| Name | Frog |  |
 |
 |
| Sci Name | Xenopus tropicalis | |||
| Assembly_ID | GCF_000004195.4 | |||
| Assembly_Name | xenTro10 |  |
||
| # of retrocopies | 194 | |||
| # of Parental genes | 97 |
| Retroname | Chr | Start | End | Strand | Ensembl | |
|---|---|---|---|---|---|---|
| abi2P1 | chr9 | 74967588 | 74967753 | + | N/A | UCSC |
| abo.3P1 | chr8 | 10345597 | 10346293 | + | N/A | UCSC |
| acta4P1 | chr1 | 145363553 | 145364688 | - | N/A | UCSC |
| acta4P2 | chr10 | 28628554 | 28629516 | - | N/A | UCSC |
| actg1P1 | chr4 | 36082643 | 36083216 | + | N/A | UCSC |
| actg1P2 | chr5 | 57888258 | 57888587 | + | N/A | UCSC |
| actg1P3 | chr8 | 111739732 | 111740057 | + | N/A | UCSC |
| asap3P1 | chr7 | 12443066 | 12444286 | - | N/A | UCSC |
| caprin1P1 | chr1 | 153591220 | 153591389 | + | N/A | UCSC |
| caprin1P10 | chr8 | 75184893 | 75185464 | + | N/A | UCSC |
| caprin1P11 | chr9 | 12885910 | 12886557 | + | N/A | UCSC |
| caprin1P2 | chr1 | 61997994 | 61998650 | - | N/A | UCSC |
| caprin1P3 | chr2 | 56792610 | 56793266 | + | N/A | UCSC |
| caprin1P4 | chr3 | 29097555 | 29098201 | + | N/A | UCSC |
| caprin1P5 | chr3 | 37538478 | 37539075 | + | N/A | UCSC |
| caprin1P6 | chr4 | 120415586 | 120416242 | + | N/A | UCSC |
| caprin1P7 | chr5 | 78610867 | 78611036 | + | N/A | UCSC |
| caprin1P8 | chr8 | 144504518 | 144505078 | - | N/A | UCSC |
| caprin1P9 | chr8 | 58624425 | 58625071 | + | N/A | UCSC |
| ccnjP1 | chr2 | 154352952 | 154353199 | + | N/A | UCSC |
| ccnjP2 | chr7 | 132592159 | 132592381 | - | N/A | UCSC |
| ckap2P1 | chr1 | 194360368 | 194360576 | + | N/A | UCSC |
| cox6cP1 | chr4 | 102535517 | 102535940 | - | N/A | UCSC |
| dnah5P1 | chr7 | 7396472 | 7396862 | - | N/A | UCSC |
| eef2.1P1 | chr8 | 20221661 | 20222159 | + | N/A | UCSC |
| eef2.1P2 | chr8 | 21103926 | 21104425 | + | N/A | UCSC |
| eif3eP1 | chr2 | 112467194 | 112467823 | - | N/A | UCSC |
| elmo3P1 | chr9 | 34820551 | 34821787 | - | N/A | UCSC |
| emx1P1 | chr4 | 142771083 | 142771862 | - | N/A | UCSC |
| gkap1P1 | chr1 | 86813110 | 86813638 | + | N/A | UCSC |
| gnpatP1 | chr8 | 141532093 | 141532342 | - | N/A | UCSC |
| gtf2a2P1 | chr1 | 26784849 | 26785082 | - | N/A | UCSC |
| h3-3aP1 | chr6 | 4062806 | 4063186 | + | N/A | UCSC |
| h3-3aP2 | chr6 | 5109907 | 5110288 | + | N/A | UCSC |
| h3-3aP3 | chr9 | 2677434 | 2677815 | - | N/A | UCSC |
| h3-3aP4 | chr9 | 3506193 | 3506573 | + | N/A | UCSC |
| h3-3bP1 | chr3 | 135234035 | 135234424 | + | N/A | UCSC |
