Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name 4933434E20Rik
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name RIKEN cDNA 4933434E20 gene
Also known as 5730552F22Rik|NICE-3|NS5ATP4
Coordinate chr3:89958943-89970648
Strand +
Gene summary Involved in phagocytosis. Acts upstream of or within in utero embryonic development. Predicted to be located in Golgi apparatus and mitochondrion. Orthologous to human C1orf43 (chromosome 1 open reading frame 43). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from 4933434E20Rik

Retroname Coord Strand Genomic Region ENSG
4933434E20RikP2 chr13:61871261-61872758 + Intragenic
ENSMUSG00000113899 UCSC
4933434E20RikP3 chr18:74552744-74554722 - Intergenic
ENSMUSG00000118303 UCSC
4933434E20RikP1 chr1:136725393-136726820 - Intergenic
ENSMUSG00000104261 UCSC

Expression

Transcript Sequences

>NM_001287087.1
AGTATAGACAACAGGAAGTCAAAGACTGCAGCGAAAATATATTCCACGACCAGGGTCGCACGTGACGCGAAAGGGCCGCGCACGTCAGCGTGCGCGCGCCTCCCCGCCACGAAACACTGCTCTTGAGTTCCGCgcgcccgccccgcccccgccccgccccgcacGGATCCGCCTCCATCACGTGACTCCAGTAAGGTCTCGGCTTCCTCTTACTGGCGTAGTTCCGCGTCTCCGCACTCCCAGcctggttttttttttttttttttttttaatcgaaaACCATATGGAAATGTTCGGAGAGCTCCAGGGAACCTAGGTTCCCTGGCTTCGGCAGAGCCTGGGCTAACGCGCGAGCGCGGCGGGACTGTCCTAGCAGGTGTTCCCGGAGAGAGAGGCGATGGCGTCTAGTAGTAACTGGCTTTCTGGAGTGAATGTCGTGCTGGTGATGGCGTACGGGAGCCTGGTATTCGTACTGCTGTTTATTTTTGTGAAGAGACAAATCATGCGCTTTGCAATGAAATCTAGAAGGGGACCTCATGTTCCTGTAGGACACAATGCCCCCAAGGACTTAAAAGAGGAGATCGATATTCGACTATCCAGGGTTCAAGATATCAAGTATGAACCCCAGCTCCTTGCAGATGATGATACCAGACTACTGCAGCTGGAAACCCAGGGGAATCAAAGTTGCTACAACTATCTGTACAGAATGAAAGCTCTAGATGCCATCCGTGCCTCTGAGATCCCGTTTCATGCTGAAGGCCGGCACCCCTGTTCTTTAATGGGTAAGAATTTCCGCTCCTACTTGCTAGATCTGCGAAATACTAGCACTCCTTTCAAGGGTGTTGGCAAGGCCCTCATTGATACTCTCCTGGATGGATATGAGACAGCCCGCTATGGGACAGGGGTCTTTGGCCAGAGTGAGTACTTACGATATCAAGAGGCCTTGAGTGAGCTGGCCACTGTGGTCAAAGCACGAATTGGAAGTTCTCAGAGACAACACCAGTCAGCAGCCAAAGACCTAACTCAGTCACCTGAAATGTCACCAACAACAATCCAGGTCACATACCTGCCTTCCAGTCAGAAGAGCAAACGCCCTAAGCACTTCCTGGAACTGAAGAGCTTTAAGGACAACTATAACACACTGGAGAGCACTCTGTGATGGGGCTGCACACGTGCAGCCGTGCAGCACTCGGGATGTCTGGTTCAGCAGACCCAGGCTTTATTGGCCAAAGCATTCTTACAGAACAGTGTCTAAAAGGTCATTCCCAACCCTTTCTGATATTGGCTAAGACCTCAGTATCTCCCAGTAGCACTTCTTCTGGATTTGAATTCAAATGTCATTCTTAACATTTCTGTTGATGCTTCTTTGAAAATCTTCGCTTGATTTTGGCTGTAAATCACCTACCCTGTTAAATGCTGTTTAATCCCAAGGATGTAAGTTGAGGTGAGGTGTCTTCTCTGTCTGCCCCATTGCACTCAACTGAATAGAAATATTTGGGTTTAGAGCATCTCAAAAGTGGGTAGAATGTCCTTTGGGATTTTGTTGCTCCGTTTAAACCAGGTGTATTGTGACATGAACATGACTTTCCTAAAGTGGAAGGATCTGTCCCCACCTTCACCCAGTCCTTAGGACAAGTAGAAAGGGGCATTCTGGCACTTGGCATAACCTATGCCACGATGGTGAGATAATGTGAAAAAGTGGTATCCTCTGATGTCAGCGTATTAGTCTCAGTTTACAAAGTACTTAATAAAACTAACTACTGTAAAACCATGGATCATTTCTTTAGAGTGGTCTTTAGAGCAACAGGCATTTGATGTGTGCTTACATTTTCCTTACAGGACATAGGGTGTGGAGTGTCGCTTCCAGAAACTGATTGGATTGTGTGTCTGGATCTAAACTACTGATAGTCTGAAATTCCAACAGAAGAAATCCTAAAATAGGGACTGTGTGGCTCATGCTTATAGCCTGGCCTTGTCACTAATAGAAAGCTGGAGAATCAGGATTCCCTTCAGGTCACTAGGGCAACAGGCCCAAGTAACCAGTCAACTACCAGGACTAGGGTCATTGTTGGACGCCTAAATGTTGCTATGACTACTGAAACCTTGGTGACCAAACTAAACAGAAAGGAGAGCCTTCCCAGTGTCCCCAAACTTAGCAAGCATGTCTGTAGTAGATATGTCTGCAGAAAAAATGACAAAACTAGAAGAGGTATGGAGGGTCGGAAAGAGGGTTGGGAGTTGGTGGAGTTTTCTTTGATATGGTTCCAGGTTATTTTACCCAAAGTACACCATTCCCGAGAAAGACCCTTGGAAGCATAAGGGAGAGTTGGCAATATATGGGAAACTGCTTGTGGAACAGAGTGGCTGTTTGCATAAGTCCCTCTGGCTCCTGTATTTTCTCTTCAGTCTGATTTCAAGATGTGGAGCTTTCCCACTTGCCCCTATGAAGCTCACTACTTCATTCCTCAAAAAGTGGGTACTAGTGGTATGCTTCTAGCAATCCAGGAGATCAACAGAACTCCCTTCTCTTGCAGAATTTGCAAAGAGCTGTGGCACTTAAGAAGACTGTCGACAGGTAATCTGTTTTCATCTGCTCTCATCAGTTTGTATTTTCTGCTCTCCTCTCCCTGAGGCACCACCGAAATCTGCTCTCCGTGAGGACTCCTC
>NM_025762.3
AAGTCACGTggcggagggggtgggggtggggaaatgggACGGGAAGGTCCGATGCTTAACTAGCGCCCCCATCCACCATGTTTTCTGACGGACTCtagcctggttttttttttttttttttttttaatcgaaaACCATATGGAAATGTTCGGAGAGCTCCAGGGAACCTAGGTTCCCTGGCTTCGGCAGAGCCTGGGCTAACGCGCGAGCGCGGCGGGACTGTCCTAGCAGGTGTTCCCGGAGAGAGAGGCGATGGCGTCTAGTAGTAACTGGCTTTCTGGAGTGAATGTCGTGCTGGTGATGGCGTACGGGAGCCTGGTATTCGTACTGCTGTTTATTTTTGTGAAGAGACAAATCATGCGCTTTGCAATGAAATCTAGAAGGGGACCTCATGTTCCTGTAGGACACAATGCCCCCAAGGACTTAAAAGAGGAGATCGATATTCGACTATCCAGGGTTCAAGATATCAAGTATGAACCCCAGCTCCTTGCAGATGATGATACCAGACTACTGCAGCTGGAAACCCAGGGGAATCAAAGTTGCTACAACTATCTGTACAGAATGAAAGCTCTAGATGCCATCCGTGCCTCTGAGATCCCGTTTCATGCTGAAGGCCGGCACCCCTGTTCTTTAATGGGTAAGAATTTCCGCTCCTACTTGCTAGATCTGCGAAATACTAGCACTCCTTTCAAGGGTGTTGGCAAGGCCCTCATTGATACTCTCCTGGATGGATATGAGACAGCCCGCTATGGGACAGGGGTCTTTGGCCAGAGTGAGTACTTACGATATCAAGAGGCCTTGAGTGAGCTGGCCACTGTGGTCAAAGCACGAATTGGAAGTTCTCAGAGACAACACCAGTCAGCAGCCAAAGACCTAACTCAGTCACCTGAAATGTCACCAACAACAATCCAGGTCACATACCTGCCTTCCAGTCAGAAGAGCAAACGCCCTAAGCACTTCCTGGAACTGAAGAGCTTTAAGGACAACTATAACACACTGGAGAGCACTCTGTGATGGGGCTGCACACGTGCAGCCGTGCAGCACTCGGGATGTCTGGTTCAGCAGACCCAGGCTTTATTGGCCAAAGCATTCTTACAGAACAGTGTCTAAAAGGTCATTCCCAACCCTTTCTGATATTGGCTAAGACCTCAGTATCTCCCAGTAGCACTTCTTCTGGATTTGAATTCAAATGTCATTCTTAACATTTCTGTTGATGCTTCTTTGAAAATCTTCGCTTGATTTTGGCTGTAAATCACCTACCCTGTTAAATGCTGTTTAATCCCAAGGATGTAAGTTGAGGTGAGGTGTCTTCTCTGTCTGCCCCATTGCACTCAACTGAATAGAAATATTTGGGTTTAGAGCATCTCAAAAGTGGGTAGAATGTCCTTTGGGATTTTGTTGCTCCGTTTAAACCAGGTGTATTGTGACATGAACATGACTTTCCTAAAGTGGAAGGATCTGTCCCCACCTTCACCCAGTCCTTAGGACAAGTAGAAAGGGGCATTCTGGCACTTGGCATAACCTATGCCACGATGGTGAGATAATGTGAAAAAGTGGTATCCTCTGATGTCAGCGTATTAGTCTCAGTTTACAAAGTACTTAATAAAACTAACTACTGTAAAACCATGGATCATTTCTTTAGAGTGGTCTTTAGAGCAACAGGCATTTGATGTGTGCTTACATTTTCCTTACAGGACATAGGGTGTGGAGTGTCGCTTCCAGAAACTGATTGGATTGTGTGTCTGGATCTAAACTACTGATAGTCTGAAATTCCAACAGAAGAAATCCTAAAATAGGGACTGTGTGGCTCATGCTTATAGCCTGGCCTTGTCACTAATAGAAAGCTGGAGAATCAGGATTCCCTTCAGGTCACTAGGGCAACAGGCCCAAGTAACCAGTCAACTACCAGGACTAGGGTCATTGTTGGACGCCTAAATGTTGCTATGACTACTGAAACCTTGGTGACCAAACTAAACAGAAAGGAGAGCCTTCCCAGTGTCCCCAAACTTAGCAAGCATGTCTGTAGTAGATATGTCTGCAGAAAAAATGACAAAACTAGAAGAGGTATGGAGGGTCGGAAAGAGGGTTGGGAGTTGGTGGAGTTTTCTTTGATATGGTTCCAGGTTATTTTACCCAAAGTACACCATTCCCGAGAAAGACCCTTGGAAGCATAAGGGAGAGTTGGCAATATATGGGAAACTGCTTGTGGAACAGAGTGGCTGTTTGCATAAGTCCCTCTGGCTCCTGTATTTTCTCTTCAGTCTGATTTCAAGATGTGGAGCTTTCCCACTTGCCCCTATGAAGCTCACTACTTCATTCCTCAAAAAGTGGGTACTAGTGGTATGCTTCTAGCAATCCAGGAGATCAACAGAACTCCCTTCTCTTGCAGAATTTGCAAAGAGCTGTGGCACTTAAGAAGACTGTCGACAGGTAATCTGTTTTCATCTGCTCTCATCAGTTTGTATTTTCTGCTCTCCTCTCCCTGAGGCACCACCGAAATCTGCTCTCCGTGAGGACTCCTC