGGTAGAAGTAGGAATGTGTGCCAGCTTTGCATGCCAAAGAGAGAAGGGACAGACCTAAAAGAGCCATTAATACAGTGGTTCCCAGCCTGTGGGTCACCACCTTTTAGGAgtcaaatgactctttcacaggggtcacctaagaccattgaaaacatagatatttacattgtgattcataactgtagcaaaattacaattacgaAGTAACAGCGAAAatggttttatggttgggggggttcacaacatgaggaactgtattaaagtgtcacagcattaggaaagttgagaaccaccacCTTAGTAGATGAGCTGCACTGTCTGAAAAGCCAGAGCCGAAAGCAACACAGCGAATCTGGATATATGAAGAAAGTCATGTTAATGTGGCTTAAGGATTGGGGGCTTTTCAGCTATGACTTTCAGTagtaatgacattttaaaatatatttatttgcagTATTTGAAACCTTATGAGCCATGTGCCCAAATACAATGTAATTCCTGCttccagaaaggaaaaatacattttaaaatcaagaTTTTATTAAGAGCTTTCATTTTAAAGCTTGTACCTCTGTAAtgatcctccccacctccctctaaTCACCTCAGCTCTTGCCAGACCTTATTTTTGCATCATAACTGTTCCATTTGTATTTGAtttctttaataatatattttaatggaTTTGGAGAGGTGACTAGGTAGAAGTCACTGAGAATCAGGAAACCAGTCAGTCACTGTTAGAAAAACAACGCAAGAGCAGCCCGCGAGTGCTCACTTGGTGCAGAATTCGCTGCAGCACTGACCACTCTGGACGGGGAGGGAGCCCAGCACAAGCCGTTGCATGCAGTACCCAGCGACTCTGGAAGCTCCTGCTCTGTATGAGAGGGCGCCATTAACCTAGTCTGTGCTCATCATATCTTGCAGGGTGGTGTGAATCTGGCAATCCAACCTCTTTCCTAGTTACACTTTAGGGTTGGTATCCTAAGCACTGACACATAAGGAAACAGGACTGTACACTGTGGCATAATGGACCTTGGCAGCAAAACAAAGTGTGTGCTTCCCCAGaagattaaatttttaaatgttgcatgtctctgtttttttaattttttttcatttgtttattttatgtatatgagtacactgtccttgtcttcagacgcaccagaagagggcatcagatccctcttttgagccaccatgtggttgctgggaattgaactcaggatctccggaagagcagtcggtgctcttaaccactgagccatctctccagccatctaAATGTCGCCTGTCTGATTGAGTGAGGAGTTGGTAGCAGTAAGTGCCAGGACACTGAGTCCCCTGTTAGAGTGGGAGCTGTGCTCTGACCAAACAGGAAAAGAGGGTTGGGAGGGCATGCAAAGGAAACCTGGTTCCCTGGGCCTCTGTAAAAGCCGGGAAATGCTACCTATAATAATCTTATGTTTCTGCCTAGAAAAGGGCTAAGCAGCTGCACCATGGGAGTTACTTTATACTtcctcctactgtttccctgtaGGGCACCTTCTGCTTCACTCTACCTTCCAGTGCCCTCACCGTTATTCAAGCTTTTCAAACAGACCTGCTGTTGGCTTCATAGAACTGGGAGACACAATGGAGGGCTTTTGTCTAGAATGTTTGAGCTTAAACTGAAAGCCATGGAACTAAGCACCTTTGGGCTGTCTTGTTGGGCCTAAGCTGCAGAGGAGGACTGACTGAGAAAGCTGCCTTGTCTATAAAGACCCAGCTTAACTCTGAAACACTAGTTATGAATGGACACCTATTCCTCATACTGCTTGTGTGTATCAAAGCCAGGAAAGGAGAGAGTCATTTTTCTGGGGTTTTTGGAGGTAGGAGGGATGCTTTTATAAATGCTGAAGAAGAGGATGTGTGGCCTAAGTGGCTACGGCTCTGAAGCTTGAGGTGCTGCTGTATGGTGATGAGGGTGTTTGCAGAGGAGCTGTGAGATctgagagggggggggaggggggaatgacTAGAGGTTGTCAGAGTTCTCAAAGATCTGAACATTGGGAGCTCAGCTCGGTGTCCTCTTGTGCTCTCTTCCTGCCTGCCCTCTGTAAAGGCTCTAAGGTTGAAGGCCTGGCCAGTGCAGCCTGCTGTGGAATGCAGCCACATTGTGTCATGTTTCCTTAGGCTTTTAACTGTAGCAGATGCCTTGTGTCTAGAGCTGAGGAAGCAAAGCCCAAGATGcggcacccccccacccccacccccacacacacatctaacATGTCTCTTCACAAGAAGACAATGTAGCAAGAGCCCAGAGGCTTCCTTCTGACCTGCTCTGACTTTAAACCTCTGTACTGTTTCCTGTGGGAAGTACTCGCCACTTTCCATGTGGCATCTCTTGTATGCAAACTAGATTGTGCGCTCCTAGAGGGCAGAGTCCACTCTGATCACGTTTGTGTTGTCTTCCTTACCCTTCTGGCGCCTAATACAGTGCCTTGCACACAGACACAATAAATGGCAGTTGAATAACAAATTAA