Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PDCD10
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name programmed cell death 10
Also known as CCM3|TFAR15
Coordinate chr3:167683298-167735810
Strand -
Gene summary This gene encodes an evolutionarily conserved protein associated with cell apoptosis. The protein interacts with the serine/threonine protein kinase MST4 to modulate the extracellular signal-regulated kinase (ERK) pathway. It also interacts with and is phosphoryated by serine/threonine kinase 25, and is thought to function in a signaling pathway essential for vascular developent. Mutations in this gene are one cause of cerebral cavernous malformations, which are vascular malformations that cause seizures and cerebral hemorrhages. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Retrocopy(s) from PDCD10

Retroname Coord Strand Genomic Region ENSG
PDCD10P1 chr8:50859668-50859994 + Intergenic
ENSG00000253340 UCSC

Expression

Transcript Sequences

>NM_145859.2
GGGTCCTTCCGGCGTCGCCGGAGTGAATTGATCCGGGAGTTGAAGAGGGCTGCAAGGTGGGAAGTGAAGTCAGTGCCTCAGTTGCTGCTTTCTCCTCTAAATCTTGGTCTCTTGTTTGGAAGTGACTAACAGCATTTTGGCATGAGAAAGCCCTAAAAAGATCAGTGTGTTTTTTGTGTCCAATTCTTTTATCACCAAAAAAGAGAAGAAATATTGCAGTGAATGAAGATTCCTCTGCATTTTAGCACTGCTTTTTCAACTGTAGTTGGCTTTTGAATGAGGATGACAATGGAAGAGATGAAGAATGAAGCTGAGACCACATCCATGGTTTCTATGCCCCTCTATGCAGTCATGTATCCTGTGTTTAATGAGCTAGAACGAGTAAATCTGTCTGCAGCCCAGACACTGAGAGCCGCTTTCATCAAGGCTGAAAAAGAAAATCCAGGTCTCACACAAGACATCATTATGAAAATTTTAGAGAAAAAAAGCGTGGAAGTTAACTTCACGGAGTCCCTTCTTCGTATGGCAGCTGATGATGTAGAAGAGTATATGATTGAACGACCAGAGCCAGAATTCCAAGACCTAAACGAAAAGGCACGAGCACTTAAACAAATTCTCAGTAAGATCCCAGATGAGATCAATGACAGAGTGAGGTTTCTGCAGACAATCAAGGATATAGCTAGTGCAATAAAAGAACTTCTTGATACAGTGAATAATGTCTTCAAGAAATATCAATACCAGAACCGCAGGGCACTTGAACACCAAAAGAAAGAATTTGTAAAGTACTCCAAAAGTTTCAGTGATACTCTGAAAACGTATTTTAAAGATGGCAAGGCAATAAATGTGTTCGTAAGTGCCAACCGACTAATTCATCAAACCAACTTAATACTTCAGACCTTCAAAACTGTGGCCTGAAAGTTGTATATGTTAAGAGATGTACTTCTCAGTGGCAGTATTGAACTGCCTTTATCTGTAAATTTTAAAGTTTGACTGTATAAATTATCAGTCCCTCCTGAAGGGATCTAATCCAGGATGTTGAATGGGATTATTGCCATCTTACACCATATTTTTGTAAAATGTAGCTTAATCATAATCTCACACTGAAGATTTTGCATCACTTTTGCTATTATCATTCTTTTAAGAATTATAAGCCAAAAGAATTTACGCCTTAATGTGTCATTATATAACATTCCTTAAAAGAATTGTAAATATTGGTGTTTGTTTCTGACATTTTAACTTGAAAGCGATATGCTGCAAGATAATGTATTTAACAATATTTGGTGGCAAATATTCAATAAATAGTTTACATCTGTTAAACATTTCTTTACTTGAAAAAATGCatatatatatgtgtgtatatatatatatatatatatatatatGAACAGAAGACCAAGACAACTTGGTGTAATGTCTAAAAAACTTCTAATGGGAGCTTATCAGCAGTTTATCAAATAATAAAGCAAGAATTTCTATTTTTGTCCTTAATCACTTTGGACACAGAGTAGTCAATGGAAATATTTTTGTTAATTACTTATAAGGTACTGAGTATTTTTATATGATTTCCAACCTGTTTTAAACGACTTATGAGTAAGAGATAGCATTTTCTAGTGTTTTTGCACTATAATGCCACTTTTTGAACTCTTGTGACAAATGTAGATTTGACTCTTAAAAATTAAGCCTTTCGTATACTGGGCCCTCATAAGCTTTGCACAATTTTTTCCCAAAAAATAGCCACAATTAATAGTAATTTGAAGCTATATCAACGGTTGGATTGAAATTGTCATGAGTGTTAATATTATATACACTCTTCAACTAGGTACAGTTTTATTTCACCATAGAGAAGTTTTAAGGAAATTATGTATCAAGTGTTCATGTTAAGTGGTTTCATTTTTCAATTATAAAATAAAGGGAAAAAATCAGAA