Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CBX1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name chromobox 1
Also known as CBX|HP1-BETA|HP1Hs-beta|HP1Hsbeta|M31|MOD1|p25beta
Coordinate chr17:48070059-48101478
Strand -
Gene summary This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family . The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The protein may play an important role in the epigenetic control of chromatin structure and gene expression. Several related pseudogenes are located on chromosomes 1, 3, and X. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Retrocopy(s) from CBX1

Retroname Coord Strand Genomic Region ENSG
CBX1P3 chr1:203954397-203958029 + Intergenic
ENSG00000237379 UCSC
CBX1P5 chr3:166810854-166812475 + Intergenic
ENSG00000231516 UCSC
CBX1P2 chrX:17098392-17100319 - Intragenic
ENSG00000214322 UCSC
CBX1P1 chrX:63297688-63299885 - Intergenic
ENSG00000230823 UCSC

Expression

Transcript Sequences

>NM_001127228.2
GCGAGCGGCGGGCAGCGCAGACTGCGAGGCTCTTTTGTTCGGCTGAGGGGAGGGCCGTTGGCCGGGGCCTGCGGTACGCCGCTTCAGTGAGGGACGCCACTGCGGCCACCCGGCTTGCTGCCTTCCTGGGCGCCACTCCCCCAGGCGACCCGACGCGACGCGCCAGCAGCGCAGCACCGATTCCTCTCGGGCTCTTGGGCGCTGCTCTGAGCAGCGTCACCCTTTACACCAGAAAGCTGGCGGGCACTATGGGGAAAAAACAAAACAAGAAGAAAGTGGAGGAGGTGCTAGAAGAGGAGGAAGAGGAATATGTGGTGGAAAAAGTTCTCGACCGTCGAGTGGTAAAGGGCAAAGTGGAGTACCTCCTAAAGTGGAAGGGATTCTCAGATGAGGACAACACATGGGAGCCAGAAGAGAACCTGGATTGCCCCGACCTCATTGCTGAGTTTCTGCAGTCACAGAAAACAGCACATGAGACAGATAAATCAGAGGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAGGGAGAGGAGAGCAAACCAaagaagaagaaagaagagTCAGAAAAGCCACGAGGCTTTGCTCGAGGTTTGGAGCCGGAGCGGATTATTGGAGCTACAGACTCCAGTGGAGAGCTCATGTTCCTGATGAAATGGAAAAACTCTGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTCATATCCTTCTATGAGGAAAGGCTGACGTGGCATTCCTACCCCTCGGAGGATGATGACAAAAAAGATGACAAGAACTAACGCTCCTGAGTACCAGCCCCTGTCACATCTGACTGTGGGTTTCAAGTGGGAAGGGAAGGAGTTCTACTTGTCTTGACACCATAGAGGTGGCTTGAGAAGATGTCCTTTGAAGAGCCAGTATAGTTTCTGTGCCCTGCAGCAGCCCAAGTGCTTTAAAGCCGTTTCAAGCTGTATAGTTTGCACACCCATCCCAGTGGAGGGGAAAGGGGATAAGTGTTTCAAGGCAACCTTTTCTGCACTTTGCTGCGAAAAGCAAAGGGCCTTCTATGAAGGACAAAACTTGCAGAATTGGGTGTGTGGGAGAGCAAAAAAATACTGTAGATCTTCAAAGAGCATCTCCACAACCCACAGCCTTCTTCCCAATAGTGTTAACTCTGCATTTTTACAGCGTAGCATGTGTGTAGTTTTTGGCTATTACTGGTGTATTATTTGggggagggagggatggggaggggagaaagggagATGGGTAGCATCATTTTGATTAACATTTGGGGCCTGATAGGGGAAATGGTGAAGCAATGGAAAAGAACAGACAACTAATGATTTGCTTCTATGTCCAGAATATTTTACCTTTAAAAAAATGTCATTGGCACCATAAATAAGGACTGTGAGAGACTGTTTAAAAGCTGTGAAAGTCTGAAACCTATAAGCCAAGGTGTTCCCTGCCTAAACTTATTGCTGTTCCCACAAAGGACTAAGCCTGTTCATAAGTTACCAAAGTTGCCATTTTGGAGATGGAAATTGACGAGGAGGGAAGGTCTTTTATTGGAGAGTATACAGTACAAGCAGATCATTCTGCCTTAGAGGTGCTAATTCCCGAAATTAGAAGACCCTTTCTTTTCCAGTAACGAAGTTATAAATATCAGCTTGTTCATCCAAGCCACTGGCTGAGGTGTTAGGAAGAGGAAGAGGGTGGTAGAGGAGGTAAGACAGTAGGGAAAGACAAGGGCCCATGCTCTTAGTGGGGAAAACTCTTGGAGCCGTTTACTTTGAGCTTTGAACACTGAAACCATTGTTGGCAGGGTTCAGTCACTGACAGCACAAGTTTCACTGAATTGATCCAAGAGTTTAGTGATTTCAAAAGCCTTGGTCTCAGGAGAAGATTAAACTTTCATATTGGGCAGTGGTTCACTTTAAAacacacacatacacacacaAAACAATTTTTTAAGAAATCCTAATAAGTAACATACCCAAAATGCTCTGTCTTGAGTCATGAGAACCATCAGTTCTTGATATTGTCTAGACTTGCATCTAGAGCTACGTTGTAAAATTCTTTTAGGCATGTGTTAGATTTCTGTGTAAACTTTGTTTAAATGTAAACTTCATACTACATTGTCAGTTTTTGTCTTAATAAAACTATAGATTTATAA