Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps15a
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein S15a
Also known as -
Coordinate chr1:187759865-187766734
Strand -
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in positive regulation of cell cycle; positive regulation of cell population proliferation; and response to virus. Part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 20. Orthologous to human RPS15A (ribosomal protein S15a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps15a

Retroname Coord Strand Genomic Region ENSG
Rps15aP3 chr2:182812434-182812756 - Intragenic
N/A UCSC
Rps15aP4 chr2:198458154-198458330 - Intergenic
N/A UCSC
Rps15aP6 chr3:145747083-145747261 + Intergenic
N/A UCSC
Rps15aP7 chr4:25985751-25986000 + Intragenic
N/A UCSC
Rps15aP8 chr5:127075905-127076171 + Intragenic
N/A UCSC
Rps15aP9 chr5:141368715-141369070 + Intergenic
N/A UCSC
Rps15aP14 chr8:117110183-117110339 + Intragenic
N/A UCSC
Rps15aP17 chr8:95529679-95530001 - Intergenic
N/A UCSC
Rps15aP21 chr12:29627155-29627592 - Intragenic
N/A UCSC
Rps15aP23 chr14:91127663-91127873 - Intergenic
N/A UCSC
Rps15aP1 chr1:196095175-196095634 + Intergenic
N/A UCSC
Rps15aP2 chr1:36275518-36275778 - Intergenic
N/A UCSC
Rps15aP5 chr2:55055295-55055754 - Intergenic
N/A UCSC
Rps15aP10 chr5:173148853-173149312 + Intergenic
N/A UCSC
Rps15aP11 chr6:11193568-11194067 + Intergenic
N/A UCSC
Rps15aP12 chr6:38041597-38042058 - Intragenic
N/A UCSC
Rps15aP13 chr6:78817444-78817696 - Intergenic
N/A UCSC
Rps15aP15 chr8:61603960-61604421 + Intergenic
N/A UCSC
Rps15aP16 chr8:64588513-64588924 - Intragenic
N/A UCSC
Rps15aP18 chr10:71379240-71379696 + Intragenic
N/A UCSC
Rps15aP19 chr11:84094490-84094948 + Intergenic
N/A UCSC
Rps15aP20 chr12:11302251-11302704 - Intergenic
N/A UCSC
Rps15aP22 chr14:62294858-62295110 - Intergenic
N/A UCSC
Rps15aP24 chr16:47283217-47283671 + Intergenic
N/A UCSC
Rps15aP25 chr16:62418307-62418756 - Intergenic
N/A UCSC
Rps15aP26 chr19:21049089-21049564 + Intergenic
N/A UCSC
Rps15aP27 chrX:156432252-156432705 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_053982.1
ACAGTCACCATGGTGCGAATGAATGTTCTGGCAGATGCTCTCAAGAGCATCAACAACGCGGAGAAGAGGGGCAAACGCCAGGTCCTCATCAGGCCGTGTTCCAAAGTCATCGTTCGGTTCCTAACTGTGATGATGAAGCATGGCTACATTGGTGAATTCGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGGAAGGTTGAACAAGTGTGGAGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTAGAGAAGTGGCAGAACAATCTGCTCCCATCACGGCAGTTTGGTTTCATTGTGCTGACGACCTCGGCTGGCATCATGGACCATGAAGAGGCAAGACGAAAACATACAGGAGGGAAAATCCTGGGATTCTTTTTTTAAATGTAAAGCATAAATAAAAAGCCTCTGTGGACTGTG
>XM_006230097.2
AATTCCGAGCGTTTGCTCCTCCCATTCTCTTTCTGCCATCTTCTCTCACCGTCACCATGGTGCGAATGAATGTTCTGGCAGATGCTCTCAAGAGCATCAACAACGCGGAGAAGAGGGGCAAACGCCAGGTCCTCATCAGGCCGTGTTCCAAAGTCATCGTTCGGTTCCTAACTGTGATGATGAAGCATGGCTACATTGGTGAATTCGAGATCATTGATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGGAAGGTTGAACAAGTGTGGAGTTATAAGCCCTAGATTTGATGTTCAACTCAAAGACCTAGAGAAGTGGCAGAACAATCTGCTCCCATCACGGCAGTTTGGTTTCATTGTGCTGACGACCTCGGCTGGCATCATGGACCATGAAGAGGCAAGACGAAAACATACAGGAGGGAAAATCCTGGGATTCTTTTTTTAAATGTAAAGCATAAATAAAAAGCCTCTGTGGACTGTG