| h3-3bP2 | chr9 | 4257128 | 4257517 | + | N/A | UCSC |
| h3-3bP3 | chr9 | 5558101 | 5558490 | + | N/A | UCSC |
| h3f3bP1 | chr3 | 135383622 | 135383835 | - | N/A | UCSC |
| h3f3bP2 | chr8 | 88099058 | 88099524 | + | N/A | UCSC |
| hspa1aP1 | chr4 | 22889258 | 22890101 | - | N/A | UCSC |
| hspa1aP2 | chr4 | 23981056 | 23982130 | + | N/A | UCSC |
| hspa1aP3 | chr8 | 75109142 | 75109972 | + | N/A | UCSC |
| hspa2P1 | chr7 | 119954712 | 119955868 | - | N/A | UCSC |
| ing3P1 | chr5 | 148123906 | 148124160 | + | N/A | UCSC |
| LOC100135246P1 | chr6 | 3798237 | 3803300 | + | N/A | UCSC |
| LOC100158544P1 | chr1 | 180287531 | 180287719 | + | N/A | UCSC |
| LOC100158544P2 | chr1 | 60139839 | 60140236 | + | N/A | UCSC |
| LOC100158544P3 | chr1 | 72110253 | 72110494 | + | N/A | UCSC |
| LOC100158544P4 | chr2 | 134093808 | 134093996 | + | N/A | UCSC |
| LOC100486697P1 | chr8 | 117838499 | 117840278 | - | N/A | UCSC |
| LOC100487522P1 | chr7 | 67495072 | 67495221 | - | N/A | UCSC |
| LOC100495968P1 | chr1 | 139812672 | 139812862 | - | N/A | UCSC |
| LOC100497860P1 | chr6 | 3306680 | 3308181 | - | N/A | UCSC |
| LOC100497860P2 | chr9 | 2654340 | 2654502 | + | N/A | UCSC |
| LOC100497860P3 | chr9 | 5037078 | 5037835 | + | N/A | UCSC |
| LOC101731081P1 | chr6 | 10613567 | 10613797 | + | N/A | UCSC |
| LOC101731081P2 | chr6 | 6310562 | 6310843 | - | N/A | UCSC |
| LOC101731710P1 | chr9 | 3050761 | 3051092 | - | N/A | UCSC |
| LOC101731929P1 | chr5 | 125562845 | 125569936 | + | N/A | UCSC |
| LOC101732321P1 | chr6 | 3915639 | 3918557 | + | N/A | UCSC |
| LOC101733728P1 | chr3 | 112300007 | 112300584 | - | N/A | UCSC |
| LOC101734382P1 | chr4 | 129988361 | 129991195 | - | N/A | UCSC |
| LOC101734382P2 | chr9 | 24394638 | 24394832 | + | N/A | UCSC |
| LOC101734628P1 | chr3 | 135241310 | 135242063 | - | N/A | UCSC |
| LOC101734648P1 | chr4 | 121890592 | 121893514 | + | N/A | UCSC |
| LOC101735136P1 | chr3 | 135647902 | 135648648 | + | N/A | UCSC |
| LOC105945582P1 | chr8 | 136663359 | 136663647 | + | N/A | UCSC |
| LOC105947221P1 | chr1 | 215692751 | 215693262 | - | N/A | UCSC |
| LOC105947317P1 | chr2 | 1369475 | 1370389 | - | N/A | UCSC |
| LOC105947317P2 | chr5 | 154568900 | 154569252 | + | N/A | UCSC |
| LOC105947317P3 | chr5 | 159121188 | 159121522 | - | N/A | UCSC |
| LOC105947317P4 | chr7 | 72983887 | 72985386 | - | N/A | UCSC |
| LOC105947317P5 | chr7 | 97293557 | 97295377 | + | N/A | UCSC |
| LOC105947729P1 | chr6 | 2854356 | 2854578 | - | N/A | UCSC |
