Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name NUP50
Plot displaying the genomic locations of a parental gene (in chr22) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name nucleoporin 50
Also known as NPAP60|NPAP60L
Coordinate chr22:45163925-45188017
Strand +
Gene summary The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins are the main components of the nuclear pore complex in eukaryotic cells. The protein encoded by this gene is a member of the FG-repeat containing nucleoporins that functions as a soluble cofactor in importin-alpha:beta-mediated nuclear protein import. Pseudogenes of this gene are found on chromosomes 5, 6, and 14. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from NUP50

Retroname Coord Strand Genomic Region ENSG
NUP50P1 chr14:64596891-64601951 - Intergenic
ENSG00000259010 UCSC
NUP50P2 chr5:20301204-20305825 - Intragenic
ENSG00000214132 UCSC
NUP50P3 chr6:25139663-25141641 + Intergenic
ENSG00000219682 UCSC
NUP50P4 chr6:74849239-74849530 - Intergenic
ENSG00000219736 UCSC

Expression

Transcript Sequences

>NM_007172.4
GCCGGCGCGCTTGCGCAGTAGCTGAACGCGGGCGTTTCTTTCCTCCCTTTTTTTCGAATTGGTTTTGGGGGTAGATTCGAGTTACAAAATGGCCGCCCGGAGCGTGTTCGGCGCGGTTCCCCCAGCTGTCTCTGGCTGAACCGGCGCTCTCGCCTCCCTGCCGAACACAGCGTGAGGAGCCCCCCCAGGGATATGGTGTTTGAGTCTCTGGGCTTGCCGAGCACTAAGTCCTCTGAGTTCCGCAGCGCAGCACCGGAAGCGGCCGAGCGCGCTCAGCCCGGCGACCCCTGCGGGCTCCAGACCCCTGCGCCGCTGCGCCCCGGGTTTCGCCGCAACCAAGACCCAGCGAGTGCAGCGGCGGCCGCCGAGGAGGTTCGAAAACATGGCCAAAAGAAATGCCGAGAAGGAACTGACAGATAGGAATTGGGATCAAGAAGATGAAGCTGAAGAGGTGGGAACATTCTCCATGGCCAGTGAGGAAGTCTTGAAGAATAGAGCCATAAAGAAAGCAAAGCGCAGAAATGTTGGATTTGAATCTGACACTGGAGGAGCCTTTAAAGGTTTTAAAGGTTTGGTGGTACCTTCTGGAGGAGGACGCTTTTCTGGATTTGGTAGTGGCGCTGGAGGGAAGCCTTTGGAAGGACTGTCGAATGGAAACAACATAACCAGTGCCCCTCCCTTCGCCAGTGCAAAGGCAGCGGCAGATCCCAAGGTAGCCTTTGGTTCTCTTGCTGCAAATGGCCCTACCACCTTGGTTGATAAAGTTTCAAATCCCAAAACTAATGGGGACAGTCAGCAGCCCTCCTCCTCTGGCCTTGCTTCCAGTAAAGCTTGTGTCGGAAATGCCTATCACAAGCAGTTGGCCGCCTTGAACTGCTCCGTGCGGGATTGGATAGTGAAGCACGTGAATACAAACCCCCTCTGTGATCTGACACCTATCTTTAAAGACTATGAGAAATATTTAGCAAACATTGAACAGCAACACGGGAACAGTGGCAGGAATTCTGAAAGTGAATCTAACAAAGTGGCAGCTGAAACACAGTCTCCTTCCCTTTTTGGCTCAACAAAATTACAGCAAGAGTCAACGTTTTTGTTTCATGGCAACAAAACTGAAGATACACCTGACAAGAAGATGGAGGTGGCATCTGAAAAGAAAACGGACCCATCATCACTAGGAGCGACAAGTGCCTCATTTAATTTCGGCAAGAAAGTTGATAGCTCTGTTTTGGGCTCATTAAGCTCTGTCCCCCTGACTGGATTTTCTTTCTCCCCTGGAAACTCCAGTTTATTTGGCAAAGATACTACCCAGAGTAAACCAGTCTCTTCACCATTTCCCACTAAACCATTGGAGGGCCAAGCAGAAGGTGACAGTGGTGAATGCAAAGGTGGAGATGAAGAAGAGAATGATGAGCCACCCAAAGTAGTAGTTACCGAAGTAAAAGAAGAAGATGCTTTTTACTCCAAAAAGTGTAAACTGTTTTACAAGAAAGACAATGAGTTTAAAGAGAAAGGCATAGGTACTCTGCATTTAAAACCTACAGCAAATCAGAAGACACAGCTTTTGGTGCGGGCAGACACCAATTTAGGCAACATATTGCTGAACGTTCTGATTCCACCCAATATGCCATGTACGCGAACAGGGAAGAATAACGTTCTTATCGTCTGTGTTCCAAATCCACCAATTGACGAGAAGAATGCCACCATGCCAGTCACCATGTTGATTCGGGTAAAAACCAGCGAGGATGCAGACGAGTTGCACAAAATTTTACTGGAGAAAAAGGATGCCTGAACACGCAAAGTCGGCTGCAGAATTATTGCCAAGTTGCTGCTGCTTCCACCGCCCCTTAAAGTTAGTCAGTTTTTCTTCTCTTCTTTGACATTCTAAGAACTTATAGATAACTTAAAACTTTTGTGAGGAAGATTAATGTGGCCAATAAAACCTTTAAATGTTAAGTGTCAAGAAACTGCACTCTCCCTTCTTAAGAACTGCCTAAAGTGTAAAATACATTTGAATGCAATTTTTGGAAGATTTTTTAATGTTCGTTTATTAAACTAACCCTAAGTGATTTCTTCAAGGACTGCAATCAGGGTATCAATTTGCTTTCCCAAAGGCTCTTCCAACCCGTGGGTTTTGGGGTCCACCGCCACCACGAGAGAGGCTTTTGAACAGGTGCCTGGCTGTGTTCAGAAGGAAGCTGGCCTGTGTGCTTCTCTCCGGTGGGCTCAGCCGACGTGTGAGACTTGTTCTGTTACCAAATGAACCGGGCTGCCACGCTGTGACAGGCGTTTGTCCTCTGCTTTATTTTTACTTTGAAGCTCAAATGCGAGTACTAAGTGTTCACCTCAGCGTTCGAATCATTGGCCTGTAACCCTGTGGGCTGCTTCACGAGAATTCAGGACCTGCATTTTCATTCTAAAAAGAAATGAACAGCTTGTGAAGGAGTTTTTTGGCTTCATAGTTTCTATTCATGAGGTAGTGTTACTTCTTTATCCCCCTAAAGACAAAATGAAGATAAAGGGGGATTGCCAGGAATGGGTTTAAAAGCACAAATGTGGTAGCTTATCATCTACACCATGGAGAGTGAACCCTTACGAAATGAAAGTCAAATGAGACCATCCGAGAAAAAGATGCGCATAGGCATTTGTACCATGATCAACCCCACGCACATGAAAACTGTGACCAAGTGACGTGCCTGGGAGCTTTGACACACGAGCCGTGTGAATTCACTAGGAAACATGTAATAAAGTCATGGAAGAGAAAATCGTGTGTAAACTTTGCCTTTAACTTTAGACCGCAGTATATTATAATACATTTGATATCTGAAATATCTTTACTTTTTTAAGAGTAAGATTCCATATGTCTGTCTGGAAGGGAGCCATGGTTATTCACACGAATATCCCTGTCACTTCTCCAGAGGTGTCAGGTAACTAACACGAGCATTCTTTGAAGACTCTGGGCACATGAATGATACACAGAATTGAATGTTTAAATTTCCACTGAGTCCTCATGAATCATTTGAGACTAGTACCAGCTGATCTTGTGTACAGGCTCAGGGTCAGTGCCCAAGGGCTCCCGCGTGTGTGTTCTGATCTTCAGTGCGTAGCACATTCTCCATTTAGAAAAGAGTGGTCAGAATAATTGTGGACGGTACAGTGGCTTTTTAAAACTACAGTCTTTAGGTGTAAGGTTTGGCGCCGGGAGCAATTTTATGATCAAATATGATGAACTCCTAAGTCACTGAGGTGTGATTGGGCCAATGTTGGCATGAGGTTCTTGCTCTACTTCCAGTGTTTTGATTCCACTGGGAGAATTTGGCCTAGTGTGTGGCTTTGGATGAATCCGTGTAGAGAGAGGTGAGCTTGTCCTGTTACAGATGCTGTCAGACATAGCGATAGTAGGCACCTAGGGAGGAAGTGGCCGTTAGTTTTACACTGACTTTTTAAGAATGGAGAATGCACGTGGGTTTCTGTTGCGGATGATTCATAGTAAGCAAGCGGTTGATGCTGTTAATACCGGCCCCACCCGATTGACATTAAGTTTATTCAGCTTTTAAAAAGATGAAGAACTAAGGGGAACAAATTTAAGTTTGTTGCAACTTAGCCACACATGCTTCCCTGGTACCAGCTGGAATCAGCAGCTCACAGGCATCTTCAGGACACTTCAGTGTATATGACACAGTACTTTGTTAGCGTCTGCGTGTGTATGGAAAGTTGACAAAAAATGGCATGAAAAGATCATGATTGGATTTTCTTTTAAACCTGCCCTTCTGTAAAAAATAGTTTATATATTTTTAAATTAGTAGGTATGTGTGGCTTCCTTTTTTCCTAACATTCCCAGCAAATTTTTGCTGCTAAGACTATCACTGTTAAAGTGAAAATTACAGGGAAAAATGTGATGAATATACCGTAACTCAAAATGTGATATTTTCTTAAAATCACTCTTTTATGCTTTAGGAACTGGTTGGTCTCCACTTTGATTATTAGTGTAAAGAGCCTGAGTATACGTGGATTTCATTGTAAAATTTAACTCCTTGTCTTTTACTTGGGGCACGGGGCCCCTGGAGGGCTTCCCTACTTTCCCCACTATGTTAACAGGTAATTCTGATTTATGCGTTTAGTTTGACTTATTTTTAACAAAATATTAGAAGTTATGCTTTAAAATGTTTAATGTGGACTGAAATTTTCATCTTTTGTTTGAGAATCTATGAAGTGTATCATATACGTGGCCTAAAGCAAGGTGTGTATTTTGTTATTCTGAAATTGTTTTGCATCTGGACAAATACTAAATATCCCAGTGGCCtttttttttttttttttAAAACCTGTGTATCCATCTCATCCTTTTGCGCATTCCTAGTAAGCAAAAAAATTTGTTATGCCATCTTCATTATTCGAATTACAGACTGAAAAAATATGGCCAGTTTTTAAAGAAGTTTAGATTATGTTTTCCATGGAAGGACAAGTCTGACTGTTCATAGGCTGATTTTCTTTAAGAGGATTATTCTGTTTTACAATTTCAATTCTAGATCACATTTTATATATGCTGCATGCCAAAAAAAAAAAAAAGAGAAAACTGCCTTTTCTGGTGTGGAGGGGAAGAAAAACTAATATTCTACCTTACTAGTAGAGTTCAAAACAAGTTTTCACTGAGAGCCTTTTCAGTAAAAGTTAAACAAGTTTGTTTTTTGAGCATTTGTCAGTTATTCTATTTCAGAAGAGTCAAAATTCAAGCACGATACATTTTGAAGGCTTTGCAAACTCCTAAACCCCTGATGAGTCCTCTCATTCTGGAAGTGGGAATTTGAGTAGATACTGATTTGTCCCGTAGTATGGCAGATGACAGGGAGGTCTTTTCCAAGCAGGCACTCAGAACACAGGTCACCGTATGTTCTCAGCCAGTAACAATCATACTGAGGACGAAGGACTCTCCGTTTGATGCAGACACAATTGTAATGGAGATGTAAAACTTCTTAGCAATCAGATGGATAAATTGTTTGCTTTTTACTTTAAATAGGAAATTGTTTTCTAAAACTAAAATACTTGAATTGTCAGACAATATAATCTCAGCTTGTATTAGTTTTTGAATGCTCCCATCGAGGAAGTGTAACAATCCATGAAATGTGAATAAATGAAAAGTAAACAAAATCCCAA