Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Choloepus didactylus
Full Name N/A
Also known as HMGB1
Coordinate chr12:9518879-9526979
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P1 chr1:117098472-117098948 + Intergenic
N/A UCSC
HMGB1P3 chr1:41739887-41741071 + Intragenic
N/A UCSC
HMGB1P4 chr1:71768138-71769226 - Intergenic
N/A UCSC
HMGB1P5 chr1:81306881-81307402 + Intergenic
N/A UCSC
HMGB1P6 chr2:128774877-128775976 - Intragenic
N/A UCSC
HMGB1P7 chr2:182525327-182525788 + Intergenic
N/A UCSC
HMGB1P8 chr2:68391507-68393591 - Intergenic
N/A UCSC
HMGB1P10 chr3:138130523-138131661 + Intergenic
N/A UCSC
HMGB1P11 chr4:116692554-116693642 + Intragenic
N/A UCSC
HMGB1P12 chr4:178967544-178968151 - Intergenic
N/A UCSC
HMGB1P13 chr8:61500866-61512656 + Intragenic
N/A UCSC
HMGB1P14 chr8:89744803-89746009 - Intergenic
N/A UCSC
HMGB1P15 chr9:49633959-49634971 - Intergenic
N/A UCSC
HMGB1P16 chr9:57534477-57535403 - Intergenic
N/A UCSC
HMGB1P17 chr10:83490049-83490620 - Intragenic
N/A UCSC
HMGB1P18 chr10:94452257-94452973 + Intragenic
N/A UCSC
HMGB1P21 chr14:76756503-76757660 + Intragenic
N/A UCSC
HMGB1P22 chr16:24480067-24480504 + Intergenic
N/A UCSC
HMGB1P23 chr18:30858240-30859432 + Intragenic
N/A UCSC
HMGB1P25 chr24:25564751-25566705 - Intergenic
N/A UCSC
HMGB1P26 chrX:190135755-190136886 + Intergenic
N/A UCSC
HMGB1P27 chrX:30690714-30692937 + Intergenic
N/A UCSC
HMGB1P28 chrX:31364104-31365354 - Intergenic
N/A UCSC
HMGB1P29 chrX:56179685-56180721 - Intergenic
N/A UCSC
HMGB1P2 chr1:235353372-235355267 - Intergenic
N/A UCSC
HMGB1P9 chr3:134602713-134603161 + Intragenic
N/A UCSC
HMGB1P19 chr12:14350804-14355044 - Intragenic
N/A UCSC
HMGB1P24 chr21:47100121-47101157 - Intergenic
N/A UCSC
HMGB1P20 chr13:91288882-91289971 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_037799722.1
CGCTGGCTGGAGAGTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGCGAGCCGGGCGGGCGCTGGGCGACTCTGTGCCTCGCGGACGaaaaataactagACATGGGCAAAGGGGACCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCCTTCTTCGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGACGCTTCCGTCAACTTTTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACTATGTCtgctaaagagaaaggaaaatttgaaGACATGGCCAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatattCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggcctttttcttgttttgttctgAGTATCGCCCAAAAATCAAAGGCGAGCATCCTGGCTTGTCCATTGGCGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACCGCTGCGGATGACAAGCAGCCTTATGAAAAGAAGGCTGCCAAGCTGAAGGAGAAATACGAAAAGgatattgcTGCATACCGAGCTAAAGGAAAGCCTGATGCTGCAAAAAAGGGAGTTGTCAAGGctgagaaaagcaagaaaaagaaggaggaggaggaagacgaagaagatgaggaagatgaggaggaagaggaagatgaagaagatgaagatgaagaagatgatgatgatgatgaataaGTCAGTTCTAgcgcagtttttttttttcttgtctataaaGCATTTAACCCCCCTGTACACAACTCACtccttctaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTTTTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATCTGAAATAATTGTCGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTCTGAAATTCTTCTTGAGGGGAAGCTAGtcttttgcttttgcccattttgaatCACATGATATTATGACTGTTCATCTTTTCCATGTAGTTCGCTGATAAGCTTTCATCTGCACACTTGTGATGGgggtaataaaattgaattgcgACAGTTTTCATCCAGAGTTGAAACTCAGAAATCTAGATCAGTTGAAATCAAACTTTGCATAGCCCAGTGACCACATTTACAAAGTAAAGACTAACCAATCTATTCACAGGATGGGAGTATTGGCCATTCAGTAATGTGTCCTTGAAGGACTAATAGAAAGCTATATTCTAATCTTTACAGGAGGACTCTACAAGTCTTTTAACTGCCGTTACCATGTAATGGCAGTTATATTTGCAGTTCCCATGTTAAAGAAGGCCTGAGAGTGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCGTGATAAACTTTGTTGACATTAGTCCCGCCGAAGGCTTTATGAAAGTGCTGGCCATAAACATAACTTGAGATTCTccattataattaaatattttaaattagttcGGCCAGTTTTTGAAACAATGGTGTCACATTTAAAGTGGTATGTTTTCATATATTGTGATTTGCCCCTTTATGAATGAGATAGACATAAGAAAAGAAGACACTTGAACTTTGCATCTCAGTACCGGTTACCCAATTTATTTGAATTcgctttttctttataaaacccATACTCATTCACTGGGGTCATTTTTACCTGCTTAGCAGCTTAGGGAACAATTTGGCGACTGTGGTTTTTGAGAGTATCGTTCTCTTAAAGTGCCAGTGTGTTAAAATAGCGTTCTTATAATTTTACATGCTTTTGTGGTGGagtactgttttgttttattatttgacttttggattctttccatttGCATTTGTTTATGTATGATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATAATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_037799723.1
CCCGCGGAGCGAAGTTTCTCCGCCGAGAGGCTGTTTCACCGGAATCGCCCGGAAAACTTCAGATCCGCGGGGATCGAGGCCCAGGAGTTGGGAAGGGTCTCCTCCTGCAGGGGCTTCTGACTGTTTCTTCCAAATGGAGCGCGAGCCCCCGAATACGCAGCCCTAGCCCGCGGACCTTTGGTTTGGTTGATTAAAAACCGTTTTGTAGATAAAAAAAATTGCCCGAATGCCCCGAGGGCTGTTCGCTGGGAAGAGGCGCGAGCAGaaaaataactagACATGGGCAAAGGGGACCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCCTTCTTCGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGACGCTTCCGTCAACTTTTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACTATGTCtgctaaagagaaaggaaaatttgaaGACATGGCCAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatattCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggcctttttcttgttttgttctgAGTATCGCCCAAAAATCAAAGGCGAGCATCCTGGCTTGTCCATTGGCGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACCGCTGCGGATGACAAGCAGCCTTATGAAAAGAAGGCTGCCAAGCTGAAGGAGAAATACGAAAAGgatattgcTGCATACCGAGCTAAAGGAAAGCCTGATGCTGCAAAAAAGGGAGTTGTCAAGGctgagaaaagcaagaaaaagaaggaggaggaggaagacgaagaagatgaggaagatgaggaggaagaggaagatgaagaagatgaagatgaagaagatgatgatgatgatgaataaGTCAGTTCTAgcgcagtttttttttttcttgtctataaaGCATTTAACCCCCCTGTACACAACTCACtccttctaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTTTTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATCTGAAATAATTGTCGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTCTGAAATTCTTCTTGAGGGGAAGCTAGtcttttgcttttgcccattttgaatCACATGATATTATGACTGTTCATCTTTTCCATGTAGTTCGCTGATAAGCTTTCATCTGCACACTTGTGATGGgggtaataaaattgaattgcgACAGTTTTCATCCAGAGTTGAAACTCAGAAATCTAGATCAGTTGAAATCAAACTTTGCATAGCCCAGTGACCACATTTACAAAGTAAAGACTAACCAATCTATTCACAGGATGGGAGTATTGGCCATTCAGTAATGTGTCCTTGAAGGACTAATAGAAAGCTATATTCTAATCTTTACAGGAGGACTCTACAAGTCTTTTAACTGCCGTTACCATGTAATGGCAGTTATATTTGCAGTTCCCATGTTAAAGAAGGCCTGAGAGTGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCGTGATAAACTTTGTTGACATTAGTCCCGCCGAAGGCTTTATGAAAGTGCTGGCCATAAACATAACTTGAGATTCTccattataattaaatattttaaattagttcGGCCAGTTTTTGAAACAATGGTGTCACATTTAAAGTGGTATGTTTTCATATATTGTGATTTGCCCCTTTATGAATGAGATAGACATAAGAAAAGAAGACACTTGAACTTTGCATCTCAGTACCGGTTACCCAATTTATTTGAATTcgctttttctttataaaacccATACTCATTCACTGGGGTCATTTTTACCTGCTTAGCAGCTTAGGGAACAATTTGGCGACTGTGGTTTTTGAGAGTATCGTTCTCTTAAAGTGCCAGTGTGTTAAAATAGCGTTCTTATAATTTTACATGCTTTTGTGGTGGagtactgttttgttttattatttgacttttggattctttccatttGCATTTGTTTATGTATGATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATAATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_037799724.1
atTAAAACAATAACTGGTGaaaaataactagACATGGGCAAAGGGGACCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCCTTCTTCGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGACGCTTCCGTCAACTTTTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACTATGTCtgctaaagagaaaggaaaatttgaaGACATGGCCAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatattCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggcctttttcttgttttgttctgAGTATCGCCCAAAAATCAAAGGCGAGCATCCTGGCTTGTCCATTGGCGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACCGCTGCGGATGACAAGCAGCCTTATGAAAAGAAGGCTGCCAAGCTGAAGGAGAAATACGAAAAGgatattgcTGCATACCGAGCTAAAGGAAAGCCTGATGCTGCAAAAAAGGGAGTTGTCAAGGctgagaaaagcaagaaaaagaaggaggaggaggaagacgaagaagatgaggaagatgaggaggaagaggaagatgaagaagatgaagatgaagaagatgatgatgatgatgaataaGTCAGTTCTAgcgcagtttttttttttcttgtctataaaGCATTTAACCCCCCTGTACACAACTCACtccttctaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTTTTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATCTGAAATAATTGTCGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTCTGAAATTCTTCTTGAGGGGAAGCTAGtcttttgcttttgcccattttgaatCACATGATATTATGACTGTTCATCTTTTCCATGTAGTTCGCTGATAAGCTTTCATCTGCACACTTGTGATGGgggtaataaaattgaattgcgACAGTTTTCATCCAGAGTTGAAACTCAGAAATCTAGATCAGTTGAAATCAAACTTTGCATAGCCCAGTGACCACATTTACAAAGTAAAGACTAACCAATCTATTCACAGGATGGGAGTATTGGCCATTCAGTAATGTGTCCTTGAAGGACTAATAGAAAGCTATATTCTAATCTTTACAGGAGGACTCTACAAGTCTTTTAACTGCCGTTACCATGTAATGGCAGTTATATTTGCAGTTCCCATGTTAAAGAAGGCCTGAGAGTGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCGTGATAAACTTTGTTGACATTAGTCCCGCCGAAGGCTTTATGAAAGTGCTGGCCATAAACATAACTTGAGATTCTccattataattaaatattttaaattagttcGGCCAGTTTTTGAAACAATGGTGTCACATTTAAAGTGGTATGTTTTCATATATTGTGATTTGCCCCTTTATGAATGAGATAGACATAAGAAAAGAAGACACTTGAACTTTGCATCTCAGTACCGGTTACCCAATTTATTTGAATTcgctttttctttataaaacccATACTCATTCACTGGGGTCATTTTTACCTGCTTAGCAGCTTAGGGAACAATTTGGCGACTGTGGTTTTTGAGAGTATCGTTCTCTTAAAGTGCCAGTGTGTTAAAATAGCGTTCTTATAATTTTACATGCTTTTGTGGTGGagtactgttttgttttattatttgacttttggattctttccatttGCATTTGTTTATGTATGATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATAATACTAATAAACTAATAATTGCAGAGGTTTTAAA