| LOC108644467P1 | chr6 | 3581288 | 3584299 | + | N/A | UCSC |
| LOC116407570P1 | chr6 | 4057037 | 4057662 | - | N/A | UCSC |
| LOC116407570P2 | chr6 | 5289855 | 5290569 | - | N/A | UCSC |
| LOC116407570P3 | chr9 | 2678714 | 2679415 | - | N/A | UCSC |
| LOC116407570P4 | chr9 | 3504899 | 3505670 | + | N/A | UCSC |
| LOC116407570P5 | chr9 | 4255455 | 4256187 | + | N/A | UCSC |
| LOC116407570P6 | chr9 | 5556456 | 5557176 | + | N/A | UCSC |
| LOC116407577P1 | chr9 | 3372394 | 3374606 | - | N/A | UCSC |
| LOC116407720P1 | chr9 | 15801134 | 15801668 | - | N/A | UCSC |
| LOC116407720P2 | chr9 | 16444392 | 16445027 | - | N/A | UCSC |
| LOC116407720P3 | chr9 | 17594997 | 17595778 | + | N/A | UCSC |
| LOC116407720P4 | chr9 | 18329869 | 18330653 | - | N/A | UCSC |
| LOC116407720P5 | chr9 | 19250628 | 19251410 | + | N/A | UCSC |
| LOC116407737P1 | chr9 | 4970992 | 4971457 | + | N/A | UCSC |
| LOC116407744P1 | chr10 | 4678634 | 4678905 | - | N/A | UCSC |
| LOC116407946P1 | chr2 | 165505448 | 165506269 | + | N/A | UCSC |
| LOC116407969P1 | chr4 | 25401247 | 25401997 | + | N/A | UCSC |
| LOC116409809P1 | chr3 | 135482101 | 135483473 | - | N/A | UCSC |
| LOC116409809P2 | chr6 | 4061077 | 4061352 | + | N/A | UCSC |
| LOC116410409P1 | chr1 | 171642138 | 171642850 | - | N/A | UCSC |
| LOC116410409P2 | chr1 | 35047653 | 35049565 | - | N/A | UCSC |
| LOC116410409P3 | chr2 | 108998255 | 108999900 | - | N/A | UCSC |
| LOC116410409P4 | chr5 | 55086023 | 55086987 | + | N/A | UCSC |
| LOC116410409P5 | chr5 | 65647235 | 65648152 | - | N/A | UCSC |
| LOC116410409P6 | chr6 | 55763528 | 55764426 | - | N/A | UCSC |
| LOC116410409P7 | chr8 | 61484168 | 61485826 | - | N/A | UCSC |
| LOC116410409P8 | chr10 | 35145820 | 35146810 | - | N/A | UCSC |
| LOC116410468P1 | chr3 | 144078652 | 144079402 | - | N/A | UCSC |
| LOC116411070P1 | chr1 | 122503281 | 122503880 | - | N/A | UCSC |
| LOC116411070P10 | chr2 | 164248799 | 164249185 | - | N/A | UCSC |
| LOC116411070P11 | chr2 | 36089196 | 36091967 | - | N/A | UCSC |
| LOC116411070P12 | chr2 | 52764829 | 52765473 | + | N/A | UCSC |
| LOC116411070P13 | chr2 | 70303323 | 70303760 | + | N/A | UCSC |
| LOC116411070P14 | chr3 | 75020195 | 75020865 | + | N/A | UCSC |
| LOC116411070P15 | chr3 | 92427829 | 92428019 | + | N/A | UCSC |
| LOC116411070P16 | chr4 | 119217999 | 119218492 | - | N/A | UCSC |
| LOC116411070P17 | chr4 | 45928464 | 45929106 | - | N/A | UCSC |
| LOC116411070P18 | chr4 | 83655972 | 83656766 | + | N/A | UCSC |
| LOC116411070P19 | chr5 | 102390549 | 102393960 | - | N/A | UCSC |
| LOC116411070P2 | chr1 | 134398976 | 134399779 | + | N/A | UCSC |
| LOC116411070P20 | chr5 | 105415111 | 105415657 | - | N/A | UCSC |
| LOC116411070P21 | chr5 | 126649985 | 126650138 | - | N/A | UCSC |
| LOC116411070P22 | chr5 | 46966945 | 46967418 | + | N/A | UCSC |
| LOC116411070P23 | chr5 | 91528327 | 91529159 | + | N/A | UCSC |
| LOC116411070P24 | chr6 | 102321939 | 102322727 | + | N/A | UCSC |
| LOC116411070P25 | chr6 | 105741649 | 105742106 | - | N/A | UCSC |
| LOC116411070P26 | chr6 | 135847636 | 135847925 | + | N/A | UCSC |
| LOC116411070P27 | chr6 | 19755929 | 19756492 | + | N/A | UCSC |
| LOC116411070P28 | chr6 | 27257952 | 27258691 | + | N/A | UCSC |
| LOC116411070P29 | chr6 | 82122676 | 82122857 | + | N/A | UCSC |
| LOC116411070P3 | chr1 | 56189454 | 56189654 | - | N/A | UCSC |
| LOC116411070P30 | chr6 | 95456442 | 95456892 | - | N/A | UCSC |
| LOC116411070P31 | chr7 | 65180244 | 65181026 | + | N/A | UCSC |
| LOC116411070P32 | chr7 | 69418470 | 69419080 | + | N/A | UCSC |
| LOC116411070P33 | chr7 | 74913035 | 74914619 | - | N/A | UCSC |
| LOC116411070P34 | chr7 | 78607625 | 78608381 | - | N/A | UCSC |
| LOC116411070P35 | chr8 | 74899918 | 74900751 | - | N/A | UCSC |
| LOC116411070P36 | chr9 | 33386007 | 33386598 | + | N/A | UCSC |
| LOC116411070P4 | chr1 | 85056309 | 85056794 | + | N/A | UCSC |
| LOC116411070P5 | chr1 | 86765612 | 86765844 | + | N/A | UCSC |
| LOC116411070P6 | chr1 | 90057787 | 90058621 | - | N/A | UCSC |
| LOC116411070P7 | chr1 | 9525912 | 9526126 | + | N/A | UCSC |
| LOC116411070P8 | chr2 | 126524574 | 126524725 | + | N/A | UCSC |
| LOC116411070P9 | chr2 | 152868718 | 152869550 | + | N/A | UCSC |
| LOC116411581P1 | chr7 | 133537619 | 133546958 | + | N/A | UCSC |
| LOC116411614P1 | chr1 | 162733836 | 162735203 | - | N/A | UCSC |
| LOC116411614P2 | chr1 | 215400004 | 215401388 | - | N/A | UCSC |
| LOC116411614P3 | chr3 | 86341729 | 86343095 | - | N/A | UCSC |
| LOC116411614P4 | chr4 | 141294406 | 141295764 | - | N/A | UCSC |
| LOC116411614P5 | chr4 | 9098495 | 9099731 | + | N/A | UCSC |
| LOC116411614P6 | chr8 | 71442434 | 71443802 | - | N/A | UCSC |
| LOC116411614P7 | chr8 | 87277614 | 87278969 | + | N/A | UCSC |
| LOC116411614P8 | chr9 | 60637473 | 60639767 | - | N/A | UCSC |
| LOC116411622P1 | chr6 | 2836043 | 2836262 | + | N/A | UCSC |
| LOC116411628P1 | chr6 | 4306751 | 4307401 | + | N/A | UCSC |
| LOC116411628P2 | chr9 | 4808015 | 4808562 | - | N/A | UCSC |
| LOC116412216P1 | chr6 | 96870 | 106922 | - | N/A | UCSC |
| mboat1P1 | chr2 | 45594297 | 45595436 | + | N/A | UCSC |
| mrpl10P1 | chr5 | 115346427 | 115346931 | - | N/A | UCSC |
| mrpl10P2 | chr5 | 88840489 | 88840715 | - | N/A | UCSC |
| mrps21P1 | chr1 | 157755205 | 157755469 | + | N/A | UCSC |
| nubp1P1 | chr2 | 52395178 | 52395696 | - | N/A | UCSC |
| nudt4P1 | chr7 | 22139763 | 22139910 | - | N/A | UCSC |
| phka1P1 | chr8 | 36971943 | 36972619 | - | N/A | UCSC |
| pmepa1P1 | chr3 | 150688123 | 150689185 | - | N/A | UCSC |
| ppiaP1 | chr2 | 55336362 | 55336767 | + | N/A | UCSC |
| ppiaP2 | chr3 | 46363831 | 46364003 | + | N/A | UCSC |
| ppiaP3 | chr6 | 52160725 | 52160887 | - | N/A | UCSC |
| ppiaP4 | chr6 | 73615733 | 73615908 | + | N/A | UCSC |
| ppicP1 | chr3 | 66642889 | 66643049 | + | N/A | UCSC |
| ppp2r3aP1 | chr8 | 40414224 | 40414562 | - | N/A | UCSC |
| psmb3P1 | chr4 | 32828173 | 32828352 | + | N/A | UCSC |
| rap2cP1 | chr2 | 121614460 | 121614651 | - | N/A | UCSC |
| rap2cP2 | chr5 | 117182413 | 117182562 | - | N/A | UCSC |
| rbm46P1 | chr2 | 31247184 | 31248282 | - | N/A | UCSC |
| rhoa.2P1 | chr5 | 143342971 | 143343334 | + | N/A | UCSC |
| rpl13aP1 | chr1 | 188580342 | 188580580 | + | N/A | UCSC |
| rpl34P1 | chr5 | 34748769 | 34749208 | - | N/A | UCSC |
| rpl37aP1 | chr2 | 97060220 | 97060580 | + | N/A | UCSC |
| rps13P1 | chr5 | 12268770 | 12268956 | - | N/A | UCSC |
| rps4xP1 | chr4 | 43107501 | 43107665 | - | N/A | UCSC |
| rragcP1 | chr6 | 87017591 | 87018019 | - | N/A | UCSC |
| rsph3P1 | chr5 | 133878472 | 133881217 | + | N/A | UCSC |
| sarnpP1 | chr1 | 9890140 | 9890552 | - | N/A | UCSC |
| sp4P1 | chr9 | 68095596 | 68095788 | - | N/A | UCSC |
| sriP1 | chr6 | 9523046 | 9523377 | + | N/A | UCSC |
| ssr3P1 | chr6 | 28498846 | 28499008 | + | N/A | UCSC |
| ssr3P2 | chr7 | 99018390 | 99018517 | - | N/A | UCSC |
| tuba3cP1 | chr3 | 84727238 | 84727528 | + | N/A | UCSC |
| tuba8P1 | chr2 | 136560089 | 136560997 | - | N/A | UCSC |
| tuba8P2 | chr3 | 84714827 | 84715012 | - | N/A | UCSC |
| tuba8P3 | chr9 | 83583331 | 83584249 | + | N/A | UCSC |
| tuba8P4 | chr9 | 84559457 | 84559742 | + | N/A | UCSC |
| znf33bP1 | chr6 | 3169327 | 3169716 | + | N/A | UCSC |
| znf432P1 | chr9 | 2747055 | 2747228 | + | N/A | UCSC |
| znf432P2 | chr9 | 4299831 | 4299989 | - | N/A | UCSC |
| znf585bP1 | chr6 | 3848649 | 3851240 | + | N/A | UCSC |
| znf706P1 | chr10 | 26954331 | 26954467 | + | N/A | UCSC |