Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name HMGB1
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Microcebus murinus
Full Name N/A
Also known as -
Coordinate chr13:75477089-75482005
Strand +
Gene summary N/A

Retrocopy(s) from HMGB1

Retroname Coord Strand Genomic Region ENSG
HMGB1P28 chr14:69667217-69668434 + Intragenic
ENSMICG00000006213 UCSC
HMGB1P36 chr16:52926615-52927810 + Intergenic
ENSMICG00000004519 UCSC
HMGB1P34 chr16:3995959-3997133 + Intragenic
ENSMICG00000006606 UCSC
HMGB1P1 chr1:27297088-27297739 + Intergenic
N/A UCSC
HMGB1P2 chr1:43545680-43546849 + Intergenic
N/A UCSC
HMGB1P3 chr1:58262907-58264161 + Intergenic
N/A UCSC
HMGB1P4 chr2:111154025-111154180 - Intragenic
N/A UCSC
HMGB1P5 chr2:97670100-97670921 - Intergenic
N/A UCSC
HMGB1P6 chr3:106508855-106509414 - Intragenic
N/A UCSC
HMGB1P7 chr3:118704221-118705417 - Intragenic
N/A UCSC
HMGB1P8 chr3:15844205-15844889 + Intergenic
N/A UCSC
HMGB1P9 chr3:92722016-92723215 + Intergenic
N/A UCSC
HMGB1P10 chr4:19709069-19709507 - Intragenic
N/A UCSC
HMGB1P11 chr5:101863931-101864309 - Intragenic
N/A UCSC
HMGB1P12 chr5:3244783-3245906 + Intragenic
N/A UCSC
HMGB1P13 chr5:46695027-46695661 + Intergenic
N/A UCSC
HMGB1P14 chr6:104565911-104566320 - Intragenic
N/A UCSC
HMGB1P15 chr6:93643701-93644581 - Intergenic
N/A UCSC
HMGB1P16 chr7:17560494-17561673 - Intergenic
N/A UCSC
HMGB1P17 chr7:29018439-29019597 - Intragenic
N/A UCSC
HMGB1P18 chr7:91464961-91466107 + Intergenic
N/A UCSC
HMGB1P19 chr7:94011653-94012827 + Intergenic
N/A UCSC
HMGB1P20 chr8:152426385-152426906 + Intergenic
N/A UCSC
HMGB1P21 chr8:43959013-43959293 - Intragenic
N/A UCSC
HMGB1P22 chr9:114966037-114967592 + Intergenic
N/A UCSC
HMGB1P23 chr9:71217420-71217565 - Intragenic
N/A UCSC
HMGB1P24 chr12:15979194-15980715 - Intragenic
N/A UCSC
HMGB1P25 chr12:55787329-55787877 + Intragenic
N/A UCSC
HMGB1P26 chr13:2380260-2381391 + Intergenic
N/A UCSC
HMGB1P27 chr13:33718724-33719593 - Intergenic
N/A UCSC
HMGB1P29 chr14:83184233-83185091 + Intergenic
N/A UCSC
HMGB1P30 chr15:1503011-1504184 + Intergenic
N/A UCSC
HMGB1P31 chr15:21746800-21747601 - Intergenic
N/A UCSC
HMGB1P32 chr15:24136236-24137045 + Intergenic
N/A UCSC
HMGB1P33 chr15:49554314-49555605 + Intergenic
N/A UCSC
HMGB1P35 chr16:45718909-45720088 - Intragenic
N/A UCSC
HMGB1P37 chr17:38554897-38555965 - Intergenic
N/A UCSC
HMGB1P38 chr17:39152701-39153674 - Intergenic
N/A UCSC
HMGB1P39 chr18:22474907-22476440 - Intragenic
N/A UCSC
HMGB1P40 chr18:35740759-35741951 + Intragenic
N/A UCSC
HMGB1P41 chr19:12828828-12829657 - Intragenic
N/A UCSC
HMGB1P42 chr19:18172979-18173708 + Intergenic
N/A UCSC
HMGB1P43 chr19:63388064-63389206 - Intragenic
N/A UCSC
HMGB1P44 chr19:65561342-65562450 + Intergenic
N/A UCSC
HMGB1P45 chr20:15836610-15836838 - Intragenic
N/A UCSC
HMGB1P46 chr21:17356242-17356981 - Intragenic
N/A UCSC
HMGB1P47 chr23:25517748-25518387 - Intragenic
N/A UCSC
HMGB1P48 chr24:6037127-6038002 - Intragenic
N/A UCSC
HMGB1P49 chr26:12244106-12245256 - Intergenic
N/A UCSC
HMGB1P50 chr26:24708916-24710082 + Intergenic
N/A UCSC
HMGB1P51 chr27:10434522-10435324 + Intragenic
N/A UCSC
HMGB1P52 chr27:20943123-20943893 + Intragenic
N/A UCSC
HMGB1P53 chr27:9428455-9429600 + Intragenic
N/A UCSC
HMGB1P54 chr28:9247141-9247794 + Intragenic
N/A UCSC
HMGB1P55 chr31:34759439-34760640 - Intragenic
N/A UCSC
HMGB1P56 chrX:70981153-70982328 - Intragenic
N/A UCSC
HMGB1P57 chrX:7554008-7555126 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>XM_012746526.2
GTAATGTTACAGAGCGGAGAGAGTGAGGAGGCTGCGTCTGGCTCCCGCTCTCACAGCCATTGCAGTACATTGAGCTCCATAGAGACAGCGCCGGGGCAAGTGAGAGCCGGACGGGCACTGGGCGACTCTGTGCCTCGCTGAGGaaaaataactaaacatgggcaaaggagatCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGCCGGGAGGAGCACAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGaagtgctcagagaggtggaagACCATGTctgctaaagagaaaggaaagtttgaaGATATGGCAAAGGCGGACAAGGCCcgttatgaaagagaaatgaaaacctatatccctcctaaaggggaaacaaaaaagaagttcaagGATCCCAATGCACCCAAGAGGCCTCCttcggcctttttcttgttctgttctgaGTATCGCCCTAAAATCAAAGGAGAACATCCTGGCCTTTCCATTGGTGATGTTGCAAAGAAACTGGGAGAGATGTGGAATAACACTGCTGCAGATGATAAGCAGCCTTATGAAAAGAAGGCTGCAAAGCTGAAGGAAAAGTATGAAAAGGATATTGCTGCATACCGAGCTAAAGGAAAGCCTGATGCAGCAAAAAAGGGAGTCGTCAAggctgaaaaaagcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaagaggaggaggaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataagtTGGTTCTAgcgcagttttttttttcttgtctataaagcatttaacCCCCCTGTACACAACtcactccttttaaagaaaaaaattgaaatgtaaggctgtgtaagatttgtttttaaactgtacagtgtctttttttgtatagTTAACACACTACCGAATGTGTCTTTAGCTAGCCCTGTCCTGGTGGTATTTTCAATAGCCACTAACCTTGCCTGGTACAGTATGGGGGTTGTAAATTGCATGGAAATTTAAAGCAGGTTCTTGTTGTGCACAGCACAAATTAGTTATATATGGGATGGTAGTTTTTCATCTTCAGTTGTCTCTGATGCAGCTTATACGAAAATAATTGTTGTTCTGTTAACTGAATACCACtctgtaattgcaaaaaaaagttgcagctgttttgttgacattctgaatgcttctaagtaaatacaattttttt