>XM_037799725.1
GGCCCCCGCGGAGCGAAGTTTCTCCGCCGAGAGGCTGTTTCACCGGAATCGCCCGGAAAACTTCAGATCCGCGGGGATCGAGGCCCAGGAGTTGGGAAGGGTCTCCTCCTGCAGGGGCTTCTGACTGTTTCTTCCAAATGGAGCGCGAGCCCCCGAATACGCAGCCCTAGCCCGCGGACCTTTGaaaaataactagACATGGGCAAAGGGGACCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCCTTCTTCGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAGCACCCGGACGCTTCCGTCAACTTTTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACTATGTCtgctaaagagaaaggaaaatttgaaGACATGGCCAAGGCGGACAAGGCCCgttatgaaagagaaatgaaaacctatattCCTCCTAAAGGGGAGACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCttcggcctttttcttgttttgttctgAGTATCGCCCAAAAATCAAAGGCGAGCATCCTGGCTTGTCCATTGGCGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACCGCTGCGGATGACAAGCAGCCTTATGAAAAGAAGGCTGCCAAGCTGAAGGAGAAATACGAAAAGgatattgcTGCATACCGAGCTAAAGGAAAGCCTGATGCTGCAAAAAAGGGAGTTGTCAAGGctgagaaaagcaagaaaaagaaggaggaggaggaagacgaagaagatgaggaagatgaggaggaagaggaagatgaagaagatgaagatgaagaagatgatgatgatgatgaataaGTCAGTTCTAgcgcagtttttttttttcttgtctataaaGCATTTAACCCCCCTGTACACAACTCACtccttctaaagaaaaaaattgaaatgtaaggCTGtgtaagatttgtttttaaactgtACAGTGTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTGGTGGTTTTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGGCATGGAAATTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTATATATGGGGATGGTAGTTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATCTGAAATAATTGTCGTTCTGTTAACTGAATACCACTCtgtaattgcaaaaaaaaaaaagttgcagctGTTTTGTTGACATTCTGAATGCTTCTaagtaaatacaattttttttattagtattGTTGTCCTTTTCATAGGTCTGAAATTCTTCTTGAGGGGAAGCTAGtcttttgcttttgcccattttgaatCACATGATATTATGACTGTTCATCTTTTCCATGTAGTTCGCTGATAAGCTTTCATCTGCACACTTGTGATGGgggtaataaaattgaattgcgACAGTTTTCATCCAGAGTTGAAACTCAGAAATCTAGATCAGTTGAAATCAAACTTTGCATAGCCCAGTGACCACATTTACAAAGTAAAGACTAACCAATCTATTCACAGGATGGGAGTATTGGCCATTCAGTAATGTGTCCTTGAAGGACTAATAGAAAGCTATATTCTAATCTTTACAGGAGGACTCTACAAGTCTTTTAACTGCCGTTACCATGTAATGGCAGTTATATTTGCAGTTCCCATGTTAAAGAAGGCCTGAGAGTGTATCCCCAAAAGCGTGAGCTTAAAATACAAGACTGCCGTGATAAACTTTGTTGACATTAGTCCCGCCGAAGGCTTTATGAAAGTGCTGGCCATAAACATAACTTGAGATTCTccattataattaaatattttaaattagttcGGCCAGTTTTTGAAACAATGGTGTCACATTTAAAGTGGTATGTTTTCATATATTGTGATTTGCCCCTTTATGAATGAGATAGACATAAGAAAAGAAGACACTTGAACTTTGCATCTCAGTACCGGTTACCCAATTTATTTGAATTcgctttttctttataaaacccATACTCATTCACTGGGGTCATTTTTACCTGCTTAGCAGCTTAGGGAACAATTTGGCGACTGTGGTTTTTGAGAGTATCGTTCTCTTAAAGTGCCAGTGTGTTAAAATAGCGTTCTTATAATTTTACATGCTTTTGTGGTGGagtactgttttgttttattatttgacttttggattctttccatttGCATTTGTTTATGTATGATTTCAGGAGGAATACTGAACATCTGAGTCCTGGATAATACTAATAAACTAATAATTGCAGAGGTTTTAAA