Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SYNCRIP
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name synaptotagmin binding cytoplasmic RNA interacting protein
Also known as GRY-RBP|GRYRBP|HNRNPQ|HNRPQ1|NSAP1|PP68|hnRNP-Q
Coordinate chr6:85607784-85643862
Strand -
Gene summary This gene encodes a member of the cellular heterogeneous nuclear ribonucleoprotein (hnRNP) family. hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA) and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. The encoded protein plays a role in multiple aspects of mRNA maturation and is associated with several multiprotein complexes including the apoB RNA editing-complex and survival of motor neurons (SMN) complex. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 20. [provided by RefSeq, Dec 2011]

Retrocopy(s) from SYNCRIP

Retroname Coord Strand Genomic Region ENSG
SYNCRIPP1 chr20:6213536-6215689 + Intergenic
ENSG00000234241 UCSC

Expression

Transcript Sequences

>XM_005248635.4
GAACTGGATCGGGTTTGCTGCCAGCGGCGTGAGCTTCGGCCGCCATTTTACAACAGCTCCACTCGCGCCGGACACAGGGAGCAGCGAGCACGCGTTTCCCGCAACCCGATACCATCGGACAGGATTTCTCCGCCTCAGCCCAACGGGGAGATCTCTGGAAACATGGCTACAGAACATGTTAATGGAAATGGTACTGAAGAGCCCATGGATACTACTTCTGCAGTTATCCATTCAGAAAATTTTCAGACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATGAAATTTACGTTGCAGGGCTAGTTGCACATAGTGATTTAGATGAAAGAGCTATTGAAGCTTTAAAAGAATTCAATGAAGACGGTGCATTGGCAGTTCTTCAACAGTTTAAAGACAGTGATCTCTCTCatgttcagAACAAAAGTGCCTTTTTATGTGGAGTCATGAAGACTTACAGGCAGAGAGAAAAACAAGGGACCAAAGTAGCAGATTCTAGTAAAGGACCAGATGAGGCAAAAATTAAGGCACTCTTGGAAAGAACAGGCTACACACTTGATGTGACCACTGGACAGAGGAAGTATGGAGGACCACCTCCAGATTCCGTTTATTCAGGTCAGCAGCCTTCTGTTGGCACTGAGATATTTGTGGGAAAGATCCCAAGAGATCTATTTGAGGATGAACTTGTTCCATTATTTGAGAAAGCTGGACCTATATGGGATCTTCGTCTAATGATGGATCCACTCACTGGTCTCAATAGAGGTTATGCGTTTGTCACTTTTTGTACAAAAGAAGCAGCTCAGGAGGCTGTTAAACTGTATAATAATCATGAAATTCGTTCTGGAAAACATATTGGTGTCTGCATCTCAGTTGCCAACAATAGGCTTTTTGTGGGCTCTATTCCTAAGAGTAAAACCAAGGAACAGATTCTTGAAGAATTTAGCAAAGTAACAGAGGGTCTTACAGACGTCATTTTATACCACCAACCGGATGACAAGAAAAAAAACAGAGGCTTTTGCTTTCTTGAATATGAAGATCACAAAACAGCTGCCCAGGCAAGGCGTAGGTTAATGAGTGGTAAAGTCAAGGTCTGGGGGAATGTTGGAACTGTTGAATGGGCTGATCCTATAGAAGATCCTGATCCTGAGGTTATGGCAAAGGTAAAAGTGCTGTTTGTACGCAACCTTGCCAATACTGTAACAGAAGAGATTTTAGAAAAGGCATTTAGTCAGTTTGGGAAACTGGAACGAGTGAAGAAGTTAAAAGATTATGCGTTCATTCATTTTGATGAGCGAGATGGTGCTGTCAAGGCTATGGAAGAAATGAATGGCAAAGACTTGGAGGGAGAAAATATTGAAATTGTTTTTGCCAAGCCACCAGATCAGAAAAGGAAAGAAAGAAAAGCTCAGAGGCAAGCAGCAAAAAATCAAATGTATGACGATTACTACTATTATGGTCCACCTCATATGCCCCCTCCAACAAGAGGTCGAGGGCGTGGAGGTAGAGGTGGTTATGGATATCCTCCAGattattatggatatgaagattattatgattattatggttatgattaCCATAACTATCGTGGTGGATATGAAGATCCATACTATGGTTATGAAGATTTTCAAGTTGGAGCTAGAGGAAGGGGTGGTAGAGGAGCAAGGGGTGCTGCTCCATCCAGAGGTCGTGGGGCTGCTCCTCCCCGCGGTAGAGCCGGTTATTCACAGAGAGGAGGTCCTGGATCAGCAAGAGGCGTTCGAGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGGGAAAAGGGGTCGAGGCCGGTCCTGACCTGTTACAATGAAGACTGACTTGCTATGTGGGATTACACCAGAAGCTTGCAGTGGAGTAATGGTAAGGAAATCAAGCAACCTTAAATATGTCGGCTGTATAGGAGCATATTCTATTGCAGAAGACCTTCCTATGAAGATCATGGAATCAAATACGGGACATTGAACTAATACTTGGACTTTGATATGAATTTCTTTAACAATTTTCTCTGCAGTGCAAGTTATTAAACTAAAGCTACTCTATTTTCAAAATGTGTTCCAACAGAAATCCTTCATAACTCCTAGCATGGTATCTTAATAAAGAATAAAGTTCTTTTAAAAATCTGCTCTAAGTAGATTTTTCCCCTTTTTTAAATTAAGGATCCCAACAGTGGTATTTTGAAATATTCTCTTGAATTTGTGCATTTAAATTTTATTGCAGTGGTATAGATGAATGCCACTGATGGTATCCTTAAATTTTATTTCTGCTCACCAAGGTTAATCATGATTGTCTATATCTTTTTTATAGTGATCACTTTTGAATTGTGTTCAGATATGCAGTTTCAGGTGTAATCATCAGAGCTGGTTAGTCAGGCATTCCAGATAGTGGTTCTTTTCAGAACCTTTTTAAAAGGGTTGGTTAACTACCTCAGTAGCAGAGGATTGAACTATACCCTGTCTGTACTGTACATAGAAAATCTTTGTAGATAAAAGCAAGGCTTGTTAAATATGATATGAGGGTAAGATTTTAATATACCAAATGTAACATTCTTAGTTGCCTTTAGTTTCAGAGGCTTGTAAGACTTCCTCATGACCATCATAACAGGCCTTGCTTTTGTCGTATTTTGTGGCTGAAAAAGCAGCCTTGCTTCTTCAGATATTGTAGTTATTTGGATGTATAATAGTTTAGCAAGATGTTACTTTTGTAAGACATCAGATGTTCAAAAAAGTGCATCCGAACTTGTACTAAATACTGCAGTGTCCCTTTATAAAAAGTCAGACTAAAACTGACAATTGTACAGCGAAGCCTGACATTTGGATATTTTGAAGTTTTTTCATAAATCATAGAAATTAGTATATGGCTGTAGTTTAGCTTTTTAGGTAAAAGGTATGTTTCATTAGTGCATTTCTTCCTGCTGATCACTGTAAACATGTGAATCAGCTTTCCATTTCTTATGCAGGTCATGATAACTTGTAGAGTAGAGTACAATCATTTGTGCTATGTTTTTAATTTTCTAAAGCACCTTGATGACAGTGAGTGTCCAGTGGTGAAGCATCCTCTATTGAACCACCCTCAAAAATTTTTTTGCCAAGTCCTAAGTTGATAGCTTAAAGTAAAAAGTGAAAATTATAGTTTCATTAGGACTTGGTGTAAAGAAATCCCCTCCCCCCTTCCCCAAAGGGATACTGCAGTTATATCACATACCCAATAGGCACCACGATGAAGATCAGAGCTTATACTTAATTAAGGTTTTATACACACCAGTTCCCCAGTAAATGCAAATTTAACAAGAAAATCAGACATGTCATATGTTCAAAATGCTCATGGCAAACAATCATTTTGCATTCCTGCAAATAAAATTGTTTTATACTGTAAGCTGGAGGCGAGTGTAACTTATTTTTGTAATAAAGTTTTTATTTTTTTTATGTGTCATTAATATAAATGTGTGTTAGTGTAGAAATCTTCTGGTTTAAAAACTTAGAATTGCACACATTTCAGTATGTTTATTTGTACTTACATAATTTTAGAATAGTGGTTGCCAATAGCCTGTATGTTTCACATTAATTGGTTTTTTGTTATCTAAATAAATCATTTTAGTATGTTGTATGTCAGTTACTGGGATAGCTGGGACATAGAGTGTAATTTAAAATTTGTCAATAAGTATTCATTGGAATATATGTAAATGTGCCTTGCCGGTTATTGAAACTTATCTACAAAATGAGTATGGGGTGACAAAAATTAGTTCCTGGTGCTTAATGAAACTTTCTGCCACTGATTTTATATATTACCCCGTGCTTTTTTAAAGTACATCTCTCTCAAAACTTAGTGTAAGTTTGAGGGCTACACAAAACATTTACATTTCATTCTAACATAATGAATATAATAGGTTGTGGAAAGTGGGTAAACTAAATGTAGCCTTCAGTAAAATTGAATCTCAGTGTAATCCTTGGTGCTGGCATTTCTCAGTTCCGAGGAGTTAAATGATCCCATCTAAGAGGTCATTGCCATGCCTATTGGCACTTTACTGTCATAGCATTTTTAAGGGACACTGTCAAGGTGTTTAAGTTCTCAGAATTACTTGTTGGGATTTTAGGACAGGTTTGTTTACTTAAAGTAAGAACTGCATTGTCAAAGTTGAAAGAGGAACACTTTTGTGAGTTCACAAATGTGTTCTTAAGAAAACATTAAAATATGGAGCTCTGGGTTTTCAAGACTATTTGGCATTCTTAATTTGGGGACTTGGGAGGGAAACTGATAAAAAGAAATTGAAGAATTGATGGTTATACTTAAAGAAGGGTAATGTAAACAGTGGTGATGAAATATATACACATCAAGTGAAATTACTTGACAGTGTTCATTTGAATGACTTTGAATTCAAGCCATTATAATTACTTTTAAAATTAAATATCATTTGCACTGTTCTGATAATGGGTGCAGTTTTTGAGCAATATAATCAGAGCTAAATATGCATGTAGTGATTAGTGATGTGAACAATTAACGTTCTGAGAAGAAATACTAACTGTGGTATTTTCAAACTTAAATTTCTGTAGTAAAATCAGTATCAAAGTCTTATCAGATCAAGGAAAAACAGGCAATGCATATAAACATACTTTTGAATGTTGTGTGGCCTATAAAGCAATAATGCAATTTATATGGAATGTCATGGGATATGAGAAATGGAAATGCAAAAATAACTAATCCTTTAGTAAAAATGTCAACATGTTAAAGGGGGAATGTTAACTAATGTAGGTTATTGCTATTTGTGATTTGTTTATGGGTTCTTGGCTTTGACAGCTTCAAAGAATGGACAGTGATAAGTTAAAAGAAATTTTGTATATTGTCAAGGAAAGGGTCTTAAATCCGAGTCAAGTCCCTTCCTTGGGGTAAAAAATGTATTCTTAAAGCATTCTGATGTTAAAAAGAAAACTTAAGTTATCTAACCAAAACAGACGCAAGATTTTGTTTCTGCAGACTACTTGGCAATCAAAAGTGATCATAAATTTAGGTTATCAGTTTTCAGAAAGTTGCTTTGTGAGAAAATTTTGTTAGATATATTCTCCCAAGCATGCTTTTTGTGGAAGGTTTTCAGCCATTGCCACTGAATCAGATGTTAAAAATGAAGGGAAAATTGAGTGTGCACACACACAACTGTTGTACACTCATGATTGCAGTTTTTAGCTTAAGAAACTTTTCTACCAGTTACTGTGAATCTGACTTAAAATGTAAAGTTTCCTCATGATAAAATAGGAACAACATAGAAATGGATTGATGGGGTGATCTGAGTTATTGTATATAAAAGTTTTTAAAGAATAGAATGAACATCAAGCTAGATAGGCAAAAATTGACACATTCAGAACAGCTTTTTTGACTGCGAAGCCAAAAGTTGTCAGAAACAGCAAAAGATCCCTTATTATTACAGAGTATTTTACGTAGTCTCTATTTTAAGGAGAGAAATTAAATAGAAGGGCTTCATGCATTTAGGGGAGGGTGCTAAAACTTCTCAAGTTCGTCAAACTTACAGGAATACCCACCATGATCATTTTCTCTCTAATTATGTATACCACAAAATTTTCATCTGGCCATAGGAATTCACTGGTGGGTGTAAAATTAATGACTAAAGAAATTAAGTGACAAATACATAAAAGAAACAGACTTGTGGGGATATTGTTTTAAGGTGTATTAATTACTCAGTGATGATACCACTCAATAGGGCATGCCACTACTTTTCTTAAGATGCTAATTATGAAGCAGTGCTCACAGGCATTTTTTAACTAGCAAATTAGTAGATGGACTTTTGGGGTCTGTCACTTTTTAAAAGTATTTAAGACTTAAATTCTATTAGCACCACAGTCTGCCTTCAGTAATACACCTAAAATATTTTTCAGGACCAGAAGCATTCAGTTTGAAAATTTGCAGATGCAAACCAGTATTATTACTAACGCTCTGGGTCAAAGATTAGGTTTTTAATATTAACAGTAGTCTGGTAAATATTTAGAAGTCTGGCATTGAGAAACAAAAGCTTGTACCTGACTAGTATTTTTATTTAAAAAAATTAGTTCTGTTAGCTTATTTAAATTGTGTTTTATTTATCCGTAGAATTTATATTTATTTCATTCCTTTCATCTCACTGAAAACTGTCTGCAGGCCCTTTGATTTGGATTAGATGTGTGAAGTACTGTCTTTTGCCAAAAACCTCAAATTACCTGTTCTTTTCAACGTAGTGGGTTTGTGCTTGTTTGGAGATCAGTTCAAAAACTATCTGTACTATCTGTACTGCCTCTGATGTTAAGATTTTATGTATAGCATAAGGAAGCTAGCTCTGACTATATTTTCCTAAGAATAAAGACCTATTTTTGTAGCATG