Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TRIM38
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name tripartite motif containing 38
Also known as RNF15|RORET
Coordinate chr6:25962723-25991231
Strand +
Gene summary This gene encodes a member of the tripartite motif (TRIM) family. The encoded protein contains a RING-type zinc finger, B box-type zinc finger and SPRY domain. The function of this protein has not been identified. A pseudogene of this gene is located on the long arm of chromosome 4. [provided by RefSeq, Jul 2012]

Retrocopy(s) from TRIM38

Retroname Coord Strand Genomic Region ENSG
TRIM38P1 chr4:165664349-165665735 + Intergenic
ENSG00000250725 UCSC

Expression

Transcript Sequences

>NM_006355.5
GTTAACTTCCTGACCCAGGAAGTGGCAGCAACAGAGGGGACTAGCAGCGAATATACTTTACACCAAATCTCAGAAGATTCAGAACTTAGATGAGTGGGGCCCAGGACAGGAACCCTGGAGCCTTGGAAGGAGGGGAGCCCCATCTCCCCAGAAGAGCAGTGACCCCAGCAGAGAGGGGCCTGGTGTATCACTGGAGGAAATAGCCTGCCAAGGAATACACGTCTTCAGAAGAAATTCTGTGTGGCTTCAAGAGACTGATCAAATTGTGAGAGGAAAACAGCCTACCCGgtcctcttttcttcaatacaaaatgagataataggggttggaaggaaaaCCTTCAAGACCTATGGAAGTCAGTTGCAGCCAGCTCATCACATAGAGGTGCAGGTGAGGTGTATTTTCATCACGGTGGAAAATTCTGGCTGCTTCATCTCCATCTCTAGAGCCAATATTGGAGCTTTTCAATAAAAGCTATGGCCTCAACCACCAGCACCAAGAAGATGATGGAGGAAGCCACCTGCTCCATCTGCCTGAGCCTGATGACGAACCCAGTAAGCATCAACTGTGGACACAGCTACTGCCACTTGTGTATAACAGACTTCTTTAAAAACCCAAGCCAAAAGCAACTGAGGCAGGAGACATTCTGCTGTCCCCAGTGTCGGGCTCCATTTCATATGGATAGCCTCCGACCCAACAAGCAGCTGGGAAGCCTCATTGAAGCCCTCAAAGAGACGGATCAAGAAATGTCATGTGAGGAACACGGAGAGCAGTTCCACCTGTTCTGCGAAGACGAGGGGCAGCTCATCTGCTGGCGCTGTGAGCGGGCACCACAGCACAAAGGGCACACCACAGCTCTTGTTGAAGACGTATGCCAGGGCTACAAGGAAAAGCTCCAGAAAGCTGTGACAAAACTGAAGCAACTTGAAGACAGATGTACGGAGCAGAAGCTGTCCACAGCAATGCGAATAACTAAATGGAAAGAGAAGGTACAGATTCAGAGACAAAAAATCCGGTCTGACTTTAAGAATCTCCAGTGTTTCCTACATGAGGAAGAGAAGTCTTATCTCTGGAGGCTGGAGAAAGAAGAACAACAGACTCTGAGTAGACTGAGGGACTATGAGGCTGGTCTGGGGCTGAAGAGCAATGAACTCAAGAGCCACATCCTGGAACTGGAGGAAAAATGTCAGGGCTCAGCCCAGAAATTGCTGCAGAATGTGAATGACACTTTGAGCAGGAGTTGGGCTGTGAAGCTGGAAACATCAGAGGCTGTCTCCTTGGAACTTCATACTATGTGCAATGTTTCCAAGCTTTACTTCGATGTGAAGAAAATGTTAAGGAGTCATCAAGTTAGTGTGACTCTGGATCCAGATACAGCTCATCACGAACTAATTCTCTCTGAGGATCGGAGACAAGTGACTCGTGGATACACCCAGGAGAATCAGGACACATCTTCCAGGAGATTTACTGCCTTCCCCTGTGTCTTGGGTTGTGAAGGCTTCACCTCAGGAAGACGTTACTTTGAAGTGGATGTTGGCGAAGGAACCGGATGGGATTTAGGAGTTTGTATGGAAAATGTGCAGAGGGGCACTGGCATGAAGCAAGAGCCTCAGTCTGGATTCTGGACCCTCAGGCTGTGCAAAAAGAAAGGCTATGTAGCACTTACTTCTCCCCCAACTTCCCTTCATCTGCATGAGCAGCCCCTGCTTGTGGGAATTTTTCTGGACTATGAGGCCGGAGTTGTATCCTTTTATAACGGGAATACTGGCTGCCACATCTTTACTTTCCCGAAGGCTTCCTTCTCTGATACTCTCCGGCCCTATTTCCAGGTTTATCAATATTCTCCTTTGTTTCTGCCTCCCCCAGGTGACTAAGGAAAAGAGCAGAAGCTCCTTGGTTTAACCAGCACAGAGAAAATaatataaatcccataagggcagacgtttggtctgttttcttcgctgtcatttccttagtagttagactagtgctgagattttagtggatatataattgatttatgttgaatatatggaCTTAGCAACTAAAAATACCACAGATGGTTAACCTGGACTGGGGCAAAGCAAGATAATAGTGATGATCGTATGTTGCTGTCTCCATCCGTCTTTAATGGGTCAGGGCTTTGATTTCCAAGGGTCTTCAGGTGATGAGTAGGGGTACCCACAAGTCAGAAGGTCTGCGTTCTCCTAGTTTGTTTGCTGCCATTTGAACTCATGTAGGGAATGAAAGAAAGCTGCAATTATCCGCCAACTGCATTTaaaacaaaacaaaacagaaaaatcaaaataaCATTGACTCTTCCAACCACTGACATGTTGTTTAATAATCTAAGCGGCAGTCCTGGAGGCTACCAGACTTACTGAGTTCTACCTGAGAAACAGCCAAGCAAAGTGTGAGAGAAGGGTTAAGACTGGCTTACAATGAGATGCTTCAAATGAAAAGGGAATTATGAGTAAAATTGAACTTTGATGGGGGATTCAGTTCTGGAAAAGAATTTGGTATTTTCCAGTCTGCTAGGACCAATTACCTTGAAATATTTTAAAATCTCAGTAAATAGTTATTGCTGAAATGGCTGTTGGCAGTTCTTATTATGATTCAGAGAAGAGCAAATAGACCTTAACTTCATTTTGAAAAAGACCAAATTACCATACCCGAGTGAGTAATGACAGGACTACAACTAAAACATAAACAACATTAATGATGACCATAAAAAGTCACAAAATTGCTAAATGTTATAATTTAGAGTTGACATAAAAATTGATggccaggcatggtggctcacgcctgtaatcccagaactatgtgaggctgaggcaggtggatcacttgaggtcaggagttcaacaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggtaggggcctgtaacccagctactcgtgaggccaaggcaggagaattgcttgagcctgcagcagctgcagtaagccaagatcatgcTGTGCCTCAAGGAAAAAAAAAATTAATGTTTACTGATATTTGTTGAAGTCCTACAACATCACCTCTGAGAATAGGAGAAATGAAGCAACAGTTGTGTCTAGATGTCAGAGGCATGGCTGGGCCTCCATCTCTGCCTAAGGGAGATATAAAAGAGTTCAAACTATTGCCCATGTTCCCCAGGGTCAGAAGTTCTAATTATGATGATAGAGGCTGGGTTGTAAGTAGTAAGtgaagggtagcagaatatgccatctttggcataagaagtattttgagttgaagacaattgagaaaaaaaatagattaaaaacaaacaaacacctctgccctctccctatttgcctaaaagcaggatatgaaattgtgaaggtgtcttcttactcggggaagaacaaaagttagtcaccagagactttagactcttatcagcctggacatagcaccagagaagtctttttttttaaaaaaaaaaaaaaaaaaagggaaagaaaaagttgccttcccacaatttactgcactagaaactcaaagtccttttcgtcttccttgtcacttaaaaaatgtattcttttcttaaaatgctatataagcccaagttctaaatcctcttttgagtattcatctcagtactcccctgtgtttgtacaatgcacatgctttgtttctgtcttgtcaatctgtcttttgttagtctacttgatagggccacagatggagaacctaagatgaatagaaaaaaaagatttttctccccaacaGAAGGATTATCGCCAGTTGCACTTGTTCTATATACCCGTAGTCTCGGTATGCTGACCCAGACTTGGGTAATAGGACCCAGTGGGTAACCGAGGAACCCCACCTTTGTGCAGGATCAGTGAAGATGTAATCTGGATATTCATAAGCTCTTCTCTACCTCTTGGCATCCCACAGTCCTGTGTTAATGTAAGTGTGGTCTTCCCCAGAAAGGGGAGGCCTCCCTAACATTGTTAAAGCCTAGCATATGCtgcttagaggaaattctatatccctaagcacttagattgctgaataagaaagaatgataataaaataaacaattaaataaaagttttaaaaaatgaataaaataaacctgtggaaactataaggaaggccagaagaaatataaaattggagattaatTGGGGTGCAGGAAAGTTATGGAAAGAATATAAGTCCTGCTAGATAAATCATTAGCTATTTTAATAAAGAAtacagaagaaaataggaacaaaagaatatatactggaataattttgagagtaatttgaagaattagatgcaaataaatttgaaaacctttaaaaagaaaccaatggcctaactgacccaagaagggaaagaaaatctaaacagactgataaATACAAAATGAAATTCAGACACTTACAGAGCAgccaggcatggtggctcacacctgtaatcctgtcactttgggaggctgagatgggaggatcacttgaggctaggagtttgagactagcctgggcaaggctcccatctctaaaagaaaagaaattagctgggcatggtggcatgtgccttagtttcagctactcaggaggctgagacgaggattgcttgagcctaggagggcaaggctgcagtgagccatggtcatgccactgaattccagcctaagtgacagagcaagaccttgtctcaaaaaaaaaaaaaaaaaaaGTTACAGAGCTCCAACTAAATAATGTGGGGAACAAAAGAAAAAAGAAGATGATTTTATGGCTGATTTTTTTTTTAAGGAAAAGCAATTCAtgtacccttgaagattagattaagttctataaaatagcccaaaatgacagtggctgaaacaagtttatttctctcccatttaaagcaagtctagatgtggaagtctgggaagcccagaaaatccaggtcttgtttgtgtatggaaactccagaaaatcacagattccttccagccacccctcaattacccctgggatccaagagagccactaaagttccagccatcatactcacaacccaagttgtaggatggaaaaaaggacacaaaagtagggtgaagagcatgtgtgcaacagctctcttttactctagtgtcctaaaacctatcataaaacctttggcttgccttgcattagccagaatttagtacatggccacacttaagaagtcagaaagattagctttttttccagggtagttggctgaaaatcaggagttctcatattaaaaaacagagaagggacatcgaatagatgaccaacaatctccttcacaCTCATACTATTTAAACTGTCCTAGTCAATGACCAAAAAAGAAAAGCCTACAAACTCATTGATATAAAAGCTTAACAAAGGTACTCCCCGCCCCCCGCCCGCCACACACCATCCCCAAAAGGAAATTTCTAATCCAATTAACAgtcttaggttgggctgctgaaacaaaataccacagcctgagtgacttaaacaacgacaatttatctctcactgttctgaggtctgagttgattctttgtgaaggccctttcctagcttgcagatggctaccttcctgctatgtcttcacatggcaaagagagagctagctttctggtcttttcttataagggaccagtcccatcatgcccatcatgaagactcgatctgctaggatctcaactaaacctaactatcacccaaagagcccacctccaaagaccatcacattgaatgtgagagtttctacatatgcattgtgggaaacacaaacatttacttcaACTGTAACTATTGAAGCAAAAATGTCcccccaccatagacatccagcaccacagtagtacatttattacaattgaacttacattgacacgtcattatcaacgaaagtctgtaatttacattagggtttattcttggtgttgtgctttctatgggttttgacaaatgtataatgtcatgtattcaccattatagtatcacagaagtttcactgccctaaaaatcctgtgttctgccttttcaacacttcctgtcacccaatttctatcaactaatcttttgactgtgtccatagttactgtcttttctagagtgtcatacagttgtgaagcaggaagcaggagtgaactccggaggcagggactttactccggaccagattgaagactagccgaaacagggacgaggttaaagcacctctccataagacacgcccaccagcgccatgtcagtttttcgttgccatggcaacaacaggacattatcgacttctttcctctgtacctactccgaagttaccactctttttctagaaatttctgcataatcccccttaacatgcacttaactaaaagcaggtatattactgcagaactgcccctgagctgctactctgggcacattacttatgggttagccctgctcagcaaggagcagtacctgttctgctgttgtacactgctgcttcagtaaaagttgctaacaccaccacttcacccttgaattcttcccgggctaagccctaatttttggcttgcttgccctgcatcagttggagtcatatagtatgcagtcttttcaggttggctttttagtaacatacatttaagtttccttcatgtgttttcatggcttgatcgtttcttttctttttctttttcttttttcttttctttctttttttttttttttttgagacagaggagtcttgctctgttgcccaggctgaagtgcagtggcactggctcactgcaacctccatctcccaggttcaaacgattctcatatctcagcctcccgagtagctgggattacaggctcacgccactatgcccggctaattggggttttcccatgttgaccaggctggtctcaaactcctggcctcaagcaatccacccacttcggcctcccaaagtgaatgcatttctttttaactctaaataacattccattattcagaagtaccacagttatccacttacctactgaaagacatcttgtttccaagttttggataaattatgaataaagctgctataaacatctatgtgcaggtttttgtgtggagataagttttcaattcctttggataaatactaaggagtgtgattggtgaatcttatggtaaaagtatggttacttttgtaagaaaccaccaaactgtcttccaaagtgattgcacattttgcattctcaccagtaatgaacaagttactattgctacatatctttgcaacctttggtgctgacagtgttctaaattttggtcattctactaggtatgcagtggtatctacttgttttaatttgcagttccctaatgacatgatgtcaagcatcttttcatatgcatacttgcatctgtgtatcttctttggtgaacagatgttcaggtcattggcctgctttaaatcaggttattttcttactgttgagttttaagtattctttgtatattctaaaaatattgttcttcatcagatctgtcttttgcaaacattacctgccaatgtgtggcttttcttcaacacttctttgtaaatttgcaagtcctttgagaaaagaaatgcacccaaagtattaatttggcaatctcatatcacgagagtactctaaagctaaataaattacagtttttcaaattttgaattaattgatctttgctattgttagcaaggtcttgtattcttttttttttttttttttttttttaatagagacgggtcttgctacagtgcccaggctggtctcgaactccaggcctaaaatgatcctcctgccttggccttccaaagtactgggattacaggcataagtcaccacgctcagccatctggtattctttagcaactgtttggtaacttaatctttcactttttgaaaacaaaaaatagtttttttctcatagttttctaacaaaatcttcataactgaaataatttctctttatcacctcttcttataaatatggttttctttttttaaataaaaatttaagacattttataactggccaaatttactagcttagatactattagatagtcaatattttttgttggatatttgatttttatttcaggcaactaatatctattcatttttgcactgttggaagaaaattactgatcaaattcactatgtatttgcagaaaatggctttcaatattgtctactttatcatcctttttttttTTttctttcttcctttttagatacagggtctcactatgttgcccaggctggtctccaacttctgggctcaaacaatcctccctccttggccttccaaagggttggATATGTTTTATCTacagttttgttgttttgttctgctacaggatatttgcaattgccatttatcatgaaattcatgacataccttcttccactctcctttttatctttattgttctggttataggactagctttgcatctctactcaattctgtatcagtagtatgctttcattttaaattttaagtttgtccatatgtatattgacacagggtcttgctctgttgcccagactggagtgcagtggcaagatcagggctcactgcagccttgactgcctaggctcaagtcatcctcccacctcagcctccagaatggctgggactacaggcacgcaccaccacacatggctcatttttttgtattgagacagggtttctccatgttgcccaggctggtcttgaactactgggctcaagcaatcctcccaccttagcctcccaaagtgttgggattacaggcttgagccaccatgcctcgcttctacacttatttttaattctaaaataatttataataataaatattaacaattagatttaattactgataaatattaaatgttaaataggttttattaaataattaaataaaaatgaaaataatcagtatttcaatttaattactaattataattcacagttatccttgtaactcctaatgtctatataaaagatttttatattttttaattcttaaaattttattatttatttCACACCAGGCCATCACTGTGATACATTTTTTAAAACACATTAAATTATCACCAGAAAAGTGCTGTGATGGAAAATATAAATTGAAATACCTTTTCTGGTTAGGAGAGTAATTCTGTTTTTCTGATAGAGAATAGAAGAGTCCTTCAGGCCCCTCCAAACTGTCATATTCCGGGCATCGGGTGTCCCCATCCTCACTTCAGTCCACAGGCAGGGTCCTCAGTCTTCAGCGCTCCTTCTCTTTCCCCTttgtcttgtgtctccttgggtctcttttctccaagacctaaactccctgaggacaggactattttttacatcttgatgtcactcctgagcacttgCTTTAATGTGTTGGACACTGGGTCCATTAAAGATTGTATGTGAAATTATAAAA