Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Alpl
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name alkaline phosphatase, liver/bone/kidney
Also known as ALP|APTNAP|Akp-2|Akp2|TNAP|TNSALP
Coordinate chr4:137469042-137523695
Strand -
Gene summary This gene encodes a preproprotein that is proteolytically cleaved to yield a signal peptide and a proproptein that is subsequently processed to generate the active mature peptide. The encoded protein is a membrane-bound glycosylated enzyme that catalyzes the hydrolysis of phosphate esters at alkaline pH. The mature peptide maintains the ratio of inorganic phosphate to inorganic pyrophosphate required for bone mineralization. Mice that lack this enzyme show symptoms of osteomalacia, softening of the bones. In humans, mutations in this gene are associated with hypophosphatasia, an inherited metabolic bone disease in which deficiency of this enzyme inhibits bone mineralization leading to skeletal defects. Mutations in the mouse gene mirror the symptoms of human hypophosphatasia. A pseudogene of this gene is present on chromosome X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2015]

Retrocopy(s) from Alpl

Retroname Coord Strand Genomic Region ENSG
AlplP1 chrX:65807365-65807679 + Intergenic
ENSMUSG00000084074 UCSC

Expression

Transcript Sequences

>NM_001287172.1
CTAGTGGGTTTGTGTGACAATCACATCTGAAGGCTCTCTTCACTCCAAGATGGCCCTCCTGTCGCCCACTCTGGACTTGGTGGTCACAGCAGTTGGTAGCTTCCTTCTGTTCGTGCTGGCCCTGGGCCTGCTCTGTTTCTTCACCTGTCGCCTGGCCAGGCCACTCAGGATCGGAACGTCAATTAACGTCAATTAACATCTgacgctgcccccccccccctcttcccACCATCTGGGCTCCAGCGAGGGACGAATCTCAGGGTACACCATGATCTCACCATTTTTAGTACTGGCCATCGGCACCTGCCTTACCAACTCTTTTGTGCCAGagaaagagagagaccccAGTTACTGGCGACAGCAAGCCCAAGAGACCTTGAAAAATGCCCTGAAACTCCAAAAGCTCAACACCAATGTAGCCAAGAATGTCATCATGTTCCTGGGAGATGGTATGGGCGTCTCCACAGTAACCGCTGCCCGAATCCTTAAGGGCCAGCTACACCACAACACGGGCGAGGAGACCCGGCTGGAGATGGACAAATTCCCCTTTGTGGCCCTCTCCAAGACATATAACACCAACGCTCAGGTCCCTGACAGCGCGGGCACTGCCACTGCCTACTTGTGTGGCGTGAAGGCCAACGAGGGCACAGTGGGAGTGAGCGCAGCCACAGAGCGCACGCGATGCAACACCACTCAGGGCAATGAGGTCACATCCATCCTGCGCTGGGCCAAGGATGCTGGGAAGTCCGTGGGCATTGTGACTACCACTCGGGTGAACCACGCCACACCCAGTGCAGCCTACGCACACTCGGCCGATCGGGACTGGTACTCGGATAACGAGATGCCACCAGAGGCTCTGAGCCAGGGCTGCAAGGACATCGCATATCAGCTAATGCACAATATCAAGGATATCGACGTGATCATGGGTGGCGGCCGGAAATACATGTACCCGAAGAACAGAACTGATGTGGAATACGAACTGGATGAGAAGGCCAGGGGTACAAGGCTAGATGGCCTGGATCTCATCAGTATTTGGAAGAGCTTTAAACCCAGACACAAGCATTCCCACTATGTCTGGAACCGCACTGAACTGCTGGCCCTTGACCCCTCCAGGGTGGACTACCTCTTAGGTCTCTTTGAGCCCGGGGACATGCAGTATGAATTGAATCGGAACAACCTGACTGACCCTTCGCTCTCCGAGATGGTGGAGGTGGCCCTCCGGATCCTGACCAAAAACCTCAAAGGCTTCTTCTTGCTGGTGGAAGGAGGCAGGATTGACCACGGACATCATGAGGGTAAGGCCAAGCAGGCTCTGCATGAAGCAGTGGAGATGGACCAGGCCATTGGCAAGGCAGGCGCCATGACATCCCAGAAAGACACCTTGACTGTGGTTACTGCTGATCATTCCCACGTTTTCACATTCGGTGGATACACCCCCCGGGGCAACTCCATCTTTGGTCTGGCTCCCATGGTGAGCGACACGGACAAGAAGCCCTTCACGGCCATCCTATATGGTAACGGGCCTGGCTACAAGGTGGTGGACGGTGAACGGGAAAATGTCTCCATGGTAGATTACGCTCACAACAACTACCAGGCCCAGTCCGCTGTTCCCCTGCGCCATGAGACCCACGGTGGAGAAGACGTGGCGGTCTTTGCCAAGGGCCCGATGGCACACCTGCTTCACGGCGTCCATGAGCAGAACTACATTCCCCATGTGATGGCGTATGCCTCCTGCATTGGGGCCAACCTTGACCACTGTGCCTGGGCCGGCTCTGGGAGCGCACCCTCCCCAGGGGCCCTGCTGCTTCCACTGGCTGTGCTCTCCCTACGCACCCTGTTCTGAGGGTGCAGGTCCCACAAGCCCGCAATGGACAGCCAGCTCCCCTCCTTTTGTGGCCCACCACCGGGCAGCCCACACTCAAGGGAGAGGTCCAGGCAACTTCCAGCAGGAACAGAAGTTCGCTATCTGCCTTGCCTGTATCTGGAATCCTCCATGGGCCAGATTCCTGGCTCTGCCTTTATTCCCTAGTTATTGCCCTTTGGCCAGCAGGTTTCTCTCTTGGGCAGGCAAGACACAGACTGCACAGATTCCCAAAGCACCTtatttttctaccaaatatattCTCCAGACCCTGCAACCTCCATGGAACATTCCAGATCTGACCTTctctcctccatcccttcccttccctctggaACACTGGGCCCCATAGTCACGGCCAGTCCTCAAGCCCAACCCTCCCTGGGGGGAAGACCAGGTCTGCTCAGGATGAGACTCCCAGGAAGCCACCTCCGGGGTTGGCTGTCTACCCAGGGTTGCCAAGCTGGGAAGAACACTCCAGCcggacaggacacacacacacactccccacccaATTGCAGAGACTCGCCAACCCTTCACTGAAGTGGCTCTCCTGTTTGGAatagcggggtggggtgggggagaagaaagaaagaaagaaaaaaaatttttaatttctctttttggTGTTGGTTAAAAGGGAACACAAGACATTTAAATAAAACATCCCAAATATTTCTGAGGCCAG