Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name AP4S1
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name adaptor related protein complex 4 subunit sigma 1
Also known as AP47B|CLA20|CLAPS4|CPSQ6|SPG52
Coordinate chr14:31025106-31096450
Strand +
Gene summary This gene encodes a member of the adaptor complexes small subunit protein family. These proteins are components of the heterotetrameric adaptor protein complexes, which play important roles in the secretory and endocytic pathways by mediating vesicle formation and sorting of integral membrane proteins. The encoded protein is the small subunit of adaptor protein complex-4, which is associated with both clathrin- and nonclathrin-coated vesicles. Mutations in this gene are associated with spastic quadriplegic cerebral palsy-6. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 6. [provided by RefSeq, Dec 2011]

Retrocopy(s) from AP4S1

Retroname Coord Strand Genomic Region ENSG
AP4S1P1 chr6:89059409-89063108 + Intergenic
ENSG00000220960 UCSC

Expression

Transcript Sequences

>NM_001128126.3
ACTAAAAGCCAAAATGGCTGCCCCGAGGAGGCCCGCACCGCGTAGCCAGTGAAGGTTGGGGAGCAAGCTTATGCGGGAAAGAGGGAGGGGGACTCCAGGAAAAGCCGTTGAGAGGACCATCACAACCTGAGCAGCACAGGTTCCAGTTACAGCCATCCCTTGTCATAACTTTTGAACTGTATTTGGAAAAATACTGGCCAGGAAAGAAAAATGATAAAATTTTTCCTCATGGTGAATAAACAAGGGCAGACTCGACTTTCTAAGTACTATGAACATGTGGATATTAATAAGCGTACACTTCTGGAAACAGAAGTCATAAAGAGCTGTCTCTCTCGATCCAATGAACAATGCTCTTTCATTGAATATAAGGATTTTAAGCTGATATATCGGCAGTATGCAGCTCTCTTCATTGTGGTTGGAGTTAATGACACTGAGAACGAGATGGCTATTTATGAATTCATTCATAACTTTGTGGAAGTTTTAGATGAGTATTTCAGCCGAGTGAGTGAATTAGATATAATGTTTAATTTGGATAAAGTACACATCATTTTGGATGAGATGGTGTTAAATGGCTGCATTGTGGAAACTAACAGGGCAAGAATTCTTGCCCCTCTACTAATTCTTGATAAGATGTCAGAAAGCTGAAAGGAAGTCTCTTCGAGACAATATGGATTTATCAGAAATGCGAGTACCGTGGAATACATCTCAACATGTTAACCCAGAAGAATCTGGAAGACCACAATTACAAAATGGGGTATCCTTCCAAAGACATTATAAATAGGCATTTTCCACAGTTCCTAAAAAGAAAACACAACTGTACTTTAAAATATGTACAAAGAAAAAAATTTCTTTAAACTGAGAGAGAAGTTTTATTTTCTAATTGTAAACATATCTGTCGCACTTTAAATTCTGTTGAGCACCTAAGGAACCCTTCTTGGTCTATGCTTCTTTTGCAAATTGAATTCAGGAATAGCAGGATGGTAGTGGGAAGAAAGTATGGCAGTTTTCCGTCAGCCAATAAAGTTTTAAAATTTAAACACAAGGCATTTTGAGTAACGCTGTTTTCTGAAAGCTAtttttttttttttgagacggagtctagtctagctgtgtcacctggcacattctcggctcactgcaacctccacttccggggttcaagcgattctcctgcctcagcctccgagctgggactacaggcatgcaccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctgtctcaaactcctgacctcaggtgatctgcctgcctcagcctcccagaacgctgggattacagatgagccacagtgcctgacTTCTGAAGGCTGTCTTATTCCTTTAAAAGGCTTAGTAAAATTAACTTTTTAAGAGGtgtttttttgtttgtttttttgttttgttttttaagacggagtcttgctctgtcacccaagctggagtgcagtggtgtgatctcagctcactgcaacctccacctctgggtttaagcaattctcctgcctcagcctcctgagtagctgcgactacaggcatgtagtccccaggagactgagctgtgattacagatgtgagccaccatgccctgcccggttttatgtaaagcccagctaatttttgtatttttagtagagatagggtttcaccatgttggccaggctgttcttgaactcctgacctcaagtgatccacctgcttcagcctcccaaagtgctgggattacaagcatgagccaccatgcccagccAAGAGGTGttttttgtttgtttgtttttaagagaagcaggtcttgctgtgttgtccaggctggactgcagtggcttttcacaagcatgatcATGTTGTACTACAACCTTGAACCTTCCTGGCCTGGCTCTAAAAGCTTTGTAATGTGGGGCTggtgcagtgcctcacacctgtaacccctgcactttgggaggctgaggaaggaggatcgcttgaggccagaaattcaagaccagcctgggcaacatagacctcatctctacaaaaaatgcaaaaatcagccgggtgtggtggcacatacctgtagtctcaactactcgggagtctgaggcagaagatttcttgagcccaggagttcgagtctgcagtgagctatgatcgtgtcactgcactccagcctgggtgacagagtgaaaccctgtctcaaaaataaaaaaGTccgagtgcggtggctcaggcctgtaatcccaacattttggggggccaagccaggaggattggttgagcccattagttcaagaccagcctgggcaacacagcaagaccatatctctacaaaaaataaataggtgtgatggctcatgcctgtaatcctagtactttgggaggccgaggcaggcagatcacttgaggtcaggagtttgaaaccagcctggccaacatggcaaaaccttgtctctactaaaaatacaaaaagttagccaggcatggtggcaagcacctctaatctcagctactcaggaggctgaggcagtagaattgcttgaacccgggaggcagaggttgcagtgagccgagatcatgccactgcactccagcctgggcgacagagtgagaccctgtctctaaaaataagtaaataactaattaaaaagttagccagctgtggtggtgagcacctgtactcctaactactcaagaggctgagatgggagaattgatcaagcctaggagtttgaggctgcagtgaactatgatcacaacactgtactccaacctgggtaatggagtgaggccctgcctcaaaaacacaaaaacaaaacaaaaaaaCTTTTATAACATGTACCTAACAAAGATGCAGAGTTAAATTTTATTTGCCAGTTTGTAAAAGCCTTTGATACTCATTTTAAGGGCACTTAGTAATTACAATGCCATTATGTAATTAACTCTATAGAGAACATTACTTTCAAATAATGGATGGTCAGACATTAAGACAGCCCCAGAGAGCCCCTACAGCTATCCTTTATCCCGttttttgtttgttttttggagacagcatctccgtctcctaggctggagtgcagtggtgtgatcatgcctcactacagcctgtacctcctgggctcaggtgctcctcccacctcagcctcctgagtaactgggaccacaggtgcgcaccccctccacccagctaatttttgtattttgttgtagagatagggtttcactatgttgcccagactggtctcgaattcctgcagtcacatgatccatctgccttcgccttccaaagtgttgggattacaggcctgagccactgtgcccagtcTTTTTATGCCACATTTTAAAAGGTTTGCTTATTAATAAGCTTACTGTTAATGAAATTTAGTTCAAAGTTTAAAAGTAGAATGCAgccaggcatggtggcttacgcctataatcccagcactttgggacgccaaggtgggtagatcatttgaggtcaggagttcaagaccagcttggccaacatggtgagaccctgtctctactaaaactacgaaaaattagccgggcatggtggcacgcgcctataatcccaactacttgggaggctgtggtaggaggatcacttgaacccaggagacagaggttgcagtgagttgagatcgagattgtgccactgcactccagcctgggcacagagtgagattccgtctcaaaaaaaaaaaaaaaaaaaaaaGTAGAAAGCAAGAAAGTGTCTCTGTACAGGTAGGCATGAAATGAATCCTTCTCTTCCTCCCCTTTACTCCTTTAACCCCTTCTCCTGCAATGTCTTGAAGTAAATTACTGTCATTACAGAAGAGCAATGCACTGCATCCCCCCAAAACCTTTCTATATGCTTTTGCTACCCCGTTAACAGAAGAATATACAGAACTGTCTTAGGCGAAAGTATGTAcagtagtccctctcttatccactgtttcgcattctgtggtttgtgttactcatggtcaactgaggtcccaaaatattaaacagaaaattccagaaataaacaatgtataagttttaaactgca