Summary

Gene Name	LSM6
Specie	Homo sapiens
Full Name	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Also known as	YDR378C
Coordinate	chr4:146175714-146191535
Strand	+
Gene summary	Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]

Retrocopy(s) from LSM6

Retroname	Coord	Strand	Genomic Region	ENSG
LSM6P3	chr1:197238850-197239061	-	Intragenic	N/A	UCSC
LSM6P5	chr18:61618227-61618624	-	Intergenic	N/A	UCSC
LSM6P6	chr19:54446829-54447265	+	Intergenic	ENSG00000235681	UCSC
LSM6P4	chr2:59514880-59515359	+	Intergenic	ENSG00000270447	UCSC
LSM6P2	chr12:49770896-49772024	+	Intergenic	ENSG00000257730	UCSC

Expression

Transcript Sequences

>NM_007080.3

CCCTGCCTCGGCGCTTTCGGTTTTGGCTGGGATCATCCGCGGCGGCCGGGCTCGTGGGGCGCCTGGAGTGAGGGTTCTGGTTCCCGCCGGCGAGGATTGTTAAAATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAGCAAATCATCGGACGACCAGTTGTGGTAAAATTAAATTCTGGAGTGGATTATCGAGGGGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCCCTGGAGCAGACAGAAGAATATGTAAATGGACAACTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGTGTTGTACATCAGTACACAGAAGAGACGGATGTGAAGACACCAAGAGAGCAACGCTTTTCATAGTTGGATATATTTTTTTATGAATTTTTTCTAATTTTTGCTTCTTTTGTGATACAATTTGTCCTCTTTTTATAATAGTTGGTGATTTTTCACTGACATGTGAGTAAGATAAATGTATACAATTGTGGATTTAATTGTGAAATGTTCTTTCACTTGTAAGTTTCAGTCATTTTCTTTTACCTCGTTGTCAGTGTACAGAATGCTAAAATAATTAAAAAAAGACAAAATATACCTCTTCCTACAAGATTATTTAACTTAAGTTTCGAGAAGTGTCATTTCATTTGACTTGCTTTTCTTATCCAGCTAAAATGATGCATATATTTTATATATTGTATGGACATATAATTAAAACATTTTGGAGGAATCCTCCTTTATTGCATCCTTTTCTGTTCATACAGAATCCTTGCGTGAATATGTTCTACAAAGGCATCCAGTTTCAGTCTGAAGCTACAAAAAGGGGCCACAGGATCAGAAGTTCAGCCACTGATTGAGTCACCTAAATAAAAAACAGAATTGGAAAGCCAAGAGTGCCACTTGCACATAAGGAGTGGGAATTCGAACTGAGGTGCTGGAGAAATCCTAAAGATGAACAAGATTTCAGTGAGGAGAAAGCCCTCCTGTCAGTGGTCCCCCTGCATCTCCTTATGCAATTAGACTTTTTAGGTTTCCCTGCTCCCTTTCAGGAGCATTGGCATCAACGTTATTCTCTCAGTTTATGAACACAGTAGGGGAGGGGCCATTCCTGTACATCTCTCACAGTCAGATTAAAGCAAAGCCTAGAGTTTGTAAACATAATTCAGGTTCTAATTGCCGAGCTGAGATTGGGAAAGAATTTTTCCTAACTCTGGTCTAGCAAGTGGCTGTAGGGAGGCCTTTCTCAAAAATCAGCTGTATTTGCCTTTGACATTGTCCAGGAGCAGAGCACCAGGCTTTATGTTGCTTGGCACAAGGCAGCTCCTCTGGTTATGTGACTCCTGCTGAGAGGATTTTCACAATTTATTAATGAGCTTTCCACAACCCTGCTTTATTCTCCAAACAGTTTTACGCTGTCTCTAGGAACAACAAATATATCTGGGCACTGTGGTTGAATGAATACCAGACAATTGTGTGAATGTTGTATTGGACTTCCTCTTCCCTCCCTTCCCAATCTAAATAGCATTCCTATTTCAGGAGCCGATGGTGTGATTCGAAACAACTGCTTGGTTGAAGGATGGGGGGCAGGATCGAGAAGGAGAGAGGGAAGGGGCAGTGCTGATTCTGGAGAGGTGTATGTAGTGTTTTGTCTTGGTTTATTTTAAAGATCAGAGAGTAATTGGAAACAATTATTTTTTAATTAATAACTTGGGAAAGGTGAACAGAAGCATTTCACAGGGTTTTACCGTGTGCACACTGAAAATAAAACACTTTATGCTATGCTTCAATAATTTATCACTTCTTGACAGGGGCTTGGAAAAGGTCCAGTATGTAAGTACAAATCACCAATTTGCTCTTTTATAAATGAGTTCTTTTAAGGAGAAAATGGATGGCTCTCCAAGTGGAGCATACATGTTCTCATTTGTTTTGTAGAATATGTGGGGCTGCAGGTTATTGTGTCCCTTCATTCACTTATATCAGCCACCTCTAAAAGCAATTCCATTGTAGTCTCCCACTAATCTGTAGCGTCCTGTTTTTTCTAACTTCTTCCCTGACCTCGCCTTTGATATATAAGTCTTTATTTTCCCCTTGCCATCTCTCTAGTTTAATAGCTCTACAGTGGAGTACTGTTTTCAACCATGGAACTACTTTTAATCAAGATCAACTTTGGGAAGTGCTGCCATTTTTATGGTAATAAAGGACTGTATTATGCACTTGAA

>XM_017007672.1

GTGCCCCTGCCTCGGCGCTTTCGGTTTTGGCTGGGATCATCCGCGGCGGCCGGGCTCGTGGGGCGCCTGGAGTGAGGGTTCTGGTTCCCGCCGGCGAGATTTAGGATTGTTAAAATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAGCAAATCATCGGACGACCAGTTGTGGTAAAATTAAATTCTGGAGTGGATTATCGAGGGGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCCCTGGAGCAGACAGAAGAATATGTAAATGGACAACTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGTGTTGTACATCAGTACACAGAAGAGACGGATGTGAAGACACCAAGAGAGCAACGCTTTTCATAGTTGGATATATTTTTTTATGAATTTTTTCTAATTTTTGCTTCTTTTGTGATACAATTTGTCCTCTTTTTATAATAGTTGGTGATTTTTCACTGACATGTGAGTAAGATAAATGTATACAATTGTGGATTTAATTGTGAAATGTTCTTTCACTTGTAAGTTTCAGTCATTTTCTTTTACCTCGTTGTCAGTGTACAGAATGCTAAAATAATTAAAAAAAGACAAAATATACCTCTTCCTACAAGATTATTTAACTTAAGTTTCGAGAAGTGTCATTTCATTTGACTTGCTTTTCTTATCCAGCTAAAATGATGCATATATTTTATATATTGTATGGACATATAATTAAAACATTTTGGAGGAATCCTC