Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name TSEN15
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name tRNA splicing endonuclease subunit 15
Also known as C1orf19|PCH2F|sen15
Coordinate chr1:184051730-184097485
Strand +
Gene summary This gene encodes a subunit of the tRNA splicing endonuclease, which catalyzes the removal of introns from tRNA precursors. Alternative splicing results in multiple transcript variants. There is a pseudogene of this gene on chromosome 17. [provided by RefSeq, Jul 2014]

Retrocopy(s) from TSEN15

Retroname Coord Strand Genomic Region ENSG
TSEN15P1 chr17:17456400-17459574 + Intergenic
 ENSG00000230865 UCSC
TSEN15P3 chr7:25265349-25266187 - Intergenic
 ENSG00000234922 UCSC
TSEN15P2 chr1:51859826-51860219 + Intragenic
 ENSG00000230604 UCSC

Expression

Transcript Sequences

>NM_001300764.2
ACCACGGGAGCGCCGCACCGGCCGGCATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGGCGGTGGAGCTCCTTCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAGATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCCTCAGCCATAACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAGTTGCAAGGTGATCCAGATTTGCCGATGTCTTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATGCTGCCAGACCCTCAGGTCAGTTTTGAGAATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCTTGTTTTATTCATACAAGATTGGATTTGAGACCCATCAGACTGCTTCATCTTTTATCTCAGAAATAGGGTTGACGTACATAGTGAGGGTTGACTTCCCCATTCCATAAGGTTTTCATTCTGAAGAGTAAAACTTCCCCAGGTAGAAGACTTTCTCCTTCTTAAAAAATATAGGGTGATTTCTTTAAAACTTTGTTATCTAGAGACAGTTTAATTACAGTTATATACAGGTTTATGCCTAGGATGTATTCAGATGGGTGGGACCTGTGTGCTGCTTTTGTCATCCCACACTCAAAGTTGTCTCTTTGTTTCTTGCTGCCACTGCCAGCTCATTGTTGAGACTGCCATTTCTTTCTCTTACTCAGCTCTCCCCAGTGCCTTTTGGCCACTGCAGCTACCGTAGAATGGCATTTTATATGTACCTTGTCACCCACTTCTGTTTACTTTTTCCTCTCCAGTAAAAAGTAAAAGATTTCTTTCAATTGGTCTTCCCATTGCAGTTACTGTTATTTCTCTTTTTTGGTTAACTTTAAATCAAAACTCAAAATATGTTCATCCAGAGTGTGTCTTAAGTAACTTACGTGTCTTAAGTAACAGGGACCAGAGACATGTTACCTACAAGAGTTCTGGGCTATCCTTTTCATTCTTATCACATATCATAGCTTGAATATTACAACAGTGTGGGAGAGAATCaaccgtaaaaatgtcttcattaattagacccagttattccacttttgttaatgtctctcaaattgtacaaagtataaaaaattatatgcacaaagatgttccaagtgacattacttttagtagcccaaattataaaccactttaaagtTTGGGGTAAAgattggcaaactttttctataaagggccagaaagtaactattttaggtttttaaacctactgtctctgtcataacttgtcaacactgctgtatgaagcacaaaagcagccatagacaatacataaacaatacgggcgtggctttgttccagtaaaactttgtttacaaaTGTGGTGCCATAGTTTGTCATCCCTGGGTCTAGGAAATAGTCAATAAACAGATATATACAAATGATACATAATGTACTTATTAAAAATTAGTAATGAATATTATTAAAAACATGAAAATATTACCTTAAGTAAAAATTGCAAGACGGAAAAGTGTATAAGTGGGTGTAATCATGGCTGAAATAACAGACCAAGCATATGATAAAAAGATAACAAAGTAAATCAAATTACTAACTGGTTATAGTGGGATAGGAGGCAGAAAATGGATGACTTTGTCTTTTCTCAATGTTTTTATTTGTATTTTATAATAAAAATGTTTTAAAATTAAAA
>NM_052965.4
ACCACGGGAGCGCCGCACCGGCCGGCATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGGCGGTGGAGCTCCTTCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAGATATAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCCTACCCCCATCACTGCTTCCCTCAGCCATAACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAGTTGCAAGGTGATCCAGATTTGCCGATGTCTTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATGCTGCCAGACCCTCAGAATATTTCTCTTAGAAGATGACATCCATGTTTCCTGATGCTTGTTTTATTCATACAAGATTGGATTTGAGACCCATCAGACTGCTTCATCTTTTATCTCAGAAATAGGGTTGACGTACATAGTGAGGGTTGACTTCCCCATTCCATAAGGTTTTCATTCTGAAGAGTAAAACTTCCCCAGGTAGAAGACTTTCTCCTTCTTAAAAAATATAGGGTGATTTCTTTAAAACTTTGTTATCTAGAGACAGTTTAATTACAGTTATATACAGGTTTATGCCTAGGATGTATTCAGATGGGTGGGACCTGTGTGCTGCTTTTGTCATCCCACACTCAAAGTTGTCTCTTTGTTTCTTGCTGCCACTGCCAGCTCATTGTTGAGACTGCCATTTCTTTCTCTTACTCAGCTCTCCCCAGTGCCTTTTGGCCACTGCAGCTACCGTAGAATGGCATTTTATATGTACCTTGTCACCCACTTCTGTTTACTTTTTCCTCTCCAGTAAAAAGTAAAAGATTTCTTTCAATTGGTCTTCCCATTGCAGTTACTGTTATTTCTCTTTTTTGGTTAACTTTAAATCAAAACTCAAAATATGTTCATCCAGAGTGTGTCTTAAGTAACTTACGTGTCTTAAGTAACAGGGACCAGAGACATGTTACCTACAAGAGTTCTGGGCTATCCTTTTCATTCTTATCACATATCATAGCTTGAATATTACAACAGTGTGGGAGAGAATCaaccgtaaaaatgtcttcattaattagacccagttattccacttttgttaatgtctctcaaattgtacaaagtataaaaaattatatgcacaaagatgttccaagtgacattacttttagtagcccaaattataaaccactttaaagtTTGGGGTAAAgattggcaaactttttctataaagggccagaaagtaactattttaggtttttaaacctactgtctctgtcataacttgtcaacactgctgtatgaagcacaaaagcagccatagacaatacataaacaatacgggcgtggctttgttccagtaaaactttgtttacaaaTGTGGTGCCATAGTTTGTCATCCCTGGGTCTAGGAAATAGTCAATAAACAGATATATACAAATGATACATAATGTACTTATTAAAAATTAGTAATGAATATTATTAAAAACATGAAAATATTACCTTAAGTAAAAATTGCAAGACGGAAAAGTGTATAAGTGGGTGTAATCATGGCTGAAATAACAGACCAAGCATATGATAAAAAGATAACAAAGTAAATCAAATTACTAACTGGTTATAGTGGGATAGGAGGCAGAAAATGGATGACTTTGTCTTTTCTCAATGTTTTTATTTGTATTTTATAATAAAAATGTTTTAAAATTAAAA