Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snrpe
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein polypeptide E
Also known as -
Coordinate chr13:50252707-50258951
Strand +
Gene summary Enables U1 snRNP binding activity. Predicted to be involved in hair cycle and spliceosomal snRNP assembly. Located in nucleus. Part of U1 snRNP. Used to study lupus nephritis. Human ortholog(s) of this gene implicated in hepatocellular carcinoma; hypotrichosis 1; hypotrichosis 11; and lupus nephritis. Orthologous to human SNRPE (small nuclear ribonucleoprotein polypeptide E). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpe

Retroname Coord Strand Genomic Region ENSG
SnrpeP1 chr1:141503704-141504126 - Intragenic
N/A UCSC
SnrpeP2 chr1:78100959-78101116 - Intragenic
N/A UCSC
SnrpeP3 chr3:150135816-150136225 + Intragenic
N/A UCSC
SnrpeP4 chr3:153465526-153465751 - Intragenic
N/A UCSC
SnrpeP5 chr4:66332699-66333001 + Intragenic
N/A UCSC
SnrpeP6 chr6:134216173-134216469 + Intergenic
N/A UCSC
SnrpeP7 chr6:43808924-43809246 + Intergenic
N/A UCSC
SnrpeP8 chr7:69077271-69077513 - Intragenic
N/A UCSC
SnrpeP9 chr8:129371553-129371973 - Intergenic
N/A UCSC
SnrpeP10 chr11:14134107-14134429 - Intergenic
N/A UCSC
SnrpeP11 chr12:39111833-39112608 - Intragenic
N/A UCSC
SnrpeP12 chr17:74748621-74749039 - Intergenic
N/A UCSC
SnrpeP13 chr19:37532866-37533193 + Intragenic
N/A UCSC
SnrpeP14 chrX:76813335-76813499 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001271237.1
TTTGTGACTTCCACCATGGCGTACCGCGGCCAGGGCCAGAAGGTGCAGAAGGTGATGGTGCAGCCCATCAACCTTATCTTCAGATACTTGCAAAATAGATCTCGAATTCAGGTGTGGCTGTATGAACAAGTGAATATGCGGATAGAGGGTTGTATTATTGGCTTTGATGAGTACATGAACCTCGTATTAGATGATGCAGAAGAAATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTCAAAGGAGATAATATTACTCTGCTCCAAAGCGTTTCCAACTAGCAGTGGCCAAGCATGGGAGAGGTTGAGAAGGGGCTCAGGGGCTGCTGGTGACTACATTTACTCATCCTGTTTCACTTGTACATTCTCATTGGGGTAAAAATAAATGTGAGCTTGTTTTTGTTACAA